RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-205ENST00000584911 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
LINC00473-205ENST00000584911 NEFLP07196 543 aa16.88■□□□□ 0.29
LINC00473-205ENST00000584911 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
LINC00473-205ENST00000584911 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
LINC00473-205ENST00000584911 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
LINC00473-205ENST00000584911 ADGRL1O94910 1474 aa16.86■□□□□ 0.29
LINC00473-205ENST00000584911 FMN1Q68DA7 1419 aa16.84■□□□□ 0.29
LINC00473-205ENST00000584911 NEO1Q92859 1461 aa16.84■□□□□ 0.29
LINC00473-205ENST00000584911 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
LINC00473-205ENST00000584911 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
LINC00473-205ENST00000584911 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC00473-205ENST00000584911 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
LINC00473-205ENST00000584911 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
LINC00473-205ENST00000584911 ITGAEP38570 1179 aa16.8■□□□□ 0.28
LINC00473-205ENST00000584911 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
LINC00473-205ENST00000584911 PPP1R15AO75807 674 aaPredicted RBP16.79■□□□□ 0.28
LINC00473-205ENST00000584911 PRKCSHP14314 528 aaPredicted RBP16.78■□□□□ 0.28
LINC00473-205ENST00000584911 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.28
LINC00473-205ENST00000584911 FRMPD1Q5SYB0 1578 aa16.76■□□□□ 0.27
LINC00473-205ENST00000584911 RAPGEF3O95398 923 aa16.76■□□□□ 0.27
LINC00473-205ENST00000584911 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
LINC00473-205ENST00000584911 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
LINC00473-205ENST00000584911 CCNB3Q8WWL7 1395 aa16.75■□□□□ 0.27
LINC00473-205ENST00000584911 FANCAO15360 1455 aa16.74■□□□□ 0.27
LINC00473-205ENST00000584911 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
LINC00473-205ENST00000584911 AKNAQ7Z591 1439 aa16.74■□□□□ 0.27
LINC00473-205ENST00000584911 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
LINC00473-205ENST00000584911 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LINC00473-205ENST00000584911 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
LINC00473-205ENST00000584911 RICTORQ6R327 1708 aa16.71■□□□□ 0.27
LINC00473-205ENST00000584911 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
LINC00473-205ENST00000584911 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
LINC00473-205ENST00000584911 PLCH2O75038 1416 aa16.7■□□□□ 0.26
LINC00473-205ENST00000584911 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
LINC00473-205ENST00000584911 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
LINC00473-205ENST00000584911 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
LINC00473-205ENST00000584911 TROQ12816 1431 aaPredicted RBP16.68■□□□□ 0.26
LINC00473-205ENST00000584911 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
LINC00473-205ENST00000584911 KIF14Q15058 1648 aa16.68■□□□□ 0.26
LINC00473-205ENST00000584911 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
LINC00473-205ENST00000584911 MYO5CQ9NQX4 1742 aa16.66■□□□□ 0.26
LINC00473-205ENST00000584911 ZMYM4Q5VZL5 1548 aa16.66■□□□□ 0.26
LINC00473-205ENST00000584911 ARHGEF40Q8TER5 1519 aa16.65■□□□□ 0.26
LINC00473-205ENST00000584911 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
LINC00473-205ENST00000584911 ANP32CO43423 234 aa16.64■□□□□ 0.25
LINC00473-205ENST00000584911 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
LINC00473-205ENST00000584911 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
LINC00473-205ENST00000584911 FYCO1Q9BQS8 1478 aa16.63■□□□□ 0.25
LINC00473-205ENST00000584911 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
LINC00473-205ENST00000584911 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
LINC00473-205ENST00000584911 DEKP35659 375 aaKnown RBP16.61■□□□□ 0.25
LINC00473-205ENST00000584911 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
LINC00473-205ENST00000584911 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
LINC00473-205ENST00000584911 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
LINC00473-205ENST00000584911 BCORL1Q5H9F3 1711 aa16.61■□□□□ 0.25
LINC00473-205ENST00000584911 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
LINC00473-205ENST00000584911 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
LINC00473-205ENST00000584911 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.24
LINC00473-205ENST00000584911 HECW2Q9P2P5 1572 aa16.58■□□□□ 0.24
LINC00473-205ENST00000584911 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
LINC00473-205ENST00000584911 ARHGAP5Q13017 1502 aa16.57■□□□□ 0.24
LINC00473-205ENST00000584911 CDC42BPBQ9Y5S2 1711 aa16.57■□□□□ 0.24
LINC00473-205ENST00000584911 PTPRMP28827 1452 aa16.56■□□□□ 0.24
LINC00473-205ENST00000584911 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
LINC00473-205ENST00000584911 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
LINC00473-205ENST00000584911 PREX2Q70Z35 1606 aa16.55■□□□□ 0.24
LINC00473-205ENST00000584911 MADDQ8WXG6 1647 aa16.55■□□□□ 0.24
LINC00473-205ENST00000584911 MAP3K1Q13233 1512 aa16.54■□□□□ 0.24
LINC00473-205ENST00000584911 ZNF518AQ6AHZ1 1483 aa16.53■□□□□ 0.24
LINC00473-205ENST00000584911 KDM5CP41229 1560 aa16.53■□□□□ 0.24
LINC00473-205ENST00000584911 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
LINC00473-205ENST00000584911 ATP10AO60312 1499 aa16.51■□□□□ 0.23
LINC00473-205ENST00000584911 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
LINC00473-205ENST00000584911 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
LINC00473-205ENST00000584911 ABCC1P33527 1531 aa16.5■□□□□ 0.23
LINC00473-205ENST00000584911 HIRIP3Q9BW71 556 aaPredicted RBP16.49■□□□□ 0.23
LINC00473-205ENST00000584911 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
LINC00473-205ENST00000584911 ARHGEF12Q9NZN5 1544 aa16.49■□□□□ 0.23
LINC00473-205ENST00000584911 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
LINC00473-205ENST00000584911 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
LINC00473-205ENST00000584911 RIMS1Q86UR5 1692 aaKnown RBP16.48■□□□□ 0.23
LINC00473-205ENST00000584911 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
LINC00473-205ENST00000584911 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
LINC00473-205ENST00000584911 MLH3Q9UHC1 1453 aa16.46■□□□□ 0.23
LINC00473-205ENST00000584911 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
LINC00473-205ENST00000584911 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC00473-205ENST00000584911 DIP2CQ9Y2E4 1556 aa16.44■□□□□ 0.22
LINC00473-205ENST00000584911 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
LINC00473-205ENST00000584911 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
LINC00473-205ENST00000584911 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
LINC00473-205ENST00000584911 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
LINC00473-205ENST00000584911 FER1L4A9Z1Z3 1794 aa16.42■□□□□ 0.22
LINC00473-205ENST00000584911 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
LINC00473-205ENST00000584911 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
LINC00473-205ENST00000584911 MLECQ14165 292 aa16.41■□□□□ 0.22
LINC00473-205ENST00000584911 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
LINC00473-205ENST00000584911 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
LINC00473-205ENST00000584911 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.22
LINC00473-205ENST00000584911 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.22
LINC00473-205ENST00000584911 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms