RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.79
SNORD55-201ENST00000581525 EHBP1L1Q8N3D4 1523 aa20.02■□□□□ 0.79
SNORD55-201ENST00000581525 ADGRL1O94910 1474 aa20.01■□□□□ 0.79
SNORD55-201ENST00000581525 PREX2Q70Z35 1606 aa20■□□□□ 0.79
SNORD55-201ENST00000581525 RICTORQ6R327 1708 aa19.99■□□□□ 0.79
SNORD55-201ENST00000581525 ARHGAP5Q13017 1502 aa19.99■□□□□ 0.79
SNORD55-201ENST00000581525 ZMYM4Q5VZL5 1548 aa19.98■□□□□ 0.79
SNORD55-201ENST00000581525 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
SNORD55-201ENST00000581525 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
SNORD55-201ENST00000581525 MAGI2Q86UL8 1455 aa19.98■□□□□ 0.79
SNORD55-201ENST00000581525 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
SNORD55-201ENST00000581525 KDM4FA0A1W2PPD8 638 aa19.97■□□□□ 0.79
SNORD55-201ENST00000581525 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
SNORD55-201ENST00000581525 KANK4Q5T7N3 995 aaPredicted RBP19.95■□□□□ 0.78
SNORD55-201ENST00000581525 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
SNORD55-201ENST00000581525 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
SNORD55-201ENST00000581525 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
SNORD55-201ENST00000581525 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
SNORD55-201ENST00000581525 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
SNORD55-201ENST00000581525 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
SNORD55-201ENST00000581525 ABCC1P33527 1531 aa19.92■□□□□ 0.78
SNORD55-201ENST00000581525 KDM5CP41229 1560 aa19.91■□□□□ 0.78
SNORD55-201ENST00000581525 PLEKHH2Q8IVE3 1493 aa19.89■□□□□ 0.77
SNORD55-201ENST00000581525 MLH3Q9UHC1 1453 aa19.89■□□□□ 0.77
SNORD55-201ENST00000581525 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
SNORD55-201ENST00000581525 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
SNORD55-201ENST00000581525 SAMD9LQ8IVG5 1584 aa19.88■□□□□ 0.77
SNORD55-201ENST00000581525 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
SNORD55-201ENST00000581525 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
SNORD55-201ENST00000581525 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNORD55-201ENST00000581525 APLP2Q06481 763 aa19.85■□□□□ 0.77
SNORD55-201ENST00000581525 ZFYVE16Q7Z3T8 1539 aa19.85■□□□□ 0.77
SNORD55-201ENST00000581525 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
SNORD55-201ENST00000581525 ATP10AO60312 1499 aa19.84■□□□□ 0.77
SNORD55-201ENST00000581525 MBD5Q9P267 1494 aa19.84■□□□□ 0.77
SNORD55-201ENST00000581525 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.77
SNORD55-201ENST00000581525 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.76
SNORD55-201ENST00000581525 RSPH4AQ5TD94 716 aa19.81■□□□□ 0.76
SNORD55-201ENST00000581525 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
SNORD55-201ENST00000581525 MIA2Q96PC5 1412 aa19.81■□□□□ 0.76
SNORD55-201ENST00000581525 SYCP2Q9BX26 1530 aa19.8■□□□□ 0.76
SNORD55-201ENST00000581525 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
SNORD55-201ENST00000581525 REREQ9P2R6 1566 aa19.78■□□□□ 0.76
SNORD55-201ENST00000581525 MYOM3Q5VTT5 1437 aa19.77■□□□□ 0.76
SNORD55-201ENST00000581525 C9orf84Q5VXU9 1444 aa19.77■□□□□ 0.76
SNORD55-201ENST00000581525 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
SNORD55-201ENST00000581525 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
SNORD55-201ENST00000581525 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
SNORD55-201ENST00000581525 ADAMTSL3P82987 1691 aa19.75■□□□□ 0.75
SNORD55-201ENST00000581525 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
SNORD55-201ENST00000581525 CAMSAP2Q08AD1 1489 aa19.73■□□□□ 0.75
SNORD55-201ENST00000581525 BCORL1Q5H9F3 1711 aa19.73■□□□□ 0.75
SNORD55-201ENST00000581525 SIGLEC1Q9BZZ2 1709 aa19.73■□□□□ 0.75
SNORD55-201ENST00000581525 ARID4BQ4LE39 1312 aaPredicted RBP19.72■□□□□ 0.75
SNORD55-201ENST00000581525 AGLP35573 1532 aa19.71■□□□□ 0.75
SNORD55-201ENST00000581525 ABCA6Q8N139 1617 aa19.71■□□□□ 0.75
SNORD55-201ENST00000581525 ARHGEF5Q12774 1597 aa19.7■□□□□ 0.74
SNORD55-201ENST00000581525 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
SNORD55-201ENST00000581525 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
SNORD55-201ENST00000581525 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
SNORD55-201ENST00000581525 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
SNORD55-201ENST00000581525 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
SNORD55-201ENST00000581525 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
SNORD55-201ENST00000581525 TSPY4P0CV99 314 aa19.64■□□□□ 0.73
SNORD55-201ENST00000581525 TSPY10P0CW01 314 aa19.64■□□□□ 0.73
SNORD55-201ENST00000581525 PTPRMP28827 1452 aa19.64■□□□□ 0.73
SNORD55-201ENST00000581525 DHX29Q7Z478 1369 aaKnown RBP19.63■□□□□ 0.73
SNORD55-201ENST00000581525 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
SNORD55-201ENST00000581525 A2MP01023 1474 aa19.62■□□□□ 0.73
SNORD55-201ENST00000581525 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
SNORD55-201ENST00000581525 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
SNORD55-201ENST00000581525 PTPN23Q9H3S7 1636 aa19.59■□□□□ 0.73
SNORD55-201ENST00000581525 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
SNORD55-201ENST00000581525 ABCC5O15440 1437 aa19.59■□□□□ 0.73
SNORD55-201ENST00000581525 MLECQ14165 292 aa19.58■□□□□ 0.72
SNORD55-201ENST00000581525 ADGBQ8N7X0 1667 aa19.56■□□□□ 0.72
SNORD55-201ENST00000581525 SHANK2Q9UPX8 1470 aa19.55■□□□□ 0.72
SNORD55-201ENST00000581525 DAPK1P53355 1430 aa19.53■□□□□ 0.72
SNORD55-201ENST00000581525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNORD55-201ENST00000581525 CNTLNQ9NXG0 1405 aa19.51■□□□□ 0.71
SNORD55-201ENST00000581525 DNMT1P26358 1616 aaKnown RBP19.51■□□□□ 0.71
SNORD55-201ENST00000581525 RIMS1Q86UR5 1692 aaKnown RBP19.5■□□□□ 0.71
SNORD55-201ENST00000581525 FER1L4A9Z1Z3 1794 aa19.49■□□□□ 0.71
SNORD55-201ENST00000581525 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
SNORD55-201ENST00000581525 KIF3BO15066 747 aa19.46■□□□□ 0.71
SNORD55-201ENST00000581525 GGT6Q6P531 493 aa19.46■□□□□ 0.71
SNORD55-201ENST00000581525 ADGRL2O95490 1459 aa19.46■□□□□ 0.71
SNORD55-201ENST00000581525 CROCC2H7BZ55 1655 aa19.46■□□□□ 0.71
SNORD55-201ENST00000581525 DUOX2Q9NRD8 1548 aa19.45■□□□□ 0.7
SNORD55-201ENST00000581525 FAM135AQ9P2D6 1515 aa19.45■□□□□ 0.7
SNORD55-201ENST00000581525 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
SNORD55-201ENST00000581525 CEBPAP49715 358 aaPredicted RBP19.44■□□□□ 0.7
SNORD55-201ENST00000581525 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
SNORD55-201ENST00000581525 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
SNORD55-201ENST00000581525 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
SNORD55-201ENST00000581525 ANKRD30AQ9BXX3 1397 aa19.43■□□□□ 0.7
SNORD55-201ENST00000581525 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
SNORD55-201ENST00000581525 RRBP1Q9P2E9 1410 aaKnown RBP19.42■□□□□ 0.7
SNORD55-201ENST00000581525 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
SNORD55-201ENST00000581525 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms