RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 PDAP1Q13442 181 aaKnown RBP10.47□□□□□ -0.73
CDH8-213ENST00000584966 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
CDH8-213ENST00000584966 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
CDH8-213ENST00000584966 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
CDH8-213ENST00000584966 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
CDH8-213ENST00000584966 ATAD2BQ9ULI0 1458 aa10.42□□□□□ -0.74
CDH8-213ENST00000584966 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
CDH8-213ENST00000584966 WIZO95785 1651 aa10.41□□□□□ -0.74
CDH8-213ENST00000584966 NCAPD3P42695 1498 aa10.4□□□□□ -0.74
CDH8-213ENST00000584966 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
CDH8-213ENST00000584966 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
CDH8-213ENST00000584966 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
CDH8-213ENST00000584966 HMGXB3Q12766 1538 aa10.36□□□□□ -0.75
CDH8-213ENST00000584966 ZNF687Q8N1G0 1237 aa10.34□□□□□ -0.75
CDH8-213ENST00000584966 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
CDH8-213ENST00000584966 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
CDH8-213ENST00000584966 EFCAB3Q8N7B9 438 aa10.3□□□□□ -0.76
CDH8-213ENST00000584966 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
CDH8-213ENST00000584966 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
CDH8-213ENST00000584966 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
CDH8-213ENST00000584966 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
CDH8-213ENST00000584966 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
CDH8-213ENST00000584966 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CDH8-213ENST00000584966 PTGER2P43116 358 aa10.26□□□□□ -0.77
CDH8-213ENST00000584966 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
CDH8-213ENST00000584966 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
CDH8-213ENST00000584966 SPOCK2Q92563 424 aa10.25□□□□□ -0.77
CDH8-213ENST00000584966 ARSIQ5FYB1 569 aa10.21□□□□□ -0.77
CDH8-213ENST00000584966 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
CDH8-213ENST00000584966 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDH8-213ENST00000584966 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
CDH8-213ENST00000584966 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH8-213ENST00000584966 CCDC88BA6NC98 1476 aa10.15□□□□□ -0.78
CDH8-213ENST00000584966 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
CDH8-213ENST00000584966 MS4A4AQ96JQ5 239 aa10.14□□□□□ -0.79
CDH8-213ENST00000584966 NESP48681 1621 aa10.13□□□□□ -0.79
CDH8-213ENST00000584966 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
CDH8-213ENST00000584966 SOX12O15370 315 aa10.11□□□□□ -0.79
CDH8-213ENST00000584966 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
CDH8-213ENST00000584966 LAMC3Q9Y6N6 1575 aa10.1□□□□□ -0.79
CDH8-213ENST00000584966 PRDM2Q13029 1718 aa10.09□□□□□ -0.79
CDH8-213ENST00000584966 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
CDH8-213ENST00000584966 CADPSQ9ULU8 1353 aa10.08□□□□□ -0.8
CDH8-213ENST00000584966 TRIM41Q8WV44 630 aa10.07□□□□□ -0.8
CDH8-213ENST00000584966 KIF21AQ7Z4S6 1674 aa10.06□□□□□ -0.8
CDH8-213ENST00000584966 CFTRP13569 1480 aa10.06□□□□□ -0.8
CDH8-213ENST00000584966 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
CDH8-213ENST00000584966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
CDH8-213ENST00000584966 NUDT7P0C024 238 aa10.04□□□□□ -0.8
CDH8-213ENST00000584966 ZFP91Q96JP5 570 aaPredicted RBP10.04□□□□□ -0.8
CDH8-213ENST00000584966 PBX2P40425 430 aa10.03□□□□□ -0.8
CDH8-213ENST00000584966 POTEEQ6S8J3 1075 aa10.03□□□□□ -0.8
CDH8-213ENST00000584966 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
CDH8-213ENST00000584966 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
CDH8-213ENST00000584966 LHX6Q9UPM6 363 aa10□□□□□ -0.81
CDH8-213ENST00000584966 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
CDH8-213ENST00000584966 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
CDH8-213ENST00000584966 VGFO15240 615 aaPredicted RBP9.97□□□□□ -0.81
CDH8-213ENST00000584966 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
CDH8-213ENST00000584966 NLRP6P59044 892 aa9.96□□□□□ -0.82
CDH8-213ENST00000584966 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.82
CDH8-213ENST00000584966 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
CDH8-213ENST00000584966 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
CDH8-213ENST00000584966 ADGRD1Q6QNK2 874 aa9.94□□□□□ -0.82
CDH8-213ENST00000584966 PCDHGA4Q9Y5G9 962 aa9.94□□□□□ -0.82
CDH8-213ENST00000584966 KIF3CO14782 793 aa9.93□□□□□ -0.82
CDH8-213ENST00000584966 FBXO22Q8NEZ5 403 aa9.93□□□□□ -0.82
CDH8-213ENST00000584966 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
CDH8-213ENST00000584966 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
CDH8-213ENST00000584966 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.83
CDH8-213ENST00000584966 WDR62O43379 1518 aa9.89□□□□□ -0.83
CDH8-213ENST00000584966 URB2Q14146 1524 aaKnown RBP9.89□□□□□ -0.83
CDH8-213ENST00000584966 SLC34A2O95436 690 aa9.87□□□□□ -0.83
CDH8-213ENST00000584966 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
CDH8-213ENST00000584966 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
CDH8-213ENST00000584966 MFRPQ9BY79 579 aa9.86□□□□□ -0.83
CDH8-213ENST00000584966 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
CDH8-213ENST00000584966 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
CDH8-213ENST00000584966 CUX2O14529 1486 aa9.85□□□□□ -0.83
CDH8-213ENST00000584966 HRO43593 1189 aa9.84□□□□□ -0.83
CDH8-213ENST00000584966 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
CDH8-213ENST00000584966 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
CDH8-213ENST00000584966 PSEN2P49810 448 aa9.83□□□□□ -0.84
CDH8-213ENST00000584966 CUX1P39880 1505 aa9.82□□□□□ -0.84
CDH8-213ENST00000584966 TK2O00142 265 aa9.82□□□□□ -0.84
CDH8-213ENST00000584966 TMC2Q8TDI7 906 aa9.82□□□□□ -0.84
CDH8-213ENST00000584966 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
CDH8-213ENST00000584966 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
CDH8-213ENST00000584966 STAC3Q96MF2 364 aa9.8□□□□□ -0.84
CDH8-213ENST00000584966 BIVM-ERCC5R4GMW8 1640 aa9.79□□□□□ -0.84
CDH8-213ENST00000584966 SYNJ1O43426 1573 aa9.79□□□□□ -0.84
CDH8-213ENST00000584966 TOP2BQ02880 1626 aa9.78□□□□□ -0.84
CDH8-213ENST00000584966 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
CDH8-213ENST00000584966 PTPN5P54829 565 aa9.76□□□□□ -0.85
CDH8-213ENST00000584966 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
CDH8-213ENST00000584966 TAOK2Q9UL54 1235 aa9.76□□□□□ -0.85
CDH8-213ENST00000584966 POLA1P09884 1462 aaPredicted RBP9.76□□□□□ -0.85
CDH8-213ENST00000584966 WRNQ14191 1432 aaPredicted RBP eCLIP9.75□□□□□ -0.85
CDH8-213ENST00000584966 STK25O00506 426 aa9.75□□□□□ -0.85
CDH8-213ENST00000584966 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms