RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 MRS2Q9HD23 443 aa25.01■■□□□ 1.59
CUEDC1-212ENST00000584746 CFDP1Q9UEE9 299 aaPredicted RBP25.01■■□□□ 1.59
CUEDC1-212ENST00000584746 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
CUEDC1-212ENST00000584746 KDM2AQ9Y2K7 1162 aa24.99■■□□□ 1.59
CUEDC1-212ENST00000584746 RBM19Q9Y4C8 960 aaKnown RBP24.97■■□□□ 1.59
CUEDC1-212ENST00000584746 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
CUEDC1-212ENST00000584746 ARHGEF11O15085 1522 aa24.93■■□□□ 1.58
CUEDC1-212ENST00000584746 ABCC5O15440 1437 aa24.92■■□□□ 1.58
CUEDC1-212ENST00000584746 DAPK1P53355 1430 aa24.92■■□□□ 1.58
CUEDC1-212ENST00000584746 PLB1Q6P1J6 1458 aa24.92■■□□□ 1.58
CUEDC1-212ENST00000584746 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
CUEDC1-212ENST00000584746 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
CUEDC1-212ENST00000584746 WDR62O43379 1518 aa24.91■■□□□ 1.58
CUEDC1-212ENST00000584746 PKD2Q13563 968 aa24.9■■□□□ 1.58
CUEDC1-212ENST00000584746 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
CUEDC1-212ENST00000584746 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
CUEDC1-212ENST00000584746 NUP153P49790 1475 aaKnown RBP24.88■■□□□ 1.57
CUEDC1-212ENST00000584746 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
CUEDC1-212ENST00000584746 DISP1Q96F81 1524 aa24.86■■□□□ 1.57
CUEDC1-212ENST00000584746 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
CUEDC1-212ENST00000584746 CCDC7Q96M83 1385 aa24.86■■□□□ 1.57
CUEDC1-212ENST00000584746 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
CUEDC1-212ENST00000584746 B4GALNT3Q6L9W6 998 aa24.86■■□□□ 1.57
CUEDC1-212ENST00000584746 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
CUEDC1-212ENST00000584746 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
CUEDC1-212ENST00000584746 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
CUEDC1-212ENST00000584746 JPH4Q96JJ6 628 aa24.8■■□□□ 1.56
CUEDC1-212ENST00000584746 CNTLNQ9NXG0 1405 aa24.8■■□□□ 1.56
CUEDC1-212ENST00000584746 MIA2Q96PC5 1412 aa24.8■■□□□ 1.56
CUEDC1-212ENST00000584746 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
CUEDC1-212ENST00000584746 RGL3Q3MIN7 710 aa24.76■■□□□ 1.55
CUEDC1-212ENST00000584746 ANP32EQ9BTT0 268 aa24.76■■□□□ 1.55
CUEDC1-212ENST00000584746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.55
CUEDC1-212ENST00000584746 KIAA0556O60303 1618 aa24.75■■□□□ 1.55
CUEDC1-212ENST00000584746 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
CUEDC1-212ENST00000584746 KIAA0586Q9BVV6 1533 aa24.74■■□□□ 1.55
CUEDC1-212ENST00000584746 RPRD2Q5VT52 1461 aaKnown RBP24.73■■□□□ 1.55
CUEDC1-212ENST00000584746 KIF14Q15058 1648 aa24.72■■□□□ 1.55
CUEDC1-212ENST00000584746 NCOA1Q15788 1441 aa24.72■■□□□ 1.55
CUEDC1-212ENST00000584746 CAMSAP2Q08AD1 1489 aa24.71■■□□□ 1.55
CUEDC1-212ENST00000584746 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
CUEDC1-212ENST00000584746 DCAF11Q8TEB1 546 aa24.71■■□□□ 1.55
CUEDC1-212ENST00000584746 NUP155O75694 1391 aa24.7■■□□□ 1.54
CUEDC1-212ENST00000584746 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
CUEDC1-212ENST00000584746 TEX14Q8IWB6 1497 aa24.69■■□□□ 1.54
CUEDC1-212ENST00000584746 MSH5O43196 834 aa24.69■■□□□ 1.54
CUEDC1-212ENST00000584746 CARD11Q9BXL7 1154 aa24.68■■□□□ 1.54
CUEDC1-212ENST00000584746 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
CUEDC1-212ENST00000584746 RAPGEF6Q8TEU7 1601 aa24.68■■□□□ 1.54
CUEDC1-212ENST00000584746 USP47Q96K76 1375 aa24.67■■□□□ 1.54
CUEDC1-212ENST00000584746 PZPP20742 1482 aa24.66■■□□□ 1.54
CUEDC1-212ENST00000584746 AKNAQ7Z591 1439 aa24.66■■□□□ 1.54
CUEDC1-212ENST00000584746 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
CUEDC1-212ENST00000584746 ST20-MTHFSA0A0A6YYL1 179 aa24.65■■□□□ 1.54
CUEDC1-212ENST00000584746 TROQ12816 1431 aaPredicted RBP24.64■■□□□ 1.54
CUEDC1-212ENST00000584746 DNMT1P26358 1616 aaKnown RBP24.64■■□□□ 1.53
CUEDC1-212ENST00000584746 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
CUEDC1-212ENST00000584746 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
CUEDC1-212ENST00000584746 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
CUEDC1-212ENST00000584746 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
CUEDC1-212ENST00000584746 ANKRD50Q9ULJ7 1429 aa24.59■■□□□ 1.53
CUEDC1-212ENST00000584746 SPATA31E1Q6ZUB1 1445 aa24.58■■□□□ 1.53
CUEDC1-212ENST00000584746 ANKRD30AQ9BXX3 1397 aa24.56■■□□□ 1.52
CUEDC1-212ENST00000584746 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
CUEDC1-212ENST00000584746 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
CUEDC1-212ENST00000584746 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
CUEDC1-212ENST00000584746 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
CUEDC1-212ENST00000584746 PPP4R2Q9NY27 417 aa24.52■■□□□ 1.52
CUEDC1-212ENST00000584746 BCORL1Q5H9F3 1711 aa24.52■■□□□ 1.52
CUEDC1-212ENST00000584746 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
CUEDC1-212ENST00000584746 CARMIL2Q6F5E8 1435 aa24.49■■□□□ 1.51
CUEDC1-212ENST00000584746 C9orf84Q5VXU9 1444 aa24.48■■□□□ 1.51
CUEDC1-212ENST00000584746 KIF15Q9NS87 1388 aa24.47■■□□□ 1.51
CUEDC1-212ENST00000584746 CC2D1BQ5T0F9 858 aaKnown RBP24.47■■□□□ 1.51
CUEDC1-212ENST00000584746 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
CUEDC1-212ENST00000584746 ATP10BO94823 1461 aa24.46■■□□□ 1.51
CUEDC1-212ENST00000584746 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
CUEDC1-212ENST00000584746 ROCK2O75116 1388 aaKnown RBP24.41■■□□□ 1.5
CUEDC1-212ENST00000584746 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
CUEDC1-212ENST00000584746 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.5
CUEDC1-212ENST00000584746 CCDC136Q96JN2 1154 aa24.38■■□□□ 1.49
CUEDC1-212ENST00000584746 PTPRGP23470 1445 aa24.36■■□□□ 1.49
CUEDC1-212ENST00000584746 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
CUEDC1-212ENST00000584746 SKAP1Q86WV1 359 aa24.34■■□□□ 1.49
CUEDC1-212ENST00000584746 CDCA7LQ96GN5 454 aa24.33■■□□□ 1.49
CUEDC1-212ENST00000584746 CDC42BPAQ5VT25 1732 aa24.33■■□□□ 1.49
CUEDC1-212ENST00000584746 MBD5Q9P267 1494 aa24.33■■□□□ 1.48
CUEDC1-212ENST00000584746 ITSN2Q9NZM3 1697 aa24.31■■□□□ 1.48
CUEDC1-212ENST00000584746 PLIN1O60240 522 aa24.3■■□□□ 1.48
CUEDC1-212ENST00000584746 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
CUEDC1-212ENST00000584746 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
CUEDC1-212ENST00000584746 NBR1Q14596 966 aa24.28■■□□□ 1.48
CUEDC1-212ENST00000584746 KDM5CP41229 1560 aa24.28■■□□□ 1.48
CUEDC1-212ENST00000584746 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
CUEDC1-212ENST00000584746 ABCC10Q5T3U5 1492 aa24.28■■□□□ 1.48
CUEDC1-212ENST00000584746 NUP160Q12769 1436 aa24.28■■□□□ 1.48
CUEDC1-212ENST00000584746 NPM2Q86SE8 214 aaKnown RBP24.26■■□□□ 1.47
CUEDC1-212ENST00000584746 ADGRL2O95490 1459 aa24.26■■□□□ 1.47
CUEDC1-212ENST00000584746 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
CUEDC1-212ENST00000584746 CCDC144AA2RUR9 1427 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms