RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TIAM1Q13009 1591 aa25.18■■□□□ 1.62
CSNK1D-223ENST00000584472 EHBP1L1Q8N3D4 1523 aa25.18■■□□□ 1.62
CSNK1D-223ENST00000584472 MAGI2Q86UL8 1455 aa25.18■■□□□ 1.62
CSNK1D-223ENST00000584472 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
CSNK1D-223ENST00000584472 MAP3K1Q13233 1512 aa25.17■■□□□ 1.62
CSNK1D-223ENST00000584472 PREX2Q70Z35 1606 aa25.15■■□□□ 1.62
CSNK1D-223ENST00000584472 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
CSNK1D-223ENST00000584472 ARHGAP5Q13017 1502 aa25.12■■□□□ 1.61
CSNK1D-223ENST00000584472 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
CSNK1D-223ENST00000584472 ADAMTSL3P82987 1691 aa25.11■■□□□ 1.61
CSNK1D-223ENST00000584472 CDC42BPAQ5VT25 1732 aa25.11■■□□□ 1.61
CSNK1D-223ENST00000584472 CDC42BPBQ9Y5S2 1711 aa25.11■■□□□ 1.61
CSNK1D-223ENST00000584472 SCAPERQ9BY12 1400 aa25.08■■□□□ 1.61
CSNK1D-223ENST00000584472 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
CSNK1D-223ENST00000584472 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
CSNK1D-223ENST00000584472 LRRC9Q6ZRR7 1453 aa25.06■■□□□ 1.6
CSNK1D-223ENST00000584472 GPATCH8Q9UKJ3 1502 aaKnown RBP25.06■■□□□ 1.6
CSNK1D-223ENST00000584472 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
CSNK1D-223ENST00000584472 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
CSNK1D-223ENST00000584472 ZNF518AQ6AHZ1 1483 aa25.03■■□□□ 1.6
CSNK1D-223ENST00000584472 ITSN2Q9NZM3 1697 aa25.01■■□□□ 1.59
CSNK1D-223ENST00000584472 KDM5CP41229 1560 aa25.01■■□□□ 1.59
CSNK1D-223ENST00000584472 PTPRMP28827 1452 aa25■■□□□ 1.59
CSNK1D-223ENST00000584472 NCOA2Q15596 1464 aa25■■□□□ 1.59
CSNK1D-223ENST00000584472 APLP2Q06481 763 aa24.99■■□□□ 1.59
CSNK1D-223ENST00000584472 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
CSNK1D-223ENST00000584472 ABCC1P33527 1531 aa24.98■■□□□ 1.59
CSNK1D-223ENST00000584472 HECW2Q9P2P5 1572 aa24.97■■□□□ 1.59
CSNK1D-223ENST00000584472 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
CSNK1D-223ENST00000584472 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
CSNK1D-223ENST00000584472 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
CSNK1D-223ENST00000584472 CFDP1Q9UEE9 299 aaPredicted RBP24.94■■□□□ 1.58
CSNK1D-223ENST00000584472 ATP10AO60312 1499 aa24.94■■□□□ 1.58
CSNK1D-223ENST00000584472 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
CSNK1D-223ENST00000584472 PLEKHH2Q8IVE3 1493 aa24.93■■□□□ 1.58
CSNK1D-223ENST00000584472 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
CSNK1D-223ENST00000584472 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
CSNK1D-223ENST00000584472 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
CSNK1D-223ENST00000584472 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
CSNK1D-223ENST00000584472 ARHGEF12Q9NZN5 1544 aa24.9■■□□□ 1.58
CSNK1D-223ENST00000584472 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.57
CSNK1D-223ENST00000584472 SYCP2Q9BX26 1530 aa24.87■■□□□ 1.57
CSNK1D-223ENST00000584472 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
CSNK1D-223ENST00000584472 AFAP1Q8N556 730 aa24.85■■□□□ 1.57
CSNK1D-223ENST00000584472 TRAPPC8Q9Y2L5 1435 aa24.85■■□□□ 1.57
CSNK1D-223ENST00000584472 RIMS1Q86UR5 1692 aaKnown RBP24.82■■□□□ 1.56
CSNK1D-223ENST00000584472 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
CSNK1D-223ENST00000584472 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
CSNK1D-223ENST00000584472 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
CSNK1D-223ENST00000584472 AGLP35573 1532 aa24.8■■□□□ 1.56
CSNK1D-223ENST00000584472 MIA2Q96PC5 1412 aa24.79■■□□□ 1.56
CSNK1D-223ENST00000584472 FER1L4A9Z1Z3 1794 aa24.78■■□□□ 1.56
CSNK1D-223ENST00000584472 ZNF644Q9H582 1327 aaPredicted RBP24.78■■□□□ 1.56
CSNK1D-223ENST00000584472 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
CSNK1D-223ENST00000584472 ABCA6Q8N139 1617 aa24.77■■□□□ 1.56
CSNK1D-223ENST00000584472 HNRNPMP52272 730 aaKnown RBP eCLIP24.77■■□□□ 1.562e-7■■■■■ 32.8
CSNK1D-223ENST00000584472 KIDINS220Q9ULH0 1771 aa24.75■■□□□ 1.55
CSNK1D-223ENST00000584472 LMTK3Q96Q04 1460 aa24.74■■□□□ 1.55
CSNK1D-223ENST00000584472 INO80Q9ULG1 1556 aaPredicted RBP24.73■■□□□ 1.55
CSNK1D-223ENST00000584472 ARHGEF5Q12774 1597 aa24.72■■□□□ 1.55
CSNK1D-223ENST00000584472 PPARGC1BQ86YN6 1023 aaKnown RBP24.72■■□□□ 1.55
CSNK1D-223ENST00000584472 SPAG9O60271 1321 aaKnown RBP24.71■■□□□ 1.55
CSNK1D-223ENST00000584472 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
CSNK1D-223ENST00000584472 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.55
CSNK1D-223ENST00000584472 RSPH4AQ5TD94 716 aa24.69■■□□□ 1.54
CSNK1D-223ENST00000584472 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
CSNK1D-223ENST00000584472 FGD6Q6ZV73 1430 aa24.68■■□□□ 1.54
CSNK1D-223ENST00000584472 PTPN23Q9H3S7 1636 aa24.66■■□□□ 1.54
CSNK1D-223ENST00000584472 MLECQ14165 292 aa24.66■■□□□ 1.54
CSNK1D-223ENST00000584472 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
CSNK1D-223ENST00000584472 TCOF1Q13428 1488 aaKnown RBP24.64■■□□□ 1.53
CSNK1D-223ENST00000584472 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
CSNK1D-223ENST00000584472 PLXNC1O60486 1568 aa24.62■■□□□ 1.53
CSNK1D-223ENST00000584472 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
CSNK1D-223ENST00000584472 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
CSNK1D-223ENST00000584472 MAST1Q9Y2H9 1570 aa24.59■■□□□ 1.53
CSNK1D-223ENST00000584472 SETD1BQ9UPS6 1966 aaKnown RBP24.57■■□□□ 1.52
CSNK1D-223ENST00000584472 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
CSNK1D-223ENST00000584472 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
CSNK1D-223ENST00000584472 A2MP01023 1474 aa24.56■■□□□ 1.52
CSNK1D-223ENST00000584472 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
CSNK1D-223ENST00000584472 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
CSNK1D-223ENST00000584472 MROH2AA6NES4 1674 aa24.54■■□□□ 1.52
CSNK1D-223ENST00000584472 SHANK2Q9UPX8 1470 aa24.54■■□□□ 1.52
CSNK1D-223ENST00000584472 ESF1Q9H501 851 aaKnown RBP24.52■■□□□ 1.52
CSNK1D-223ENST00000584472 C3P01024 1663 aa24.52■■□□□ 1.52
CSNK1D-223ENST00000584472 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
CSNK1D-223ENST00000584472 ABCC5O15440 1437 aa24.51■■□□□ 1.51
CSNK1D-223ENST00000584472 DAPK1P53355 1430 aa24.5■■□□□ 1.51
CSNK1D-223ENST00000584472 UHRF1BP1Q6BDS2 1440 aa24.49■■□□□ 1.51
CSNK1D-223ENST00000584472 NPATQ14207 1427 aa24.48■■□□□ 1.51
CSNK1D-223ENST00000584472 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-223ENST00000584472 CEBPAP49715 358 aaPredicted RBP24.47■■□□□ 1.51
CSNK1D-223ENST00000584472 FAM135AQ9P2D6 1515 aa24.45■■□□□ 1.5
CSNK1D-223ENST00000584472 HSPA2P54652 639 aa24.44■■□□□ 1.5
CSNK1D-223ENST00000584472 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
CSNK1D-223ENST00000584472 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
CSNK1D-223ENST00000584472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.53e-11■■■■■ 27.3
CSNK1D-223ENST00000584472 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
CSNK1D-223ENST00000584472 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms