RNA–Protein interactions for RNA: ENST00000581419.1

SKAP1-205, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 3

Gene SKAP1, Length 696 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-205ENST00000581419 SOCS7O14512 581 aa12.57□□□□□ -0.4
SKAP1-205ENST00000581419 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
SKAP1-205ENST00000581419 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
SKAP1-205ENST00000581419 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
SKAP1-205ENST00000581419 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
SKAP1-205ENST00000581419 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
SKAP1-205ENST00000581419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.4
SKAP1-205ENST00000581419 PPRC1Q5VV67 1664 aaKnown RBP12.52□□□□□ -0.4
SKAP1-205ENST00000581419 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
SKAP1-205ENST00000581419 PLCH2O75038 1416 aa12.52□□□□□ -0.41
SKAP1-205ENST00000581419 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
SKAP1-205ENST00000581419 KDM6BO15054 1643 aa12.51□□□□□ -0.41
SKAP1-205ENST00000581419 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
SKAP1-205ENST00000581419 NEO1Q92859 1461 aa12.51□□□□□ -0.41
SKAP1-205ENST00000581419 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
SKAP1-205ENST00000581419 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
SKAP1-205ENST00000581419 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
SKAP1-205ENST00000581419 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
SKAP1-205ENST00000581419 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
SKAP1-205ENST00000581419 APLP2Q06481 763 aa12.48□□□□□ -0.41
SKAP1-205ENST00000581419 KIF14Q15058 1648 aa12.47□□□□□ -0.41
SKAP1-205ENST00000581419 COL17A1Q9UMD9 1497 aaPredicted RBP12.46□□□□□ -0.41
SKAP1-205ENST00000581419 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
SKAP1-205ENST00000581419 FANCAO15360 1455 aa12.45□□□□□ -0.42
SKAP1-205ENST00000581419 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
SKAP1-205ENST00000581419 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
SKAP1-205ENST00000581419 TIAM1Q13009 1591 aa12.43□□□□□ -0.42
SKAP1-205ENST00000581419 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
SKAP1-205ENST00000581419 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
SKAP1-205ENST00000581419 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
SKAP1-205ENST00000581419 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
SKAP1-205ENST00000581419 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
SKAP1-205ENST00000581419 CFDP1Q9UEE9 299 aaPredicted RBP12.41□□□□□ -0.42
SKAP1-205ENST00000581419 CCNB3Q8WWL7 1395 aa12.41□□□□□ -0.42
SKAP1-205ENST00000581419 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
SKAP1-205ENST00000581419 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
SKAP1-205ENST00000581419 DENND4BO75064 1496 aaPredicted RBP12.4□□□□□ -0.43
SKAP1-205ENST00000581419 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
SKAP1-205ENST00000581419 SCAPERQ9BY12 1400 aa12.38□□□□□ -0.43
SKAP1-205ENST00000581419 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
SKAP1-205ENST00000581419 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
SKAP1-205ENST00000581419 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
SKAP1-205ENST00000581419 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
SKAP1-205ENST00000581419 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
SKAP1-205ENST00000581419 NCOA2Q15596 1464 aa12.36□□□□□ -0.43
SKAP1-205ENST00000581419 MAGI2Q86UL8 1455 aa12.36□□□□□ -0.43
SKAP1-205ENST00000581419 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
SKAP1-205ENST00000581419 CDC42BPAQ5VT25 1732 aa12.35□□□□□ -0.43
SKAP1-205ENST00000581419 SUPT6HQ7KZ85 1726 aaKnown RBP12.35□□□□□ -0.43
SKAP1-205ENST00000581419 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
SKAP1-205ENST00000581419 POGZQ7Z3K3 1410 aa12.34□□□□□ -0.43
SKAP1-205ENST00000581419 AFAP1Q8N556 730 aa12.33□□□□□ -0.44
SKAP1-205ENST00000581419 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
SKAP1-205ENST00000581419 MIA2Q96PC5 1412 aa12.33□□□□□ -0.44
SKAP1-205ENST00000581419 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
SKAP1-205ENST00000581419 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
SKAP1-205ENST00000581419 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
SKAP1-205ENST00000581419 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
SKAP1-205ENST00000581419 ITSN2Q9NZM3 1697 aa12.3□□□□□ -0.44
SKAP1-205ENST00000581419 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
SKAP1-205ENST00000581419 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
SKAP1-205ENST00000581419 ABCC1P33527 1531 aa12.3□□□□□ -0.44
SKAP1-205ENST00000581419 ARHGEF12Q9NZN5 1544 aa12.3□□□□□ -0.44
SKAP1-205ENST00000581419 FRMPD1Q5SYB0 1578 aa12.3□□□□□ -0.44
SKAP1-205ENST00000581419 MYOM3Q5VTT5 1437 aa12.29□□□□□ -0.44
SKAP1-205ENST00000581419 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
SKAP1-205ENST00000581419 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
SKAP1-205ENST00000581419 MBD5Q9P267 1494 aa12.28□□□□□ -0.44
SKAP1-205ENST00000581419 KDM5CP41229 1560 aa12.28□□□□□ -0.44
SKAP1-205ENST00000581419 SAMD9LQ8IVG5 1584 aa12.28□□□□□ -0.44
SKAP1-205ENST00000581419 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
SKAP1-205ENST00000581419 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
SKAP1-205ENST00000581419 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
SKAP1-205ENST00000581419 RTEL1-TNFRSF6BF6WH68 1400 aa12.26□□□□□ -0.45
SKAP1-205ENST00000581419 ATP10AO60312 1499 aa12.26□□□□□ -0.45
SKAP1-205ENST00000581419 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
SKAP1-205ENST00000581419 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
SKAP1-205ENST00000581419 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
SKAP1-205ENST00000581419 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
SKAP1-205ENST00000581419 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
SKAP1-205ENST00000581419 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
SKAP1-205ENST00000581419 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
SKAP1-205ENST00000581419 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
SKAP1-205ENST00000581419 ARHGEF40Q8TER5 1519 aa12.22□□□□□ -0.45
SKAP1-205ENST00000581419 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
SKAP1-205ENST00000581419 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
SKAP1-205ENST00000581419 FGD6Q6ZV73 1430 aa12.21□□□□□ -0.45
SKAP1-205ENST00000581419 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
SKAP1-205ENST00000581419 REREQ9P2R6 1566 aa12.21□□□□□ -0.46
SKAP1-205ENST00000581419 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
SKAP1-205ENST00000581419 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
SKAP1-205ENST00000581419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
SKAP1-205ENST00000581419 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
SKAP1-205ENST00000581419 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
SKAP1-205ENST00000581419 AGLP35573 1532 aa12.18□□□□□ -0.46
SKAP1-205ENST00000581419 ATP7AQ04656 1500 aa12.17□□□□□ -0.46
SKAP1-205ENST00000581419 PTPN23Q9H3S7 1636 aa12.17□□□□□ -0.46
SKAP1-205ENST00000581419 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
SKAP1-205ENST00000581419 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
SKAP1-205ENST00000581419 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms