RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 ABCA8O94911 1581 aa16.51■□□□□ 0.23
CDK5RAP3-232ENST00000584168 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
CDK5RAP3-232ENST00000584168 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-232ENST00000584168 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
CDK5RAP3-232ENST00000584168 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
CDK5RAP3-232ENST00000584168 CFAP43Q8NDM7 1665 aa16.48■□□□□ 0.23
CDK5RAP3-232ENST00000584168 TIMELESSQ9UNS1 1208 aa16.47■□□□□ 0.23
CDK5RAP3-232ENST00000584168 MAGI3Q5TCQ9 1506 aa16.47■□□□□ 0.23
CDK5RAP3-232ENST00000584168 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
CDK5RAP3-232ENST00000584168 EPRSP07814 1512 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-232ENST00000584168 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RTL5Q5HYW3 569 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-232ENST00000584168 ABCC2Q92887 1545 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RIMBP3CA6NJZ7 1639 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RIMBP3BA6NNM3 1639 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RIMBP3Q9UFD9 1639 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 AAMPQ13685 434 aa16.43■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
CDK5RAP3-232ENST00000584168 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
CDK5RAP3-232ENST00000584168 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-232ENST00000584168 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
CDK5RAP3-232ENST00000584168 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-232ENST00000584168 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-232ENST00000584168 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-232ENST00000584168 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 ATP10BO94823 1461 aa16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 C11orf95C9JLR9 678 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-232ENST00000584168 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
CDK5RAP3-232ENST00000584168 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
CDK5RAP3-232ENST00000584168 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
CDK5RAP3-232ENST00000584168 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-232ENST00000584168 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
CDK5RAP3-232ENST00000584168 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
CDK5RAP3-232ENST00000584168 RRBP1Q9P2E9 1410 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-232ENST00000584168 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-232ENST00000584168 CYB5RLQ6IPT4 315 aa16.3■□□□□ 0.2
CDK5RAP3-232ENST00000584168 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-232ENST00000584168 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-232ENST00000584168 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-232ENST00000584168 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-232ENST00000584168 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
CDK5RAP3-232ENST00000584168 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
CDK5RAP3-232ENST00000584168 MYOM3Q5VTT5 1437 aa16.26■□□□□ 0.19
CDK5RAP3-232ENST00000584168 KIF14Q15058 1648 aa16.25■□□□□ 0.19
CDK5RAP3-232ENST00000584168 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDK5RAP3-232ENST00000584168 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-232ENST00000584168 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
CDK5RAP3-232ENST00000584168 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-232ENST00000584168 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
CDK5RAP3-232ENST00000584168 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
CDK5RAP3-232ENST00000584168 BRPF3Q9ULD4 1205 aa16.21■□□□□ 0.18
CDK5RAP3-232ENST00000584168 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
CDK5RAP3-232ENST00000584168 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
CDK5RAP3-232ENST00000584168 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
CDK5RAP3-232ENST00000584168 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
CDK5RAP3-232ENST00000584168 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.184e-8■■□□□ 12.7
CDK5RAP3-232ENST00000584168 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
CDK5RAP3-232ENST00000584168 MAPKBP1O60336 1514 aa16.17■□□□□ 0.18
CDK5RAP3-232ENST00000584168 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
CDK5RAP3-232ENST00000584168 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
CDK5RAP3-232ENST00000584168 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-232ENST00000584168 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
CDK5RAP3-232ENST00000584168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.173e-9■■□□□ 12.3
CDK5RAP3-232ENST00000584168 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
CDK5RAP3-232ENST00000584168 TTC37Q6PGP7 1564 aa16.11■□□□□ 0.17
CDK5RAP3-232ENST00000584168 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
CDK5RAP3-232ENST00000584168 SETD5Q9C0A6 1442 aa16.09■□□□□ 0.17
CDK5RAP3-232ENST00000584168 ARXQ96QS3 562 aa16.09■□□□□ 0.17
CDK5RAP3-232ENST00000584168 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.17
CDK5RAP3-232ENST00000584168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDK5RAP3-232ENST00000584168 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.16
CDK5RAP3-232ENST00000584168 PREX2Q70Z35 1606 aa16.08■□□□□ 0.16
CDK5RAP3-232ENST00000584168 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-232ENST00000584168 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
CDK5RAP3-232ENST00000584168 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-232ENST00000584168 NEFMP07197 916 aa16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 CAMSAP2Q08AD1 1489 aa16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 USP35Q9P2H5 1018 aa16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 ABCC5O15440 1437 aa16.06■□□□□ 0.16
CDK5RAP3-232ENST00000584168 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
CDK5RAP3-232ENST00000584168 FOXD1Q16676 465 aa16.04■□□□□ 0.16
CDK5RAP3-232ENST00000584168 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
CDK5RAP3-232ENST00000584168 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
CDK5RAP3-232ENST00000584168 PLCH2O75038 1416 aa16.04■□□□□ 0.16
CDK5RAP3-232ENST00000584168 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
CDK5RAP3-232ENST00000584168 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-232ENST00000584168 GLI2P10070 1586 aa16.03■□□□□ 0.16
CDK5RAP3-232ENST00000584168 DAPK1P53355 1430 aa16.03■□□□□ 0.16
CDK5RAP3-232ENST00000584168 IPO9Q96P70 1041 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-232ENST00000584168 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.16
CDK5RAP3-232ENST00000584168 NAIPQ13075 1403 aa16.02■□□□□ 0.15
CDK5RAP3-232ENST00000584168 DIP2BQ9P265 1576 aa16.01■□□□□ 0.15
CDK5RAP3-232ENST00000584168 AFAP1Q8N556 730 aa16.01■□□□□ 0.15
CDK5RAP3-232ENST00000584168 KDM6BO15054 1643 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms