RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 ARAP3Q8WWN8 1544 aa26.59■■□□□ 1.85
AP3D1-204ENST00000586177 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
AP3D1-204ENST00000586177 NCOA2Q15596 1464 aa26.58■■□□□ 1.85
AP3D1-204ENST00000586177 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
AP3D1-204ENST00000586177 RAPGEF3O95398 923 aa26.55■■□□□ 1.84
AP3D1-204ENST00000586177 SUPT6HQ7KZ85 1726 aaKnown RBP26.54■■□□□ 1.84
AP3D1-204ENST00000586177 CFAP74Q9C0B2 1584 aa26.54■■□□□ 1.84
AP3D1-204ENST00000586177 SCAPERQ9BY12 1400 aa26.52■■□□□ 1.84
AP3D1-204ENST00000586177 PREX2Q70Z35 1606 aa26.5■■□□□ 1.83
AP3D1-204ENST00000586177 ADGRL1O94910 1474 aa26.5■■□□□ 1.83
AP3D1-204ENST00000586177 CDC42BPBQ9Y5S2 1711 aa26.5■■□□□ 1.83
AP3D1-204ENST00000586177 DENND4BO75064 1496 aaPredicted RBP26.49■■□□□ 1.83
AP3D1-204ENST00000586177 CDC42BPAQ5VT25 1732 aa26.49■■□□□ 1.83
AP3D1-204ENST00000586177 PPARGC1BQ86YN6 1023 aaKnown RBP26.46■■□□□ 1.83
AP3D1-204ENST00000586177 ZNF644Q9H582 1327 aaPredicted RBP26.43■■□□□ 1.82
AP3D1-204ENST00000586177 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
AP3D1-204ENST00000586177 AFAP1Q8N556 730 aa26.42■■□□□ 1.82
AP3D1-204ENST00000586177 ITSN2Q9NZM3 1697 aa26.4■■□□□ 1.82
AP3D1-204ENST00000586177 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.82
AP3D1-204ENST00000586177 POGZQ7Z3K3 1410 aa26.39■■□□□ 1.81
AP3D1-204ENST00000586177 PLEKHH2Q8IVE3 1493 aa26.38■■□□□ 1.81
AP3D1-204ENST00000586177 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
AP3D1-204ENST00000586177 SAMD9LQ8IVG5 1584 aa26.37■■□□□ 1.81
AP3D1-204ENST00000586177 KIAA1107Q9UPP5 1409 aa26.37■■□□□ 1.81
AP3D1-204ENST00000586177 ABCC1P33527 1531 aa26.36■■□□□ 1.81
AP3D1-204ENST00000586177 MIA2Q96PC5 1412 aa26.35■■□□□ 1.81
AP3D1-204ENST00000586177 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
AP3D1-204ENST00000586177 FRMPD1Q5SYB0 1578 aa26.34■■□□□ 1.81
AP3D1-204ENST00000586177 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
AP3D1-204ENST00000586177 ZNF518AQ6AHZ1 1483 aa26.34■■□□□ 1.81
AP3D1-204ENST00000586177 RICTORQ6R327 1708 aa26.32■■□□□ 1.8
AP3D1-204ENST00000586177 SYCP2Q9BX26 1530 aa26.31■■□□□ 1.8
AP3D1-204ENST00000586177 CAMSAP2Q08AD1 1489 aa26.3■■□□□ 1.8
AP3D1-204ENST00000586177 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
AP3D1-204ENST00000586177 MAGI2Q86UL8 1455 aa26.28■■□□□ 1.8
AP3D1-204ENST00000586177 FGD6Q6ZV73 1430 aa26.27■■□□□ 1.8
AP3D1-204ENST00000586177 MBD5Q9P267 1494 aa26.27■■□□□ 1.8
AP3D1-204ENST00000586177 ZMYM4Q5VZL5 1548 aa26.26■■□□□ 1.79
AP3D1-204ENST00000586177 SPAG9O60271 1321 aaKnown RBP26.26■■□□□ 1.79
AP3D1-204ENST00000586177 YEATS2Q9ULM3 1422 aa26.23■■□□□ 1.79
AP3D1-204ENST00000586177 KDM5CP41229 1560 aa26.23■■□□□ 1.79
AP3D1-204ENST00000586177 MLH3Q9UHC1 1453 aa26.22■■□□□ 1.79
AP3D1-204ENST00000586177 ZFYVE16Q7Z3T8 1539 aa26.21■■□□□ 1.79
AP3D1-204ENST00000586177 TSPY4P0CV99 314 aa26.21■■□□□ 1.79
AP3D1-204ENST00000586177 TSPY10P0CW01 314 aa26.21■■□□□ 1.79
AP3D1-204ENST00000586177 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
AP3D1-204ENST00000586177 CCDC141Q6ZP82 1450 aa26.18■■□□□ 1.78
AP3D1-204ENST00000586177 PTPN23Q9H3S7 1636 aa26.18■■□□□ 1.78
AP3D1-204ENST00000586177 TCOF1Q13428 1488 aaKnown RBP26.17■■□□□ 1.78
AP3D1-204ENST00000586177 ARID4BQ4LE39 1312 aaPredicted RBP26.16■■□□□ 1.78
AP3D1-204ENST00000586177 ATP10AO60312 1499 aa26.16■■□□□ 1.78
AP3D1-204ENST00000586177 HECW2Q9P2P5 1572 aa26.16■■□□□ 1.78
AP3D1-204ENST00000586177 ARHGEF40Q8TER5 1519 aa26.15■■□□□ 1.78
AP3D1-204ENST00000586177 ARHGEF5Q12774 1597 aa26.14■■□□□ 1.78
AP3D1-204ENST00000586177 RTEL1-TNFRSF6BF6WH68 1400 aa26.12■■□□□ 1.77
AP3D1-204ENST00000586177 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
AP3D1-204ENST00000586177 ABCC5O15440 1437 aa26.09■■□□□ 1.77
AP3D1-204ENST00000586177 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
AP3D1-204ENST00000586177 KIDINS220Q9ULH0 1771 aa26.09■■□□□ 1.77
AP3D1-204ENST00000586177 DIP2CQ9Y2E4 1556 aa26.07■■□□□ 1.76
AP3D1-204ENST00000586177 DAPK1P53355 1430 aa26.05■■□□□ 1.76
AP3D1-204ENST00000586177 INO80Q9ULG1 1556 aaPredicted RBP26.05■■□□□ 1.76
AP3D1-204ENST00000586177 ABCA6Q8N139 1617 aa26.04■■□□□ 1.76
AP3D1-204ENST00000586177 KDM4FA0A1W2PPD8 638 aa26.04■■□□□ 1.76
AP3D1-204ENST00000586177 CHIC2Q9UKJ5 165 aa26.03■■□□□ 1.76
AP3D1-204ENST00000586177 MLECQ14165 292 aa26.02■■□□□ 1.76
AP3D1-204ENST00000586177 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.02■■□□□ 1.76
AP3D1-204ENST00000586177 A2MP01023 1474 aa26■■□□□ 1.75
AP3D1-204ENST00000586177 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
AP3D1-204ENST00000586177 ITGAEP38570 1179 aa26■■□□□ 1.75
AP3D1-204ENST00000586177 DNMT1P26358 1616 aaKnown RBP25.99■■□□□ 1.75
AP3D1-204ENST00000586177 MAST1Q9Y2H9 1570 aa25.99■■□□□ 1.75
AP3D1-204ENST00000586177 DHX29Q7Z478 1369 aaKnown RBP25.98■■□□□ 1.75
AP3D1-204ENST00000586177 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
AP3D1-204ENST00000586177 SHANK2Q9UPX8 1470 aa25.98■■□□□ 1.75
AP3D1-204ENST00000586177 REREQ9P2R6 1566 aa25.97■■□□□ 1.75
AP3D1-204ENST00000586177 SIGLEC1Q9BZZ2 1709 aa25.94■■□□□ 1.74
AP3D1-204ENST00000586177 ANKRD30AQ9BXX3 1397 aa25.94■■□□□ 1.74
AP3D1-204ENST00000586177 AGLP35573 1532 aa25.93■■□□□ 1.74
AP3D1-204ENST00000586177 PTPRKQ15262 1439 aa25.91■■□□□ 1.74
AP3D1-204ENST00000586177 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
AP3D1-204ENST00000586177 KIF15Q9NS87 1388 aa25.91■■□□□ 1.74
AP3D1-204ENST00000586177 KIF3BO15066 747 aa25.9■■□□□ 1.74
AP3D1-204ENST00000586177 CROCC2H7BZ55 1655 aa25.9■■□□□ 1.74
AP3D1-204ENST00000586177 NCOA1Q15788 1441 aa25.89■■□□□ 1.74
AP3D1-204ENST00000586177 GGT6Q6P531 493 aa25.89■■□□□ 1.74
AP3D1-204ENST00000586177 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
AP3D1-204ENST00000586177 PLXNC1O60486 1568 aa25.87■■□□□ 1.73
AP3D1-204ENST00000586177 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
AP3D1-204ENST00000586177 ESF1Q9H501 851 aaKnown RBP25.85■■□□□ 1.73
AP3D1-204ENST00000586177 ADGRL2O95490 1459 aa25.85■■□□□ 1.73
AP3D1-204ENST00000586177 DUOX2Q9NRD8 1548 aa25.84■■□□□ 1.73
AP3D1-204ENST00000586177 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
AP3D1-204ENST00000586177 ROCK1Q13464 1354 aa25.82■■□□□ 1.72
AP3D1-204ENST00000586177 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
AP3D1-204ENST00000586177 ERBINQ96RT1 1412 aa25.78■■□□□ 1.72
AP3D1-204ENST00000586177 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
AP3D1-204ENST00000586177 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
AP3D1-204ENST00000586177 PTPRMP28827 1452 aa25.74■■□□□ 1.71
AP3D1-204ENST00000586177 ANKRD50Q9ULJ7 1429 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms