RNA–Protein interactions for RNA: ENST00000586545.5

PIK3C3-204, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 1 (best) BASIC

Gene PIK3C3, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-204ENST00000586545 AKNAQ7Z591 1439 aa14.1□□□□□ -0.15
PIK3C3-204ENST00000586545 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
PIK3C3-204ENST00000586545 FANCAO15360 1455 aa14.09□□□□□ -0.15
PIK3C3-204ENST00000586545 DENND4BO75064 1496 aaPredicted RBP14.09□□□□□ -0.15
PIK3C3-204ENST00000586545 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
PIK3C3-204ENST00000586545 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
PIK3C3-204ENST00000586545 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
PIK3C3-204ENST00000586545 LRRIQ1Q96JM4 1722 aa14.06□□□□□ -0.16
PIK3C3-204ENST00000586545 MYO5CQ9NQX4 1742 aa14.06□□□□□ -0.16
PIK3C3-204ENST00000586545 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
PIK3C3-204ENST00000586545 HECW1Q76N89 1606 aa14.06□□□□□ -0.16
PIK3C3-204ENST00000586545 FER1L4A9Z1Z3 1794 aa14.05□□□□□ -0.16
PIK3C3-204ENST00000586545 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
PIK3C3-204ENST00000586545 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
PIK3C3-204ENST00000586545 ARID4BQ4LE39 1312 aaPredicted RBP14.03□□□□□ -0.16
PIK3C3-204ENST00000586545 KIF14Q15058 1648 aa14.02□□□□□ -0.17
PIK3C3-204ENST00000586545 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
PIK3C3-204ENST00000586545 PLCH2O75038 1416 aa14□□□□□ -0.17
PIK3C3-204ENST00000586545 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
PIK3C3-204ENST00000586545 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
PIK3C3-204ENST00000586545 ARHGAP35Q9NRY4 1499 aa14□□□□□ -0.17
PIK3C3-204ENST00000586545 FBXO41Q8TF61 875 aa13.98□□□□□ -0.17
PIK3C3-204ENST00000586545 SCAPERQ9BY12 1400 aa13.97□□□□□ -0.17
PIK3C3-204ENST00000586545 ARHGEF12Q9NZN5 1544 aa13.97□□□□□ -0.17
PIK3C3-204ENST00000586545 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
PIK3C3-204ENST00000586545 FMN1Q68DA7 1419 aa13.96□□□□□ -0.17
PIK3C3-204ENST00000586545 KDM5CP41229 1560 aa13.95□□□□□ -0.18
PIK3C3-204ENST00000586545 PREX1Q8TCU6 1659 aa13.94□□□□□ -0.18
PIK3C3-204ENST00000586545 ATP10AO60312 1499 aa13.93□□□□□ -0.18
PIK3C3-204ENST00000586545 C9orf84Q5VXU9 1444 aa13.93□□□□□ -0.18
PIK3C3-204ENST00000586545 HSPA2P54652 639 aa13.92□□□□□ -0.18
PIK3C3-204ENST00000586545 TROQ12816 1431 aaPredicted RBP13.92□□□□□ -0.18
PIK3C3-204ENST00000586545 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
PIK3C3-204ENST00000586545 DIP2CQ9Y2E4 1556 aa13.91□□□□□ -0.18
PIK3C3-204ENST00000586545 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
PIK3C3-204ENST00000586545 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
PIK3C3-204ENST00000586545 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 REREQ9P2R6 1566 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
PIK3C3-204ENST00000586545 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
PIK3C3-204ENST00000586545 MLECQ14165 292 aa13.89□□□□□ -0.19
PIK3C3-204ENST00000586545 EFCAB2Q5VUJ9 269 aa13.88□□□□□ -0.19
PIK3C3-204ENST00000586545 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
PIK3C3-204ENST00000586545 C3P01024 1663 aa13.87□□□□□ -0.19
PIK3C3-204ENST00000586545 ABCC1P33527 1531 aa13.87□□□□□ -0.19
PIK3C3-204ENST00000586545 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
PIK3C3-204ENST00000586545 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
PIK3C3-204ENST00000586545 CLIP1P30622 1438 aa13.86□□□□□ -0.19
PIK3C3-204ENST00000586545 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
PIK3C3-204ENST00000586545 AFAP1Q8N556 730 aa13.83□□□□□ -0.19
PIK3C3-204ENST00000586545 MLH3Q9UHC1 1453 aa13.83□□□□□ -0.19
PIK3C3-204ENST00000586545 CCDC18Q5T9S5 1454 aa13.83□□□□□ -0.2
PIK3C3-204ENST00000586545 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
PIK3C3-204ENST00000586545 AGLP35573 1532 aa13.82□□□□□ -0.2
PIK3C3-204ENST00000586545 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
PIK3C3-204ENST00000586545 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
PIK3C3-204ENST00000586545 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
PIK3C3-204ENST00000586545 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
PIK3C3-204ENST00000586545 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
PIK3C3-204ENST00000586545 FYCO1Q9BQS8 1478 aa13.78□□□□□ -0.2
PIK3C3-204ENST00000586545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.78□□□□□ -0.26e-7■■□□□ 14.2
PIK3C3-204ENST00000586545 MROH2AA6NES4 1674 aa13.77□□□□□ -0.2
PIK3C3-204ENST00000586545 UHRF1BP1Q6BDS2 1440 aa13.77□□□□□ -0.21
PIK3C3-204ENST00000586545 SUPT6HQ7KZ85 1726 aaKnown RBP13.76□□□□□ -0.21
PIK3C3-204ENST00000586545 SYCP2Q9BX26 1530 aa13.75□□□□□ -0.21
PIK3C3-204ENST00000586545 DSG3P32926 999 aa13.74□□□□□ -0.21
PIK3C3-204ENST00000586545 INO80Q9ULG1 1556 aaPredicted RBP13.74□□□□□ -0.21
PIK3C3-204ENST00000586545 GPATCH8Q9UKJ3 1502 aaKnown RBP13.73□□□□□ -0.21
PIK3C3-204ENST00000586545 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
PIK3C3-204ENST00000586545 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
PIK3C3-204ENST00000586545 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
PIK3C3-204ENST00000586545 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
PIK3C3-204ENST00000586545 ATP7AQ04656 1500 aa13.71□□□□□ -0.22
PIK3C3-204ENST00000586545 PTPRTO14522 1441 aa13.7□□□□□ -0.22
PIK3C3-204ENST00000586545 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
PIK3C3-204ENST00000586545 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
PIK3C3-204ENST00000586545 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
PIK3C3-204ENST00000586545 NCOA1Q15788 1441 aa13.68□□□□□ -0.22
PIK3C3-204ENST00000586545 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
PIK3C3-204ENST00000586545 ADGBQ8N7X0 1667 aa13.68□□□□□ -0.22
PIK3C3-204ENST00000586545 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
PIK3C3-204ENST00000586545 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
PIK3C3-204ENST00000586545 NPATQ14207 1427 aa13.66□□□□□ -0.22
PIK3C3-204ENST00000586545 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
PIK3C3-204ENST00000586545 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
PIK3C3-204ENST00000586545 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.23
PIK3C3-204ENST00000586545 HNRNPMP52272 730 aaKnown RBP eCLIP13.64□□□□□ -0.23
PIK3C3-204ENST00000586545 SPAG9O60271 1321 aaKnown RBP13.64□□□□□ -0.23
PIK3C3-204ENST00000586545 A2MP01023 1474 aa13.64□□□□□ -0.23
PIK3C3-204ENST00000586545 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
PIK3C3-204ENST00000586545 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
PIK3C3-204ENST00000586545 IQSEC2Q5JU85 1478 aa13.62□□□□□ -0.23
PIK3C3-204ENST00000586545 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
PIK3C3-204ENST00000586545 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
PIK3C3-204ENST00000586545 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
PIK3C3-204ENST00000586545 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
PIK3C3-204ENST00000586545 MBD5Q9P267 1494 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms