RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 RAPGEF3O95398 923 aa16.44■□□□□ 0.22
SNORD3A-201ENST00000584923 EHBP1L1Q8N3D4 1523 aa16.44■□□□□ 0.22
SNORD3A-201ENST00000584923 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
SNORD3A-201ENST00000584923 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
SNORD3A-201ENST00000584923 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
SNORD3A-201ENST00000584923 ARHGAP5Q13017 1502 aa16.4■□□□□ 0.22
SNORD3A-201ENST00000584923 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
SNORD3A-201ENST00000584923 APLP2Q06481 763 aa16.4■□□□□ 0.22
SNORD3A-201ENST00000584923 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
SNORD3A-201ENST00000584923 LRRC9Q6ZRR7 1453 aa16.4■□□□□ 0.22
SNORD3A-201ENST00000584923 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
SNORD3A-201ENST00000584923 CCNB3Q8WWL7 1395 aa16.38■□□□□ 0.21
SNORD3A-201ENST00000584923 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
SNORD3A-201ENST00000584923 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
SNORD3A-201ENST00000584923 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
SNORD3A-201ENST00000584923 SUPT6HQ7KZ85 1726 aaKnown RBP16.36■□□□□ 0.21
SNORD3A-201ENST00000584923 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
SNORD3A-201ENST00000584923 ARHGEF40Q8TER5 1519 aa16.35■□□□□ 0.21
SNORD3A-201ENST00000584923 ZMYM4Q5VZL5 1548 aa16.34■□□□□ 0.21
SNORD3A-201ENST00000584923 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.21
SNORD3A-201ENST00000584923 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
SNORD3A-201ENST00000584923 ITSN2Q9NZM3 1697 aa16.31■□□□□ 0.2
SNORD3A-201ENST00000584923 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
SNORD3A-201ENST00000584923 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
SNORD3A-201ENST00000584923 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
SNORD3A-201ENST00000584923 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
SNORD3A-201ENST00000584923 ABCC1P33527 1531 aa16.3■□□□□ 0.2
SNORD3A-201ENST00000584923 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
SNORD3A-201ENST00000584923 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
SNORD3A-201ENST00000584923 BCORL1Q5H9F3 1711 aa16.3■□□□□ 0.2
SNORD3A-201ENST00000584923 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
SNORD3A-201ENST00000584923 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
SNORD3A-201ENST00000584923 AFAP1Q8N556 730 aa16.29■□□□□ 0.2
SNORD3A-201ENST00000584923 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
SNORD3A-201ENST00000584923 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
SNORD3A-201ENST00000584923 KDM5CP41229 1560 aa16.27■□□□□ 0.2
SNORD3A-201ENST00000584923 TRAPPC8Q9Y2L5 1435 aa16.27■□□□□ 0.19
SNORD3A-201ENST00000584923 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNORD3A-201ENST00000584923 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
SNORD3A-201ENST00000584923 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
SNORD3A-201ENST00000584923 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
SNORD3A-201ENST00000584923 MIA2Q96PC5 1412 aa16.24■□□□□ 0.19
SNORD3A-201ENST00000584923 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
SNORD3A-201ENST00000584923 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
SNORD3A-201ENST00000584923 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
SNORD3A-201ENST00000584923 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
SNORD3A-201ENST00000584923 ATP10AO60312 1499 aa16.21■□□□□ 0.19
SNORD3A-201ENST00000584923 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.18
SNORD3A-201ENST00000584923 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.18
SNORD3A-201ENST00000584923 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
SNORD3A-201ENST00000584923 PTPRMP28827 1452 aa16.19■□□□□ 0.18
SNORD3A-201ENST00000584923 CAMSAP2Q08AD1 1489 aa16.19■□□□□ 0.18
SNORD3A-201ENST00000584923 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
SNORD3A-201ENST00000584923 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
SNORD3A-201ENST00000584923 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
SNORD3A-201ENST00000584923 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
SNORD3A-201ENST00000584923 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
SNORD3A-201ENST00000584923 SENP3Q9H4L4 574 aaPredicted RBP16.17■□□□□ 0.18
SNORD3A-201ENST00000584923 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
SNORD3A-201ENST00000584923 C9orf84Q5VXU9 1444 aa16.17■□□□□ 0.18
SNORD3A-201ENST00000584923 RTEL1-TNFRSF6BF6WH68 1400 aa16.15■□□□□ 0.18
SNORD3A-201ENST00000584923 ARHGEF5Q12774 1597 aa16.15■□□□□ 0.18
SNORD3A-201ENST00000584923 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
SNORD3A-201ENST00000584923 CCDC141Q6ZP82 1450 aa16.15■□□□□ 0.18
SNORD3A-201ENST00000584923 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
SNORD3A-201ENST00000584923 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
SNORD3A-201ENST00000584923 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
SNORD3A-201ENST00000584923 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
SNORD3A-201ENST00000584923 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
SNORD3A-201ENST00000584923 MLECQ14165 292 aa16.12■□□□□ 0.17
SNORD3A-201ENST00000584923 TCOF1Q13428 1488 aaKnown RBP16.11■□□□□ 0.17
SNORD3A-201ENST00000584923 PTPN23Q9H3S7 1636 aa16.11■□□□□ 0.17
SNORD3A-201ENST00000584923 AGLP35573 1532 aa16.1■□□□□ 0.17
SNORD3A-201ENST00000584923 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
SNORD3A-201ENST00000584923 A2MP01023 1474 aa16.06■□□□□ 0.16
SNORD3A-201ENST00000584923 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
SNORD3A-201ENST00000584923 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
SNORD3A-201ENST00000584923 ABCC5O15440 1437 aa16.05■□□□□ 0.16
SNORD3A-201ENST00000584923 DHX29Q7Z478 1369 aaKnown RBP16.05■□□□□ 0.16
SNORD3A-201ENST00000584923 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
SNORD3A-201ENST00000584923 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
SNORD3A-201ENST00000584923 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
SNORD3A-201ENST00000584923 DAPK1P53355 1430 aa16.02■□□□□ 0.16
SNORD3A-201ENST00000584923 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
SNORD3A-201ENST00000584923 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
SNORD3A-201ENST00000584923 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
SNORD3A-201ENST00000584923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNORD3A-201ENST00000584923 C3P01024 1663 aa16.01■□□□□ 0.15
SNORD3A-201ENST00000584923 PPP6R1Q9UPN7 881 aa16■□□□□ 0.15
SNORD3A-201ENST00000584923 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
SNORD3A-201ENST00000584923 CEBPAP49715 358 aaPredicted RBP15.98■□□□□ 0.15
SNORD3A-201ENST00000584923 SETD1BQ9UPS6 1966 aaKnown RBP15.97■□□□□ 0.15
SNORD3A-201ENST00000584923 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.15
SNORD3A-201ENST00000584923 KIF3BO15066 747 aa15.96■□□□□ 0.15
SNORD3A-201ENST00000584923 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
SNORD3A-201ENST00000584923 ANKRD30AQ9BXX3 1397 aa15.96■□□□□ 0.15
SNORD3A-201ENST00000584923 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
SNORD3A-201ENST00000584923 GGT6Q6P531 493 aa15.95■□□□□ 0.14
SNORD3A-201ENST00000584923 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
SNORD3A-201ENST00000584923 NCOA1Q15788 1441 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms