RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
SNX11-213ENST00000584335 HRCP23327 699 aa14.25□□□□□ -0.13
SNX11-213ENST00000584335 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
SNX11-213ENST00000584335 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
SNX11-213ENST00000584335 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
SNX11-213ENST00000584335 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
SNX11-213ENST00000584335 UACAQ9BZF9 1416 aa14.24□□□□□ -0.13
SNX11-213ENST00000584335 ABCC2Q92887 1545 aa14.22□□□□□ -0.13
SNX11-213ENST00000584335 POLA2Q14181 598 aa14.22□□□□□ -0.13
SNX11-213ENST00000584335 ATP10BO94823 1461 aa14.22□□□□□ -0.13
SNX11-213ENST00000584335 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
SNX11-213ENST00000584335 UHRF1BP1LA0JNW5 1464 aa14.21□□□□□ -0.13
SNX11-213ENST00000584335 OSCARQ8IYS5 282 aa14.2□□□□□ -0.14
SNX11-213ENST00000584335 MIA2Q96PC5 1412 aa14.19□□□□□ -0.14
SNX11-213ENST00000584335 TCOF1Q13428 1488 aaKnown RBP14.18□□□□□ -0.14
SNX11-213ENST00000584335 PTPN23Q9H3S7 1636 aa14.17□□□□□ -0.14
SNX11-213ENST00000584335 ITSN2Q9NZM3 1697 aa14.15□□□□□ -0.14
SNX11-213ENST00000584335 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
SNX11-213ENST00000584335 KIF14Q15058 1648 aa14.15□□□□□ -0.14
SNX11-213ENST00000584335 KDM5BQ9UGL1 1544 aa14.14□□□□□ -0.15
SNX11-213ENST00000584335 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
SNX11-213ENST00000584335 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
SNX11-213ENST00000584335 ABCC10Q5T3U5 1492 aa14.12□□□□□ -0.15
SNX11-213ENST00000584335 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
SNX11-213ENST00000584335 ZCCHC11Q5TAX3 1644 aaKnown RBP14.11□□□□□ -0.15
SNX11-213ENST00000584335 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
SNX11-213ENST00000584335 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
SNX11-213ENST00000584335 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
SNX11-213ENST00000584335 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
SNX11-213ENST00000584335 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
SNX11-213ENST00000584335 AKNAQ7Z591 1439 aa14.05□□□□□ -0.16
SNX11-213ENST00000584335 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
SNX11-213ENST00000584335 ITGAEP38570 1179 aa14.03□□□□□ -0.16
SNX11-213ENST00000584335 HFM1A2PYH4 1435 aa14.03□□□□□ -0.16
SNX11-213ENST00000584335 PTPRKQ15262 1439 aa14.03□□□□□ -0.16
SNX11-213ENST00000584335 CAMSAP2Q08AD1 1489 aa14.02□□□□□ -0.16
SNX11-213ENST00000584335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNX11-213ENST00000584335 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
SNX11-213ENST00000584335 CLSPNQ9HAW4 1339 aa14.01□□□□□ -0.17
SNX11-213ENST00000584335 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
SNX11-213ENST00000584335 DAPK1P53355 1430 aa14□□□□□ -0.17
SNX11-213ENST00000584335 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
SNX11-213ENST00000584335 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
SNX11-213ENST00000584335 TTC37Q6PGP7 1564 aa14□□□□□ -0.17
SNX11-213ENST00000584335 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
SNX11-213ENST00000584335 CROCC2H7BZ55 1655 aa13.99□□□□□ -0.17
SNX11-213ENST00000584335 ROCK1Q13464 1354 aa13.98□□□□□ -0.17
SNX11-213ENST00000584335 DHX57Q6P158 1386 aaKnown RBP13.98□□□□□ -0.17
SNX11-213ENST00000584335 WDR7Q9Y4E6 1490 aa13.98□□□□□ -0.17
SNX11-213ENST00000584335 ABCC5O15440 1437 aa13.98□□□□□ -0.17
SNX11-213ENST00000584335 NAIPQ13075 1403 aa13.98□□□□□ -0.17
SNX11-213ENST00000584335 ARHGEF5Q12774 1597 aa13.97□□□□□ -0.17
SNX11-213ENST00000584335 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
SNX11-213ENST00000584335 ADGBQ8N7X0 1667 aa13.96□□□□□ -0.17
SNX11-213ENST00000584335 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
SNX11-213ENST00000584335 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
SNX11-213ENST00000584335 SAMD9LQ8IVG5 1584 aa13.95□□□□□ -0.18
SNX11-213ENST00000584335 ADGRL2O95490 1459 aa13.94□□□□□ -0.18
SNX11-213ENST00000584335 ABCA9Q8IUA7 1624 aa13.94□□□□□ -0.18
SNX11-213ENST00000584335 PLCH2O75038 1416 aa13.94□□□□□ -0.18
SNX11-213ENST00000584335 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
SNX11-213ENST00000584335 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
SNX11-213ENST00000584335 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
SNX11-213ENST00000584335 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
SNX11-213ENST00000584335 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
SNX11-213ENST00000584335 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
SNX11-213ENST00000584335 ASXL2Q76L83 1435 aa13.92□□□□□ -0.18
SNX11-213ENST00000584335 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
SNX11-213ENST00000584335 MBD5Q9P267 1494 aa13.91□□□□□ -0.18
SNX11-213ENST00000584335 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.18
SNX11-213ENST00000584335 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
SNX11-213ENST00000584335 MAST1Q9Y2H9 1570 aa13.89□□□□□ -0.19
SNX11-213ENST00000584335 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNX11-213ENST00000584335 CCDC141Q6ZP82 1450 aa13.88□□□□□ -0.19
SNX11-213ENST00000584335 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
SNX11-213ENST00000584335 ZNF777Q9ULD5 760 aaPredicted RBP13.88□□□□□ -0.19
SNX11-213ENST00000584335 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
SNX11-213ENST00000584335 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
SNX11-213ENST00000584335 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
SNX11-213ENST00000584335 ABCC1P33527 1531 aa13.86□□□□□ -0.19
SNX11-213ENST00000584335 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
SNX11-213ENST00000584335 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
SNX11-213ENST00000584335 KDM6BO15054 1643 aa13.86□□□□□ -0.19
SNX11-213ENST00000584335 ANKRD30AQ9BXX3 1397 aa13.85□□□□□ -0.19
SNX11-213ENST00000584335 EFCAB2Q5VUJ9 269 aa13.85□□□□□ -0.19
SNX11-213ENST00000584335 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
SNX11-213ENST00000584335 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
SNX11-213ENST00000584335 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
SNX11-213ENST00000584335 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
SNX11-213ENST00000584335 ARHGEF12Q9NZN5 1544 aa13.81□□□□□ -0.2
SNX11-213ENST00000584335 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
SNX11-213ENST00000584335 HNRNPMP52272 730 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNX11-213ENST00000584335 FANCAO15360 1455 aa13.8□□□□□ -0.2
SNX11-213ENST00000584335 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
SNX11-213ENST00000584335 GLI2P10070 1586 aa13.79□□□□□ -0.2
SNX11-213ENST00000584335 RTEL1-TNFRSF6BF6WH68 1400 aa13.77□□□□□ -0.21
SNX11-213ENST00000584335 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
SNX11-213ENST00000584335 ANKRD50Q9ULJ7 1429 aa13.77□□□□□ -0.21
SNX11-213ENST00000584335 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
SNX11-213ENST00000584335 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms