RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
RTTN-208ENST00000581709 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
RTTN-208ENST00000581709 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
RTTN-208ENST00000581709 ARAP3Q8WWN8 1544 aa13.76□□□□□ -0.21
RTTN-208ENST00000581709 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
RTTN-208ENST00000581709 COL17A1Q9UMD9 1497 aaPredicted RBP13.75□□□□□ -0.21
RTTN-208ENST00000581709 HNRNPMP52272 730 aaKnown RBP eCLIP13.75□□□□□ -0.21
RTTN-208ENST00000581709 ZNF644Q9H582 1327 aaPredicted RBP13.74□□□□□ -0.21
RTTN-208ENST00000581709 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
RTTN-208ENST00000581709 AFAP1Q8N556 730 aa13.74□□□□□ -0.21
RTTN-208ENST00000581709 MYT1LQ9UL68 1186 aa13.74□□□□□ -0.21
RTTN-208ENST00000581709 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
RTTN-208ENST00000581709 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
RTTN-208ENST00000581709 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
RTTN-208ENST00000581709 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
RTTN-208ENST00000581709 KDM6BO15054 1643 aa13.72□□□□□ -0.21
RTTN-208ENST00000581709 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
RTTN-208ENST00000581709 MYOM3Q5VTT5 1437 aa13.71□□□□□ -0.22
RTTN-208ENST00000581709 MIA2Q96PC5 1412 aa13.71□□□□□ -0.22
RTTN-208ENST00000581709 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.22
RTTN-208ENST00000581709 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
RTTN-208ENST00000581709 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
RTTN-208ENST00000581709 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
RTTN-208ENST00000581709 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
RTTN-208ENST00000581709 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
RTTN-208ENST00000581709 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
RTTN-208ENST00000581709 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
RTTN-208ENST00000581709 SPAG9O60271 1321 aaKnown RBP13.66□□□□□ -0.22
RTTN-208ENST00000581709 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
RTTN-208ENST00000581709 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
RTTN-208ENST00000581709 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
RTTN-208ENST00000581709 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
RTTN-208ENST00000581709 FGD6Q6ZV73 1430 aa13.64□□□□□ -0.23
RTTN-208ENST00000581709 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
RTTN-208ENST00000581709 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
RTTN-208ENST00000581709 MAGI2Q86UL8 1455 aa13.63□□□□□ -0.23
RTTN-208ENST00000581709 ITSN2Q9NZM3 1697 aa13.63□□□□□ -0.23
RTTN-208ENST00000581709 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
RTTN-208ENST00000581709 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
RTTN-208ENST00000581709 ABCC1P33527 1531 aa13.62□□□□□ -0.23
RTTN-208ENST00000581709 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
RTTN-208ENST00000581709 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
RTTN-208ENST00000581709 SYCP2Q9BX26 1530 aa13.6□□□□□ -0.23
RTTN-208ENST00000581709 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
RTTN-208ENST00000581709 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
RTTN-208ENST00000581709 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
RTTN-208ENST00000581709 ATP10AO60312 1499 aa13.57□□□□□ -0.24
RTTN-208ENST00000581709 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
RTTN-208ENST00000581709 ITGAEP38570 1179 aa13.57□□□□□ -0.24
RTTN-208ENST00000581709 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
RTTN-208ENST00000581709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
RTTN-208ENST00000581709 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
RTTN-208ENST00000581709 ZMYM4Q5VZL5 1548 aa13.55□□□□□ -0.24
RTTN-208ENST00000581709 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
RTTN-208ENST00000581709 FRMPD1Q5SYB0 1578 aa13.55□□□□□ -0.24
RTTN-208ENST00000581709 PTPN23Q9H3S7 1636 aa13.55□□□□□ -0.24
RTTN-208ENST00000581709 ABCC5O15440 1437 aa13.55□□□□□ -0.24
RTTN-208ENST00000581709 KDM5CP41229 1560 aa13.54□□□□□ -0.24
RTTN-208ENST00000581709 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
RTTN-208ENST00000581709 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
RTTN-208ENST00000581709 DAPK1P53355 1430 aa13.53□□□□□ -0.24
RTTN-208ENST00000581709 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
RTTN-208ENST00000581709 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
RTTN-208ENST00000581709 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.25
RTTN-208ENST00000581709 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
RTTN-208ENST00000581709 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
RTTN-208ENST00000581709 MLECQ14165 292 aa13.51□□□□□ -0.25
RTTN-208ENST00000581709 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
RTTN-208ENST00000581709 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
RTTN-208ENST00000581709 KIF3BO15066 747 aa13.49□□□□□ -0.25
RTTN-208ENST00000581709 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
RTTN-208ENST00000581709 GGT6Q6P531 493 aa13.48□□□□□ -0.25
RTTN-208ENST00000581709 ARHGEF40Q8TER5 1519 aa13.48□□□□□ -0.25
RTTN-208ENST00000581709 A2MP01023 1474 aa13.48□□□□□ -0.25
RTTN-208ENST00000581709 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
RTTN-208ENST00000581709 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
RTTN-208ENST00000581709 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
RTTN-208ENST00000581709 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
RTTN-208ENST00000581709 KIF15Q9NS87 1388 aa13.46□□□□□ -0.25
RTTN-208ENST00000581709 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
RTTN-208ENST00000581709 KIDINS220Q9ULH0 1771 aa13.45□□□□□ -0.26
RTTN-208ENST00000581709 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
RTTN-208ENST00000581709 ROCK1Q13464 1354 aa13.45□□□□□ -0.26
RTTN-208ENST00000581709 DNMT1P26358 1616 aaKnown RBP13.44□□□□□ -0.26
RTTN-208ENST00000581709 INO80Q9ULG1 1556 aaPredicted RBP13.44□□□□□ -0.26
RTTN-208ENST00000581709 MAST1Q9Y2H9 1570 aa13.44□□□□□ -0.26
RTTN-208ENST00000581709 AGLP35573 1532 aa13.42□□□□□ -0.26
RTTN-208ENST00000581709 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
RTTN-208ENST00000581709 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
RTTN-208ENST00000581709 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
RTTN-208ENST00000581709 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
RTTN-208ENST00000581709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
RTTN-208ENST00000581709 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
RTTN-208ENST00000581709 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
RTTN-208ENST00000581709 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
RTTN-208ENST00000581709 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
RTTN-208ENST00000581709 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
RTTN-208ENST00000581709 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
RTTN-208ENST00000581709 KANK1Q14678 1352 aa13.36□□□□□ -0.27
RTTN-208ENST00000581709 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms