RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 KCNV2Q8TDN2 545 aa6.79□□□□□ -1.32
LDLRAD4-209ENST00000587440 TMEM106CQ9BVX2 250 aa6.78□□□□□ -1.32
LDLRAD4-209ENST00000587440 DISP3Q9P2K9 1392 aa6.78□□□□□ -1.32
LDLRAD4-209ENST00000587440 KDM4FA0A1W2PPD8 638 aa6.77□□□□□ -1.33
LDLRAD4-209ENST00000587440 MRC2Q9UBG0 1479 aa6.77□□□□□ -1.33
LDLRAD4-209ENST00000587440 HECW2Q9P2P5 1572 aa6.77□□□□□ -1.33
LDLRAD4-209ENST00000587440 NCKAP5LQ9HCH0 1330 aa6.76□□□□□ -1.33
LDLRAD4-209ENST00000587440 TTLL13PA6NNM8 815 aa6.76□□□□□ -1.33
LDLRAD4-209ENST00000587440 EVX2Q03828 476 aa6.76□□□□□ -1.33
LDLRAD4-209ENST00000587440 TIE1P35590 1138 aa6.75□□□□□ -1.33
LDLRAD4-209ENST00000587440 BMP2KQ9NSY1 1161 aaPredicted RBP6.75□□□□□ -1.33
LDLRAD4-209ENST00000587440 RSF1Q96T23 1441 aaPredicted RBP6.75□□□□□ -1.33
LDLRAD4-209ENST00000587440 GALR2O43603 387 aaPredicted RBP6.74□□□□□ -1.33
LDLRAD4-209ENST00000587440 P3H3Q8IVL6 736 aa6.74□□□□□ -1.33
LDLRAD4-209ENST00000587440 HMGXB3Q12766 1538 aa6.72□□□□□ -1.33
LDLRAD4-209ENST00000587440 CRISPLD2Q9H0B8 497 aa6.72□□□□□ -1.33
LDLRAD4-209ENST00000587440 MFSD10Q14728 455 aa6.71□□□□□ -1.34
LDLRAD4-209ENST00000587440 WDR70Q9NW82 654 aa6.69□□□□□ -1.34
LDLRAD4-209ENST00000587440 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
LDLRAD4-209ENST00000587440 TRIM35Q9UPQ4 493 aa6.68□□□□□ -1.34
LDLRAD4-209ENST00000587440 SPATA31D1Q6ZQQ2 1576 aa6.68□□□□□ -1.34
LDLRAD4-209ENST00000587440 GOLGA2Q08379 1002 aa6.67□□□□□ -1.34
LDLRAD4-209ENST00000587440 MKRN3Q13064 507 aaKnown RBP6.67□□□□□ -1.34
LDLRAD4-209ENST00000587440 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
LDLRAD4-209ENST00000587440 ATN1P54259 1190 aaPredicted RBP6.66□□□□□ -1.34
LDLRAD4-209ENST00000587440 E2F4Q16254 413 aa6.66□□□□□ -1.34
LDLRAD4-209ENST00000587440 ASTLQ6HA08 431 aaPredicted RBP6.66□□□□□ -1.34
LDLRAD4-209ENST00000587440 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
LDLRAD4-209ENST00000587440 CAMK2BQ13554 666 aa6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 DPY19L2Q6NUT2 758 aa6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 ARIH1Q9Y4X5 557 aaPredicted RBP6.65□□□□□ -1.34
LDLRAD4-209ENST00000587440 ATMINO43313 823 aaPredicted RBP6.64□□□□□ -1.35
LDLRAD4-209ENST00000587440 CLCN6P51797 869 aa6.64□□□□□ -1.35
LDLRAD4-209ENST00000587440 IRX5P78411 483 aaPredicted RBP6.64□□□□□ -1.35
LDLRAD4-209ENST00000587440 LMOD2Q6P5Q4 547 aa6.64□□□□□ -1.35
LDLRAD4-209ENST00000587440 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
LDLRAD4-209ENST00000587440 DDX27Q96GQ7 796 aaKnown RBP6.63□□□□□ -1.35
LDLRAD4-209ENST00000587440 DCAF1Q9Y4B6 1507 aa6.63□□□□□ -1.35
LDLRAD4-209ENST00000587440 TESPA1A2RU30 521 aaPredicted RBP6.62□□□□□ -1.35
LDLRAD4-209ENST00000587440 GABBR2O75899 941 aa6.62□□□□□ -1.35
LDLRAD4-209ENST00000587440 PDE4AP27815 886 aa6.62□□□□□ -1.35
LDLRAD4-209ENST00000587440 MICALL2Q8IY33 904 aa6.62□□□□□ -1.35
LDLRAD4-209ENST00000587440 SEMA3EO15041 775 aa6.61□□□□□ -1.35
LDLRAD4-209ENST00000587440 TMEM121BQ9BXQ6 578 aaPredicted RBP6.61□□□□□ -1.35
LDLRAD4-209ENST00000587440 IER5LQ5T953 404 aa6.6□□□□□ -1.35
LDLRAD4-209ENST00000587440 GPHNQ9NQX3 736 aaPredicted RBP6.6□□□□□ -1.35
LDLRAD4-209ENST00000587440 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
LDLRAD4-209ENST00000587440 PELP1Q8IZL8 1130 aaKnown RBP6.58□□□□□ -1.36
LDLRAD4-209ENST00000587440 KIF3CO14782 793 aa6.57□□□□□ -1.36
LDLRAD4-209ENST00000587440 DSG2Q14126 1118 aa6.57□□□□□ -1.36
LDLRAD4-209ENST00000587440 OCEL1Q9H607 264 aa6.57□□□□□ -1.36
LDLRAD4-209ENST00000587440 EMILIN3Q9NT22 766 aa6.57□□□□□ -1.36
LDLRAD4-209ENST00000587440 ADGRL1O94910 1474 aa6.56□□□□□ -1.36
LDLRAD4-209ENST00000587440 CEP164Q9UPV0 1460 aa6.56□□□□□ -1.36
LDLRAD4-209ENST00000587440 KIF13AQ9H1H9 1805 aa6.55□□□□□ -1.36
LDLRAD4-209ENST00000587440 POTEFA5A3E0 1075 aa6.55□□□□□ -1.36
LDLRAD4-209ENST00000587440 FOXK1P85037 733 aa6.55□□□□□ -1.36
LDLRAD4-209ENST00000587440 ZC3H15Q8WU90 426 aaKnown RBP6.55□□□□□ -1.36
LDLRAD4-209ENST00000587440 COLQQ9Y215 455 aaPredicted RBP6.55□□□□□ -1.36
LDLRAD4-209ENST00000587440 CHD1O14646 1710 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 LHX8Q68G74 356 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 TMEM92Q6UXU6 159 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 BOLA1Q9Y3E2 137 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 KDM6BO15054 1643 aa6.54□□□□□ -1.36
LDLRAD4-209ENST00000587440 BAZ1BQ9UIG0 1483 aaKnown RBP6.53□□□□□ -1.36
LDLRAD4-209ENST00000587440 C2orf72A6NCS6 295 aa6.52□□□□□ -1.37
LDLRAD4-209ENST00000587440 POTEIP0CG38 1075 aa6.52□□□□□ -1.37
LDLRAD4-209ENST00000587440 TULP1O00294 542 aaPredicted RBP6.51□□□□□ -1.37
LDLRAD4-209ENST00000587440 MLLT3P42568 568 aaPredicted RBP6.51□□□□□ -1.37
LDLRAD4-209ENST00000587440 PDIA6Q15084 440 aa6.51□□□□□ -1.37
LDLRAD4-209ENST00000587440 DPYSL4O14531 572 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 PLCG2P16885 1265 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 BRPF1P55201 1214 aaPredicted RBP6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 TMEM132AQ24JP5 1023 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 TIMELESSQ9UNS1 1208 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 SMARCA4P51532 1647 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
LDLRAD4-209ENST00000587440 PLPP6Q8IY26 295 aa6.49□□□□□ -1.37
LDLRAD4-209ENST00000587440 TMC2Q8TDI7 906 aa6.49□□□□□ -1.37
LDLRAD4-209ENST00000587440 IFT140Q96RY7 1462 aa6.48□□□□□ -1.37
LDLRAD4-209ENST00000587440 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
LDLRAD4-209ENST00000587440 ZNF608Q9ULD9 1512 aaPredicted RBP6.48□□□□□ -1.37
LDLRAD4-209ENST00000587440 GAPVD1Q14C86 1478 aa6.47□□□□□ -1.37
LDLRAD4-209ENST00000587440 ZMYND10O75800 440 aa6.47□□□□□ -1.37
LDLRAD4-209ENST00000587440 GTF3C3Q9Y5Q9 886 aa6.47□□□□□ -1.37
LDLRAD4-209ENST00000587440 SPDYE16A6NNV3 312 aaPredicted RBP6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 GPR37O15354 613 aa6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 EIF4G3O43432 1585 aaKnown RBP6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 RBM26Q5T8P6 1007 aaKnown RBP6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 SLC39A7Q92504 469 aa6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 L3MBTL3Q96JM7 780 aaPredicted RBP6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 DCBLD2Q96PD2 775 aa6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 FANCD2Q9BXW9 1451 aa6.46□□□□□ -1.38
LDLRAD4-209ENST00000587440 C7P10643 843 aa6.45□□□□□ -1.38
LDLRAD4-209ENST00000587440 OXER1Q8TDS5 423 aa6.45□□□□□ -1.38
LDLRAD4-209ENST00000587440 METRNQ9UJH8 293 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms