RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
CHAF1A-202ENST00000585371 PLCH2O75038 1416 aa20.95■□□□□ 0.94
CHAF1A-202ENST00000585371 NCOA2Q15596 1464 aa20.92■□□□□ 0.94
CHAF1A-202ENST00000585371 GPATCH8Q9UKJ3 1502 aaKnown RBP20.92■□□□□ 0.94
CHAF1A-202ENST00000585371 APLP2Q06481 763 aa20.9■□□□□ 0.94
CHAF1A-202ENST00000585371 CFAP74Q9C0B2 1584 aa20.88■□□□□ 0.93
CHAF1A-202ENST00000585371 FANCAO15360 1455 aa20.88■□□□□ 0.93
CHAF1A-202ENST00000585371 ITSN2Q9NZM3 1697 aa20.87■□□□□ 0.93
CHAF1A-202ENST00000585371 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
CHAF1A-202ENST00000585371 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
CHAF1A-202ENST00000585371 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
CHAF1A-202ENST00000585371 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
CHAF1A-202ENST00000585371 ARHGAP5Q13017 1502 aa20.84■□□□□ 0.93
CHAF1A-202ENST00000585371 AKNAQ7Z591 1439 aa20.83■□□□□ 0.93
CHAF1A-202ENST00000585371 SAMD9LQ8IVG5 1584 aa20.82■□□□□ 0.92
CHAF1A-202ENST00000585371 ILDR1Q86SU0 546 aaPredicted RBP20.82■□□□□ 0.92
CHAF1A-202ENST00000585371 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
CHAF1A-202ENST00000585371 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
CHAF1A-202ENST00000585371 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
CHAF1A-202ENST00000585371 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
CHAF1A-202ENST00000585371 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
CHAF1A-202ENST00000585371 PTPRMP28827 1452 aa20.8■□□□□ 0.92
CHAF1A-202ENST00000585371 ABCC1P33527 1531 aa20.78■□□□□ 0.92
CHAF1A-202ENST00000585371 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
CHAF1A-202ENST00000585371 ARHGEF12Q9NZN5 1544 aa20.77■□□□□ 0.92
CHAF1A-202ENST00000585371 ARID4BQ4LE39 1312 aaPredicted RBP20.76■□□□□ 0.91
CHAF1A-202ENST00000585371 ZMYM4Q5VZL5 1548 aa20.75■□□□□ 0.91
CHAF1A-202ENST00000585371 CFDP1Q9UEE9 299 aaPredicted RBP20.75■□□□□ 0.91
CHAF1A-202ENST00000585371 MADDQ8WXG6 1647 aa20.75■□□□□ 0.91
CHAF1A-202ENST00000585371 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
CHAF1A-202ENST00000585371 SCAPERQ9BY12 1400 aa20.73■□□□□ 0.91
CHAF1A-202ENST00000585371 MIA2Q96PC5 1412 aa20.72■□□□□ 0.91
CHAF1A-202ENST00000585371 ZNF644Q9H582 1327 aaPredicted RBP20.72■□□□□ 0.91
CHAF1A-202ENST00000585371 SYCP2Q9BX26 1530 aa20.71■□□□□ 0.91
CHAF1A-202ENST00000585371 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
CHAF1A-202ENST00000585371 MAGI2Q86UL8 1455 aa20.7■□□□□ 0.9
CHAF1A-202ENST00000585371 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
CHAF1A-202ENST00000585371 KIAA1107Q9UPP5 1409 aa20.7■□□□□ 0.9
CHAF1A-202ENST00000585371 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 PTPN23Q9H3S7 1636 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 ZNF777Q9ULD5 760 aaPredicted RBP20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 TRAPPC8Q9Y2L5 1435 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
CHAF1A-202ENST00000585371 KDM5CP41229 1560 aa20.68■□□□□ 0.9
CHAF1A-202ENST00000585371 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
CHAF1A-202ENST00000585371 TCOF1Q13428 1488 aaKnown RBP20.67■□□□□ 0.9
CHAF1A-202ENST00000585371 ARHGEF5Q12774 1597 aa20.64■□□□□ 0.9
CHAF1A-202ENST00000585371 ZNF518AQ6AHZ1 1483 aa20.64■□□□□ 0.89
CHAF1A-202ENST00000585371 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.89
CHAF1A-202ENST00000585371 YEATS2Q9ULM3 1422 aa20.63■□□□□ 0.89
CHAF1A-202ENST00000585371 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
CHAF1A-202ENST00000585371 KIDINS220Q9ULH0 1771 aa20.61■□□□□ 0.89
CHAF1A-202ENST00000585371 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
CHAF1A-202ENST00000585371 SIGLEC1Q9BZZ2 1709 aa20.6■□□□□ 0.89
CHAF1A-202ENST00000585371 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
CHAF1A-202ENST00000585371 INO80Q9ULG1 1556 aaPredicted RBP20.58■□□□□ 0.88
CHAF1A-202ENST00000585371 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
CHAF1A-202ENST00000585371 DNMT1P26358 1616 aaKnown RBP20.57■□□□□ 0.88
CHAF1A-202ENST00000585371 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
CHAF1A-202ENST00000585371 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
CHAF1A-202ENST00000585371 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
CHAF1A-202ENST00000585371 ATP10AO60312 1499 aa20.56■□□□□ 0.88
CHAF1A-202ENST00000585371 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
CHAF1A-202ENST00000585371 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
CHAF1A-202ENST00000585371 DIP2CQ9Y2E4 1556 aa20.54■□□□□ 0.88
CHAF1A-202ENST00000585371 MAST1Q9Y2H9 1570 aa20.54■□□□□ 0.88
CHAF1A-202ENST00000585371 ABCC5O15440 1437 aa20.53■□□□□ 0.88
CHAF1A-202ENST00000585371 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
CHAF1A-202ENST00000585371 RSPH4AQ5TD94 716 aa20.52■□□□□ 0.88
CHAF1A-202ENST00000585371 FBXO41Q8TF61 875 aa20.52■□□□□ 0.88
CHAF1A-202ENST00000585371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHAF1A-202ENST00000585371 MLECQ14165 292 aa20.51■□□□□ 0.87
CHAF1A-202ENST00000585371 DAPK1P53355 1430 aa20.51■□□□□ 0.87
CHAF1A-202ENST00000585371 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
CHAF1A-202ENST00000585371 ADGBQ8N7X0 1667 aa20.49■□□□□ 0.87
CHAF1A-202ENST00000585371 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
CHAF1A-202ENST00000585371 SHANK2Q9UPX8 1470 aa20.48■□□□□ 0.87
CHAF1A-202ENST00000585371 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
CHAF1A-202ENST00000585371 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
CHAF1A-202ENST00000585371 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
CHAF1A-202ENST00000585371 PTPRKQ15262 1439 aa20.45■□□□□ 0.86
CHAF1A-202ENST00000585371 PLXNC1O60486 1568 aa20.44■□□□□ 0.86
CHAF1A-202ENST00000585371 PREX1Q8TCU6 1659 aa20.43■□□□□ 0.86
CHAF1A-202ENST00000585371 HSPA2P54652 639 aa20.43■□□□□ 0.86
CHAF1A-202ENST00000585371 MYT1LQ9UL68 1186 aa20.42■□□□□ 0.86
CHAF1A-202ENST00000585371 TSPY4P0CV99 314 aa20.41■□□□□ 0.86
CHAF1A-202ENST00000585371 TSPY10P0CW01 314 aa20.41■□□□□ 0.86
CHAF1A-202ENST00000585371 ADGRL2O95490 1459 aa20.41■□□□□ 0.86
CHAF1A-202ENST00000585371 AGLP35573 1532 aa20.38■□□□□ 0.85
CHAF1A-202ENST00000585371 A2MP01023 1474 aa20.38■□□□□ 0.85
CHAF1A-202ENST00000585371 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
CHAF1A-202ENST00000585371 NCOA1Q15788 1441 aa20.36■□□□□ 0.85
CHAF1A-202ENST00000585371 DHX29Q7Z478 1369 aaKnown RBP20.34■□□□□ 0.85
CHAF1A-202ENST00000585371 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
CHAF1A-202ENST00000585371 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.85
CHAF1A-202ENST00000585371 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
CHAF1A-202ENST00000585371 UHRF1BP1Q6BDS2 1440 aa20.32■□□□□ 0.84
CHAF1A-202ENST00000585371 C3P01024 1663 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms