RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 PREX2Q70Z35 1606 aa21.6■■□□□ 1.05
CCDC130-208ENST00000588071 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
CCDC130-208ENST00000588071 ARHGAP5Q13017 1502 aa21.59■■□□□ 1.05
CCDC130-208ENST00000588071 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
CCDC130-208ENST00000588071 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
CCDC130-208ENST00000588071 FAM50AQ14320 339 aaKnown RBP21.55■■□□□ 1.04
CCDC130-208ENST00000588071 PTPN23Q9H3S7 1636 aa21.54■■□□□ 1.04
CCDC130-208ENST00000588071 ARAP3Q8WWN8 1544 aa21.54■■□□□ 1.04
CCDC130-208ENST00000588071 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.03
CCDC130-208ENST00000588071 FANCAO15360 1455 aa21.52■■□□□ 1.03
CCDC130-208ENST00000588071 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
CCDC130-208ENST00000588071 CFAP74Q9C0B2 1584 aa21.49■■□□□ 1.03
CCDC130-208ENST00000588071 TEX14Q8IWB6 1497 aa21.49■■□□□ 1.03
CCDC130-208ENST00000588071 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
CCDC130-208ENST00000588071 TRIM26Q12899 539 aaPredicted RBP21.48■■□□□ 1.03
CCDC130-208ENST00000588071 AKNAQ7Z591 1439 aa21.47■■□□□ 1.03
CCDC130-208ENST00000588071 CAMSAP2Q08AD1 1489 aa21.47■■□□□ 1.03
CCDC130-208ENST00000588071 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
CCDC130-208ENST00000588071 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
CCDC130-208ENST00000588071 NEO1Q92859 1461 aa21.45■■□□□ 1.03
CCDC130-208ENST00000588071 HNRNPMP52272 730 aaKnown RBP eCLIP21.45■■□□□ 1.02
CCDC130-208ENST00000588071 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
CCDC130-208ENST00000588071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCDC130-208ENST00000588071 ITGAEP38570 1179 aa21.43■■□□□ 1.02
CCDC130-208ENST00000588071 ADGRL1O94910 1474 aa21.42■■□□□ 1.02
CCDC130-208ENST00000588071 RSPH4AQ5TD94 716 aa21.42■■□□□ 1.02
CCDC130-208ENST00000588071 KIAA1107Q9UPP5 1409 aa21.41■■□□□ 1.02
CCDC130-208ENST00000588071 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
CCDC130-208ENST00000588071 ABCC1P33527 1531 aa21.39■■□□□ 1.02
CCDC130-208ENST00000588071 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
CCDC130-208ENST00000588071 ARHGEF12Q9NZN5 1544 aa21.36■■□□□ 1.01
CCDC130-208ENST00000588071 TSPY4P0CV99 314 aa21.36■■□□□ 1.01
CCDC130-208ENST00000588071 TSPY10P0CW01 314 aa21.36■■□□□ 1.01
CCDC130-208ENST00000588071 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
CCDC130-208ENST00000588071 DNMT1P26358 1616 aaKnown RBP21.35■■□□□ 1.01
CCDC130-208ENST00000588071 ARHGEF5Q12774 1597 aa21.35■■□□□ 1.01
CCDC130-208ENST00000588071 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
CCDC130-208ENST00000588071 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
CCDC130-208ENST00000588071 ABCC5O15440 1437 aa21.33■■□□□ 1.01
CCDC130-208ENST00000588071 DAPK1P53355 1430 aa21.33■■□□□ 1.01
CCDC130-208ENST00000588071 TRAPPC8Q9Y2L5 1435 aa21.33■■□□□ 1.01
CCDC130-208ENST00000588071 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
CCDC130-208ENST00000588071 RAPGEF3O95398 923 aa21.32■■□□□ 1
CCDC130-208ENST00000588071 CHIC2Q9UKJ5 165 aa21.32■■□□□ 1
CCDC130-208ENST00000588071 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
CCDC130-208ENST00000588071 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
CCDC130-208ENST00000588071 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
CCDC130-208ENST00000588071 CROCC2H7BZ55 1655 aa21.28■■□□□ 1
CCDC130-208ENST00000588071 POGZQ7Z3K3 1410 aa21.28■■□□□ 1
CCDC130-208ENST00000588071 SPAG9O60271 1321 aaKnown RBP21.28■■□□□ 1
CCDC130-208ENST00000588071 RICTORQ6R327 1708 aa21.27■■□□□ 1
CCDC130-208ENST00000588071 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
CCDC130-208ENST00000588071 COL17A1Q9UMD9 1497 aaPredicted RBP21.25■□□□□ 0.99
CCDC130-208ENST00000588071 C9orf84Q5VXU9 1444 aa21.24■□□□□ 0.99
CCDC130-208ENST00000588071 KDM6BO15054 1643 aa21.24■□□□□ 0.99
CCDC130-208ENST00000588071 SHANK2Q9UPX8 1470 aa21.23■□□□□ 0.99
CCDC130-208ENST00000588071 ADGBQ8N7X0 1667 aa21.22■□□□□ 0.99
CCDC130-208ENST00000588071 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
CCDC130-208ENST00000588071 KDM5CP41229 1560 aa21.21■□□□□ 0.99
CCDC130-208ENST00000588071 MAST1Q9Y2H9 1570 aa21.21■□□□□ 0.99
CCDC130-208ENST00000588071 ANKRD30AQ9BXX3 1397 aa21.21■□□□□ 0.99
CCDC130-208ENST00000588071 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
CCDC130-208ENST00000588071 FRMPD1Q5SYB0 1578 aa21.2■□□□□ 0.98
CCDC130-208ENST00000588071 HECW2Q9P2P5 1572 aa21.19■□□□□ 0.98
CCDC130-208ENST00000588071 ROCK1Q13464 1354 aa21.18■□□□□ 0.98
CCDC130-208ENST00000588071 MLH3Q9UHC1 1453 aa21.18■□□□□ 0.98
CCDC130-208ENST00000588071 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
CCDC130-208ENST00000588071 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
CCDC130-208ENST00000588071 INO80Q9ULG1 1556 aaPredicted RBP21.16■□□□□ 0.98
CCDC130-208ENST00000588071 ADGRL2O95490 1459 aa21.16■□□□□ 0.98
CCDC130-208ENST00000588071 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
CCDC130-208ENST00000588071 ZFYVE16Q7Z3T8 1539 aa21.15■□□□□ 0.98
CCDC130-208ENST00000588071 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.98
CCDC130-208ENST00000588071 MAGI2Q86UL8 1455 aa21.14■□□□□ 0.98
CCDC130-208ENST00000588071 KIF15Q9NS87 1388 aa21.12■□□□□ 0.97
CCDC130-208ENST00000588071 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
CCDC130-208ENST00000588071 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CCDC130-208ENST00000588071 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
CCDC130-208ENST00000588071 YEATS2Q9ULM3 1422 aa21.09■□□□□ 0.97
CCDC130-208ENST00000588071 NAIPQ13075 1403 aa21.08■□□□□ 0.97
CCDC130-208ENST00000588071 GCC2Q8IWJ2 1684 aa21.08■□□□□ 0.96
CCDC130-208ENST00000588071 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.96
CCDC130-208ENST00000588071 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
CCDC130-208ENST00000588071 ATP10AO60312 1499 aa21.07■□□□□ 0.96
CCDC130-208ENST00000588071 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
CCDC130-208ENST00000588071 ANKRD50Q9ULJ7 1429 aa21.05■□□□□ 0.96
CCDC130-208ENST00000588071 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
CCDC130-208ENST00000588071 A2MP01023 1474 aa21.05■□□□□ 0.96
CCDC130-208ENST00000588071 ARHGEF40Q8TER5 1519 aa21.02■□□□□ 0.96
CCDC130-208ENST00000588071 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
CCDC130-208ENST00000588071 KIF3BO15066 747 aa21■□□□□ 0.95
CCDC130-208ENST00000588071 ERBINQ96RT1 1412 aa21■□□□□ 0.95
CCDC130-208ENST00000588071 HRCP23327 699 aa20.98■□□□□ 0.95
CCDC130-208ENST00000588071 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
CCDC130-208ENST00000588071 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
CCDC130-208ENST00000588071 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
CCDC130-208ENST00000588071 REREQ9P2R6 1566 aa20.95■□□□□ 0.94
CCDC130-208ENST00000588071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.95■□□□□ 0.941e-6■■□□□ 13
CCDC130-208ENST00000588071 EIF2AK4Q9P2K8 1649 aaKnown RBP20.95■□□□□ 0.94
CCDC130-208ENST00000588071 GGT6Q6P531 493 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms