RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 NEO1Q92859 1461 aa16.19■□□□□ 0.18
LAMA3-205ENST00000586709 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
LAMA3-205ENST00000586709 MYO5CQ9NQX4 1742 aa16.18■□□□□ 0.18
LAMA3-205ENST00000586709 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
LAMA3-205ENST00000586709 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
LAMA3-205ENST00000586709 KIF14Q15058 1648 aa16.16■□□□□ 0.18
LAMA3-205ENST00000586709 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
LAMA3-205ENST00000586709 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
LAMA3-205ENST00000586709 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
LAMA3-205ENST00000586709 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
LAMA3-205ENST00000586709 FRMPD1Q5SYB0 1578 aa16.13■□□□□ 0.17
LAMA3-205ENST00000586709 FANCAO15360 1455 aa16.12■□□□□ 0.17
LAMA3-205ENST00000586709 DSG3P32926 999 aa16.12■□□□□ 0.17
LAMA3-205ENST00000586709 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
LAMA3-205ENST00000586709 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
LAMA3-205ENST00000586709 PLCH2O75038 1416 aa16.08■□□□□ 0.16
LAMA3-205ENST00000586709 ADGRL1O94910 1474 aa16.08■□□□□ 0.16
LAMA3-205ENST00000586709 CDC42BPBQ9Y5S2 1711 aa16.08■□□□□ 0.16
LAMA3-205ENST00000586709 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
LAMA3-205ENST00000586709 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
LAMA3-205ENST00000586709 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
LAMA3-205ENST00000586709 CAPN15O75808 1086 aa16.06■□□□□ 0.16
LAMA3-205ENST00000586709 RAPGEF3O95398 923 aa16.06■□□□□ 0.16
LAMA3-205ENST00000586709 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
LAMA3-205ENST00000586709 CDC42BPAQ5VT25 1732 aa16.05■□□□□ 0.16
LAMA3-205ENST00000586709 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
LAMA3-205ENST00000586709 ARHGEF40Q8TER5 1519 aa16.04■□□□□ 0.16
LAMA3-205ENST00000586709 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
LAMA3-205ENST00000586709 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
LAMA3-205ENST00000586709 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
LAMA3-205ENST00000586709 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
LAMA3-205ENST00000586709 EFCAB2Q5VUJ9 269 aa15.99■□□□□ 0.15
LAMA3-205ENST00000586709 POGZQ7Z3K3 1410 aa15.99■□□□□ 0.15
LAMA3-205ENST00000586709 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
LAMA3-205ENST00000586709 ITSN2Q9NZM3 1697 aa15.97■□□□□ 0.15
LAMA3-205ENST00000586709 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
LAMA3-205ENST00000586709 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
LAMA3-205ENST00000586709 MAGI2Q86UL8 1455 aa15.96■□□□□ 0.14
LAMA3-205ENST00000586709 ABCC1P33527 1531 aa15.95■□□□□ 0.14
LAMA3-205ENST00000586709 EHBP1L1Q8N3D4 1523 aa15.95■□□□□ 0.14
LAMA3-205ENST00000586709 ADAMTSL3P82987 1691 aa15.95■□□□□ 0.14
LAMA3-205ENST00000586709 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
LAMA3-205ENST00000586709 ZNF518AQ6AHZ1 1483 aa15.94■□□□□ 0.14
LAMA3-205ENST00000586709 KDM5CP41229 1560 aa15.94■□□□□ 0.14
LAMA3-205ENST00000586709 SIGLEC1Q9BZZ2 1709 aa15.93■□□□□ 0.14
LAMA3-205ENST00000586709 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
LAMA3-205ENST00000586709 YEATS2Q9ULM3 1422 aa15.92■□□□□ 0.14
LAMA3-205ENST00000586709 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
LAMA3-205ENST00000586709 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
LAMA3-205ENST00000586709 HECW2Q9P2P5 1572 aa15.92■□□□□ 0.14
LAMA3-205ENST00000586709 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
LAMA3-205ENST00000586709 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
LAMA3-205ENST00000586709 MADDQ8WXG6 1647 aa15.89■□□□□ 0.13
LAMA3-205ENST00000586709 ARHGEF12Q9NZN5 1544 aa15.89■□□□□ 0.13
LAMA3-205ENST00000586709 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
LAMA3-205ENST00000586709 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
LAMA3-205ENST00000586709 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
LAMA3-205ENST00000586709 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
LAMA3-205ENST00000586709 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
LAMA3-205ENST00000586709 DIP2CQ9Y2E4 1556 aa15.86■□□□□ 0.13
LAMA3-205ENST00000586709 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 ATP10AO60312 1499 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 AFAP1Q8N556 730 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
LAMA3-205ENST00000586709 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
LAMA3-205ENST00000586709 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
LAMA3-205ENST00000586709 REREQ9P2R6 1566 aa15.83■□□□□ 0.13
LAMA3-205ENST00000586709 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.12
LAMA3-205ENST00000586709 MAP3K1Q13233 1512 aa15.83■□□□□ 0.12
LAMA3-205ENST00000586709 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
LAMA3-205ENST00000586709 PTPRMP28827 1452 aa15.82■□□□□ 0.12
LAMA3-205ENST00000586709 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
LAMA3-205ENST00000586709 LRRC9Q6ZRR7 1453 aa15.81■□□□□ 0.12
LAMA3-205ENST00000586709 KIAA1107Q9UPP5 1409 aa15.81■□□□□ 0.12
LAMA3-205ENST00000586709 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
LAMA3-205ENST00000586709 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
LAMA3-205ENST00000586709 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.12
LAMA3-205ENST00000586709 ATP7AQ04656 1500 aa15.77■□□□□ 0.11
LAMA3-205ENST00000586709 AGLP35573 1532 aa15.75■□□□□ 0.11
LAMA3-205ENST00000586709 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
LAMA3-205ENST00000586709 SPAG9O60271 1321 aaKnown RBP15.74■□□□□ 0.11
LAMA3-205ENST00000586709 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
LAMA3-205ENST00000586709 MLECQ14165 292 aa15.74■□□□□ 0.11
LAMA3-205ENST00000586709 ZNF644Q9H582 1327 aaPredicted RBP15.73■□□□□ 0.11
LAMA3-205ENST00000586709 MBD5Q9P267 1494 aa15.73■□□□□ 0.11
LAMA3-205ENST00000586709 PLXNC1O60486 1568 aa15.71■□□□□ 0.11
LAMA3-205ENST00000586709 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
LAMA3-205ENST00000586709 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
LAMA3-205ENST00000586709 APLP2Q06481 763 aa15.7■□□□□ 0.1
LAMA3-205ENST00000586709 CCDC141Q6ZP82 1450 aa15.7■□□□□ 0.1
LAMA3-205ENST00000586709 C3P01024 1663 aa15.68■□□□□ 0.1
LAMA3-205ENST00000586709 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
LAMA3-205ENST00000586709 A2MP01023 1474 aa15.67■□□□□ 0.1
LAMA3-205ENST00000586709 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
LAMA3-205ENST00000586709 SETD1BQ9UPS6 1966 aaKnown RBP15.66■□□□□ 0.1
LAMA3-205ENST00000586709 MIA2Q96PC5 1412 aa15.66■□□□□ 0.1
LAMA3-205ENST00000586709 MROH2AA6NES4 1674 aa15.66■□□□□ 0.1
LAMA3-205ENST00000586709 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms