RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 DENND4BO75064 1496 aaPredicted RBP35.47■■■■□ 3.27
NPHS1-203ENST00000585400 PREX2Q70Z35 1606 aa35.45■■■■□ 3.27
NPHS1-203ENST00000585400 CDC42BPBQ9Y5S2 1711 aa35.43■■■■□ 3.26
NPHS1-203ENST00000585400 FRMPD1Q5SYB0 1578 aa35.42■■■■□ 3.26
NPHS1-203ENST00000585400 SCAPERQ9BY12 1400 aa35.42■■■■□ 3.26
NPHS1-203ENST00000585400 GPATCH8Q9UKJ3 1502 aaKnown RBP35.41■■■■□ 3.26
NPHS1-203ENST00000585400 CDC42BPAQ5VT25 1732 aa35.4■■■■□ 3.26
NPHS1-203ENST00000585400 CCNB3Q8WWL7 1395 aa35.4■■■■□ 3.26
NPHS1-203ENST00000585400 MAP3K1Q13233 1512 aa35.4■■■■□ 3.26
NPHS1-203ENST00000585400 LRRC9Q6ZRR7 1453 aa35.38■■■■□ 3.25
NPHS1-203ENST00000585400 APLP2Q06481 763 aa35.36■■■■□ 3.25
NPHS1-203ENST00000585400 RICTORQ6R327 1708 aa35.35■■■■□ 3.25
NPHS1-203ENST00000585400 POGZQ7Z3K3 1410 aa35.33■■■■□ 3.25
NPHS1-203ENST00000585400 KANK4Q5T7N3 995 aaPredicted RBP35.33■■■■□ 3.25
NPHS1-203ENST00000585400 ZNF777Q9ULD5 760 aaPredicted RBP35.32■■■■□ 3.24
NPHS1-203ENST00000585400 NCOA2Q15596 1464 aa35.32■■■■□ 3.24
NPHS1-203ENST00000585400 SUPT6HQ7KZ85 1726 aaKnown RBP35.32■■■■□ 3.24
NPHS1-203ENST00000585400 CFDP1Q9UEE9 299 aaPredicted RBP35.31■■■■□ 3.24
NPHS1-203ENST00000585400 ABCC1P33527 1531 aa35.27■■■■□ 3.24
NPHS1-203ENST00000585400 ZMYM4Q5VZL5 1548 aa35.25■■■■□ 3.23
NPHS1-203ENST00000585400 SAMD9LQ8IVG5 1584 aa35.23■■■■□ 3.23
NPHS1-203ENST00000585400 ARHGEF12Q9NZN5 1544 aa35.22■■■■□ 3.23
NPHS1-203ENST00000585400 ITSN2Q9NZM3 1697 aa35.22■■■■□ 3.23
NPHS1-203ENST00000585400 AFAP1Q8N556 730 aa35.22■■■■□ 3.23
NPHS1-203ENST00000585400 ZNF518AQ6AHZ1 1483 aa35.22■■■■□ 3.23
NPHS1-203ENST00000585400 ARHGEF40Q8TER5 1519 aa35.18■■■■□ 3.22
NPHS1-203ENST00000585400 MAGI2Q86UL8 1455 aa35.18■■■■□ 3.22
NPHS1-203ENST00000585400 TRAPPC8Q9Y2L5 1435 aa35.18■■■■□ 3.22
NPHS1-203ENST00000585400 ZFYVE16Q7Z3T8 1539 aa35.16■■■■□ 3.22
NPHS1-203ENST00000585400 YEATS2Q9ULM3 1422 aa35.16■■■■□ 3.22
NPHS1-203ENST00000585400 SYCP2Q9BX26 1530 aa35.15■■■■□ 3.22
NPHS1-203ENST00000585400 PLEKHH2Q8IVE3 1493 aa35.15■■■■□ 3.22
NPHS1-203ENST00000585400 ZNF644Q9H582 1327 aaPredicted RBP35.14■■■■□ 3.22
NPHS1-203ENST00000585400 KDM5CP41229 1560 aa35.14■■■■□ 3.22
NPHS1-203ENST00000585400 HNRNPMP52272 730 aaKnown RBP eCLIP35.14■■■■□ 3.22
NPHS1-203ENST00000585400 KIAA1107Q9UPP5 1409 aa35.12■■■■□ 3.21
NPHS1-203ENST00000585400 MYT1LQ9UL68 1186 aa35.11■■■■□ 3.21
NPHS1-203ENST00000585400 HECW2Q9P2P5 1572 aa35.06■■■■□ 3.2
NPHS1-203ENST00000585400 ARID4BQ4LE39 1312 aaPredicted RBP35.05■■■■□ 3.2
NPHS1-203ENST00000585400 MLH3Q9UHC1 1453 aa35.03■■■■□ 3.2
NPHS1-203ENST00000585400 MYOM3Q5VTT5 1437 aa35.03■■■■□ 3.2
NPHS1-203ENST00000585400 CAMSAP2Q08AD1 1489 aa35.03■■■■□ 3.2
NPHS1-203ENST00000585400 ATP10AO60312 1499 aa35.01■■■■□ 3.19
NPHS1-203ENST00000585400 MBD5Q9P267 1494 aa34.99■■■■□ 3.19
NPHS1-203ENST00000585400 SPAG9O60271 1321 aaKnown RBP34.99■■■■□ 3.19
NPHS1-203ENST00000585400 C9orf84Q5VXU9 1444 aa34.97■■■■□ 3.19
NPHS1-203ENST00000585400 MIA2Q96PC5 1412 aa34.96■■■■□ 3.19
NPHS1-203ENST00000585400 DIP2CQ9Y2E4 1556 aa34.95■■■■□ 3.18
NPHS1-203ENST00000585400 BCORL1Q5H9F3 1711 aa34.94■■■■□ 3.18
NPHS1-203ENST00000585400 ADAMTSL3P82987 1691 aa34.93■■■■□ 3.18
NPHS1-203ENST00000585400 KIDINS220Q9ULH0 1771 aa34.92■■■■□ 3.18
NPHS1-203ENST00000585400 ABCA6Q8N139 1617 aa34.92■■■■□ 3.18
NPHS1-203ENST00000585400 SIGLEC1Q9BZZ2 1709 aa34.91■■■■□ 3.18
NPHS1-203ENST00000585400 CCDC141Q6ZP82 1450 aa34.89■■■■□ 3.18
NPHS1-203ENST00000585400 ATP7AQ04656 1500 aa34.88■■■■□ 3.17
NPHS1-203ENST00000585400 MADDQ8WXG6 1647 aa34.88■■■■□ 3.17
NPHS1-203ENST00000585400 INO80Q9ULG1 1556 aaPredicted RBP34.87■■■■□ 3.17
NPHS1-203ENST00000585400 RSPH4AQ5TD94 716 aa34.86■■■■□ 3.17
NPHS1-203ENST00000585400 PTPRMP28827 1452 aa34.84■■■■□ 3.17
NPHS1-203ENST00000585400 FGD6Q6ZV73 1430 aa34.84■■■■□ 3.17
NPHS1-203ENST00000585400 ARHGEF5Q12774 1597 aa34.83■■■■□ 3.17
NPHS1-203ENST00000585400 MLECQ14165 292 aa34.83■■■■□ 3.17
NPHS1-203ENST00000585400 REREQ9P2R6 1566 aa34.83■■■■□ 3.17
NPHS1-203ENST00000585400 PPARGC1BQ86YN6 1023 aaKnown RBP34.82■■■■□ 3.16
NPHS1-203ENST00000585400 PTPN23Q9H3S7 1636 aa34.8■■■■□ 3.16
NPHS1-203ENST00000585400 RTEL1-TNFRSF6BF6WH68 1400 aa34.79■■■■□ 3.16
NPHS1-203ENST00000585400 RIMS1Q86UR5 1692 aaKnown RBP34.77■■■■□ 3.16
NPHS1-203ENST00000585400 TSPY4P0CV99 314 aa34.76■■■■□ 3.16
NPHS1-203ENST00000585400 TSPY10P0CW01 314 aa34.76■■■■□ 3.16
NPHS1-203ENST00000585400 TCOF1Q13428 1488 aaKnown RBP34.73■■■■□ 3.15
NPHS1-203ENST00000585400 AGLP35573 1532 aa34.73■■■■□ 3.15
NPHS1-203ENST00000585400 A2MP01023 1474 aa34.72■■■■□ 3.15
NPHS1-203ENST00000585400 PLPPR3Q6T4P5 718 aa34.68■■■■□ 3.14
NPHS1-203ENST00000585400 ADGBQ8N7X0 1667 aa34.66■■■■□ 3.14
NPHS1-203ENST00000585400 PLXNC1O60486 1568 aa34.66■■■■□ 3.14
NPHS1-203ENST00000585400 MAST1Q9Y2H9 1570 aa34.65■■■■□ 3.14
NPHS1-203ENST00000585400 ABCC5O15440 1437 aa34.64■■■■□ 3.14
NPHS1-203ENST00000585400 FAM50AQ14320 339 aaKnown RBP34.64■■■■□ 3.14
NPHS1-203ENST00000585400 FER1L4A9Z1Z3 1794 aa34.64■■■■□ 3.14
NPHS1-203ENST00000585400 DAPK1P53355 1430 aa34.62■■■■□ 3.13
NPHS1-203ENST00000585400 DHX29Q7Z478 1369 aaKnown RBP34.61■■■■□ 3.13
NPHS1-203ENST00000585400 DNMT1P26358 1616 aaKnown RBP34.6■■■■□ 3.13
NPHS1-203ENST00000585400 SHANK2Q9UPX8 1470 aa34.58■■■■□ 3.13
NPHS1-203ENST00000585400 CROCC2H7BZ55 1655 aa34.56■■■■□ 3.12
NPHS1-203ENST00000585400 ESF1Q9H501 851 aaKnown RBP34.52■■■■□ 3.12
NPHS1-203ENST00000585400 GGT6Q6P531 493 aa34.51■■■■□ 3.12
NPHS1-203ENST00000585400 CHIC2Q9UKJ5 165 aa34.5■■■■□ 3.11
NPHS1-203ENST00000585400 KIF3BO15066 747 aa34.49■■■■□ 3.11
NPHS1-203ENST00000585400 LMTK3Q96Q04 1460 aa34.47■■■■□ 3.11
NPHS1-203ENST00000585400 KIF15Q9NS87 1388 aa34.46■■■■□ 3.11
NPHS1-203ENST00000585400 RRP7BPQ9NSQ0 103 aa34.45■■■■□ 3.11
NPHS1-203ENST00000585400 CNTLNQ9NXG0 1405 aa34.43■■■■□ 3.1
NPHS1-203ENST00000585400 DUOX2Q9NRD8 1548 aa34.42■■■■□ 3.1
NPHS1-203ENST00000585400 ANKRD30AQ9BXX3 1397 aa34.42■■■■□ 3.1
NPHS1-203ENST00000585400 CEBPAP49715 358 aaPredicted RBP34.42■■■■□ 3.1
NPHS1-203ENST00000585400 PPP6R1Q9UPN7 881 aa34.38■■■■□ 3.09
NPHS1-203ENST00000585400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.37■■■■□ 3.09
NPHS1-203ENST00000585400 NCOA1Q15788 1441 aa34.37■■■■□ 3.09
NPHS1-203ENST00000585400 ADGRL2O95490 1459 aa34.36■■■■□ 3.09
NPHS1-203ENST00000585400 PTPRKQ15262 1439 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms