RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 PLCH2O75038 1416 aa29.73■■■□□ 2.35
SOCS3-202ENST00000587578 SCAPERQ9BY12 1400 aa29.73■■■□□ 2.35
SOCS3-202ENST00000587578 HSPA2P54652 639 aa29.73■■■□□ 2.35
SOCS3-202ENST00000587578 FER1L4A9Z1Z3 1794 aa29.69■■■□□ 2.34
SOCS3-202ENST00000587578 MLECQ14165 292 aa29.69■■■□□ 2.34
SOCS3-202ENST00000587578 ARHGAP35Q9NRY4 1499 aa29.68■■■□□ 2.34
SOCS3-202ENST00000587578 MYO5CQ9NQX4 1742 aa29.67■■■□□ 2.34
SOCS3-202ENST00000587578 KIF14Q15058 1648 aa29.67■■■□□ 2.34
SOCS3-202ENST00000587578 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
SOCS3-202ENST00000587578 FMN1Q68DA7 1419 aa29.64■■■□□ 2.34
SOCS3-202ENST00000587578 ATP10AO60312 1499 aa29.61■■■□□ 2.33
SOCS3-202ENST00000587578 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
SOCS3-202ENST00000587578 LRRIQ1Q96JM4 1722 aa29.59■■■□□ 2.33
SOCS3-202ENST00000587578 EFCAB2Q5VUJ9 269 aa29.58■■■□□ 2.33
SOCS3-202ENST00000587578 C9orf84Q5VXU9 1444 aa29.58■■■□□ 2.33
SOCS3-202ENST00000587578 TROQ12816 1431 aaPredicted RBP29.54■■■□□ 2.32
SOCS3-202ENST00000587578 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
SOCS3-202ENST00000587578 ARHGAP5Q13017 1502 aa29.52■■■□□ 2.32
SOCS3-202ENST00000587578 ZNF518AQ6AHZ1 1483 aa29.52■■■□□ 2.32
SOCS3-202ENST00000587578 KDM5CP41229 1560 aa29.52■■■□□ 2.32
SOCS3-202ENST00000587578 CDK11AQ9UQ88 783 aaPredicted RBP29.51■■■□□ 2.31
SOCS3-202ENST00000587578 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
SOCS3-202ENST00000587578 CEBPAP49715 358 aaPredicted RBP29.49■■■□□ 2.31
SOCS3-202ENST00000587578 AFAP1Q8N556 730 aa29.48■■■□□ 2.31
SOCS3-202ENST00000587578 CDC42BPBQ9Y5S2 1711 aa29.47■■■□□ 2.31
SOCS3-202ENST00000587578 DIP2CQ9Y2E4 1556 aa29.47■■■□□ 2.31
SOCS3-202ENST00000587578 CLIP1P30622 1438 aa29.46■■■□□ 2.31
SOCS3-202ENST00000587578 ABCA6Q8N139 1617 aa29.42■■■□□ 2.3
SOCS3-202ENST00000587578 CERKQ8TCT0 537 aa29.42■■■□□ 2.3
SOCS3-202ENST00000587578 CEP162Q5TB80 1403 aa29.42■■■□□ 2.3
SOCS3-202ENST00000587578 PREX2Q70Z35 1606 aa29.39■■■□□ 2.3
SOCS3-202ENST00000587578 REREQ9P2R6 1566 aa29.38■■■□□ 2.29
SOCS3-202ENST00000587578 STRCQ7RTU9 1775 aa29.37■■■□□ 2.29
SOCS3-202ENST00000587578 TRAPPC8Q9Y2L5 1435 aa29.37■■■□□ 2.29
SOCS3-202ENST00000587578 ABCC1P33527 1531 aa29.36■■■□□ 2.29
SOCS3-202ENST00000587578 MYT1LQ9UL68 1186 aa29.36■■■□□ 2.29
SOCS3-202ENST00000587578 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
SOCS3-202ENST00000587578 ITSN2Q9NZM3 1697 aa29.34■■■□□ 2.29
SOCS3-202ENST00000587578 C3P01024 1663 aa29.32■■■□□ 2.28
SOCS3-202ENST00000587578 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
SOCS3-202ENST00000587578 CASKIN1Q8WXD9 1431 aa29.32■■■□□ 2.28
SOCS3-202ENST00000587578 CCDC18Q5T9S5 1454 aa29.31■■■□□ 2.28
SOCS3-202ENST00000587578 SETD1BQ9UPS6 1966 aaKnown RBP29.3■■■□□ 2.28
SOCS3-202ENST00000587578 CDC42BPAQ5VT25 1732 aa29.3■■■□□ 2.28
SOCS3-202ENST00000587578 KIDINS220Q9ULH0 1771 aa29.29■■■□□ 2.28
SOCS3-202ENST00000587578 AGLP35573 1532 aa29.28■■■□□ 2.28
SOCS3-202ENST00000587578 SAMD9LQ8IVG5 1584 aa29.19■■■□□ 2.26
SOCS3-202ENST00000587578 FYCO1Q9BQS8 1478 aa29.19■■■□□ 2.26
SOCS3-202ENST00000587578 DMRT2Q9Y5R5 561 aa29.19■■■□□ 2.26
SOCS3-202ENST00000587578 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
SOCS3-202ENST00000587578 ESF1Q9H501 851 aaKnown RBP29.15■■■□□ 2.26
SOCS3-202ENST00000587578 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.26
SOCS3-202ENST00000587578 PTPRTO14522 1441 aa29.12■■■□□ 2.25
SOCS3-202ENST00000587578 GPATCH8Q9UKJ3 1502 aaKnown RBP29.12■■■□□ 2.25
SOCS3-202ENST00000587578 CNTLNQ9NXG0 1405 aa29.11■■■□□ 2.25
SOCS3-202ENST00000587578 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
SOCS3-202ENST00000587578 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
SOCS3-202ENST00000587578 MROH2AA6NES4 1674 aa29.08■■■□□ 2.25
SOCS3-202ENST00000587578 HNRNPMP52272 730 aaKnown RBP eCLIP29.07■■■□□ 2.24
SOCS3-202ENST00000587578 NCOA1Q15788 1441 aa29.07■■■□□ 2.24
SOCS3-202ENST00000587578 LTBP4Q8N2S1 1624 aa29.06■■■□□ 2.24
SOCS3-202ENST00000587578 SPAG9O60271 1321 aaKnown RBP29.05■■■□□ 2.24
SOCS3-202ENST00000587578 ATP7AQ04656 1500 aa29.04■■■□□ 2.24
SOCS3-202ENST00000587578 INO80Q9ULG1 1556 aaPredicted RBP29.04■■■□□ 2.24
SOCS3-202ENST00000587578 NPATQ14207 1427 aa29.03■■■□□ 2.24
SOCS3-202ENST00000587578 PLXNC1O60486 1568 aa29.02■■■□□ 2.24
SOCS3-202ENST00000587578 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
SOCS3-202ENST00000587578 ZMYM3Q14202 1370 aa29.01■■■□□ 2.23
SOCS3-202ENST00000587578 CLTCQ00610 1675 aaKnown RBP29■■■□□ 2.23
SOCS3-202ENST00000587578 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
SOCS3-202ENST00000587578 DISP3Q9P2K9 1392 aa28.98■■■□□ 2.23
SOCS3-202ENST00000587578 CFDP1Q9UEE9 299 aaPredicted RBP28.97■■■□□ 2.23
SOCS3-202ENST00000587578 CCNB3Q8WWL7 1395 aa28.96■■■□□ 2.23
SOCS3-202ENST00000587578 A2MP01023 1474 aa28.96■■■□□ 2.23
SOCS3-202ENST00000587578 PLEKHH2Q8IVE3 1493 aa28.96■■■□□ 2.23
SOCS3-202ENST00000587578 ILDR2Q71H61 639 aa28.95■■■□□ 2.22
SOCS3-202ENST00000587578 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
SOCS3-202ENST00000587578 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
SOCS3-202ENST00000587578 NCKAP5LQ9HCH0 1330 aa28.91■■■□□ 2.22
SOCS3-202ENST00000587578 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
SOCS3-202ENST00000587578 TIAM1Q13009 1591 aa28.9■■■□□ 2.22
SOCS3-202ENST00000587578 PTPRKQ15262 1439 aa28.9■■■□□ 2.22
SOCS3-202ENST00000587578 IQSEC2Q5JU85 1478 aa28.9■■■□□ 2.22
SOCS3-202ENST00000587578 ZNF644Q9H582 1327 aaPredicted RBP28.89■■■□□ 2.21
SOCS3-202ENST00000587578 GGT6Q6P531 493 aa28.88■■■□□ 2.21
SOCS3-202ENST00000587578 ADGBQ8N7X0 1667 aa28.88■■■□□ 2.21
SOCS3-202ENST00000587578 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
SOCS3-202ENST00000587578 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
SOCS3-202ENST00000587578 SPATA31D1Q6ZQQ2 1576 aa28.85■■■□□ 2.21
SOCS3-202ENST00000587578 ZNF335Q9H4Z2 1342 aaPredicted RBP28.85■■■□□ 2.21
SOCS3-202ENST00000587578 PLA2R1Q13018 1463 aa28.84■■■□□ 2.21
SOCS3-202ENST00000587578 MBD5Q9P267 1494 aa28.84■■■□□ 2.21
SOCS3-202ENST00000587578 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
SOCS3-202ENST00000587578 EHBP1L1Q8N3D4 1523 aa28.82■■■□□ 2.2
SOCS3-202ENST00000587578 PKD2Q13563 968 aa28.76■■■□□ 2.19
SOCS3-202ENST00000587578 SOCS7O14512 581 aa28.74■■■□□ 2.19
SOCS3-202ENST00000587578 RTEL1-TNFRSF6BF6WH68 1400 aa28.74■■■□□ 2.19
SOCS3-202ENST00000587578 DNMT1P26358 1616 aaKnown RBP28.73■■■□□ 2.19
SOCS3-202ENST00000587578 PPP6R1Q9UPN7 881 aa28.73■■■□□ 2.19
SOCS3-202ENST00000587578 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms