RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PCF11O94913 1555 aaKnown RBP40.13■■■■■ 4.01
CDC42EP4-205ENST00000580315 LMTK3Q96Q04 1460 aa40.11■■■■■ 4.01
CDC42EP4-205ENST00000580315 RIMS1Q86UR5 1692 aaKnown RBP40.11■■■■■ 4.01
CDC42EP4-205ENST00000580315 CDK11AQ9UQ88 783 aaPredicted RBP40.09■■■■■ 4.01
CDC42EP4-205ENST00000580315 SIGLEC1Q9BZZ2 1709 aa40.06■■■■■ 4
CDC42EP4-205ENST00000580315 EFCAB2Q5VUJ9 269 aa40.06■■■■■ 4
CDC42EP4-205ENST00000580315 MLECQ14165 292 aa40■■■■□ 3.99
CDC42EP4-205ENST00000580315 FBXO41Q8TF61 875 aa40■■■■□ 3.99
CDC42EP4-205ENST00000580315 PLPPR3Q6T4P5 718 aa39.99■■■■□ 3.99
CDC42EP4-205ENST00000580315 CASKIN1Q8WXD9 1431 aa39.99■■■■□ 3.99
CDC42EP4-205ENST00000580315 TROQ12816 1431 aaPredicted RBP39.97■■■■□ 3.99
CDC42EP4-205ENST00000580315 MYO5CQ9NQX4 1742 aa39.96■■■■□ 3.99
CDC42EP4-205ENST00000580315 KIF14Q15058 1648 aa39.96■■■■□ 3.99
CDC42EP4-205ENST00000580315 ATP10AO60312 1499 aa39.94■■■■□ 3.98
CDC42EP4-205ENST00000580315 HSPA2P54652 639 aa39.91■■■■□ 3.98
CDC42EP4-205ENST00000580315 CEP162Q5TB80 1403 aa39.9■■■■□ 3.98
CDC42EP4-205ENST00000580315 C9orf84Q5VXU9 1444 aa39.89■■■■□ 3.98
CDC42EP4-205ENST00000580315 CCDC18Q5T9S5 1454 aa39.88■■■■□ 3.97
CDC42EP4-205ENST00000580315 FYCO1Q9BQS8 1478 aa39.88■■■■□ 3.97
CDC42EP4-205ENST00000580315 ARHGAP5Q13017 1502 aa39.86■■■■□ 3.97
CDC42EP4-205ENST00000580315 LOC105371045A0A1W2PR82 267 aa39.85■■■■□ 3.97
CDC42EP4-205ENST00000580315 AFAP1Q8N556 730 aa39.85■■■■□ 3.97
CDC42EP4-205ENST00000580315 ZNF518AQ6AHZ1 1483 aa39.85■■■■□ 3.97
CDC42EP4-205ENST00000580315 LRRIQ1Q96JM4 1722 aa39.83■■■■□ 3.97
CDC42EP4-205ENST00000580315 FER1L4A9Z1Z3 1794 aa39.83■■■■□ 3.97
CDC42EP4-205ENST00000580315 ARHGEF12Q9NZN5 1544 aa39.82■■■■□ 3.97
CDC42EP4-205ENST00000580315 KDM5CP41229 1560 aa39.78■■■■□ 3.96
CDC42EP4-205ENST00000580315 MYT1LQ9UL68 1186 aa39.72■■■■□ 3.95
CDC42EP4-205ENST00000580315 CDC42BPBQ9Y5S2 1711 aa39.69■■■■□ 3.94
CDC42EP4-205ENST00000580315 CEBPAP49715 358 aaPredicted RBP39.69■■■■□ 3.94
CDC42EP4-205ENST00000580315 DIP2CQ9Y2E4 1556 aa39.65■■■■□ 3.94
CDC42EP4-205ENST00000580315 MLH3Q9UHC1 1453 aa39.64■■■■□ 3.94
CDC42EP4-205ENST00000580315 PREX2Q70Z35 1606 aa39.63■■■■□ 3.93
CDC42EP4-205ENST00000580315 TRAPPC8Q9Y2L5 1435 aa39.63■■■■□ 3.93
CDC42EP4-205ENST00000580315 REREQ9P2R6 1566 aa39.6■■■■□ 3.93
CDC42EP4-205ENST00000580315 ABCC1P33527 1531 aa39.6■■■■□ 3.93
CDC42EP4-205ENST00000580315 ABCA6Q8N139 1617 aa39.57■■■■□ 3.92
CDC42EP4-205ENST00000580315 PREX1Q8TCU6 1659 aa39.56■■■■□ 3.92
CDC42EP4-205ENST00000580315 CERKQ8TCT0 537 aa39.51■■■■□ 3.92
CDC42EP4-205ENST00000580315 ITSN2Q9NZM3 1697 aa39.5■■■■□ 3.91
CDC42EP4-205ENST00000580315 AGLP35573 1532 aa39.5■■■■□ 3.91
CDC42EP4-205ENST00000580315 CDC42BPAQ5VT25 1732 aa39.48■■■■□ 3.91
CDC42EP4-205ENST00000580315 UHRF1BP1Q6BDS2 1440 aa39.47■■■■□ 3.91
CDC42EP4-205ENST00000580315 MTUS2Q5JR59 1369 aa39.46■■■■□ 3.91
CDC42EP4-205ENST00000580315 VPS8Q8N3P4 1428 aa39.44■■■■□ 3.9
CDC42EP4-205ENST00000580315 ZNF777Q9ULD5 760 aaPredicted RBP39.44■■■■□ 3.9
CDC42EP4-205ENST00000580315 ESF1Q9H501 851 aaKnown RBP39.43■■■■□ 3.9
CDC42EP4-205ENST00000580315 KIDINS220Q9ULH0 1771 aa39.43■■■■□ 3.9
CDC42EP4-205ENST00000580315 SETD1BQ9UPS6 1966 aaKnown RBP39.41■■■■□ 3.9
CDC42EP4-205ENST00000580315 GPATCH8Q9UKJ3 1502 aaKnown RBP39.4■■■■□ 3.9
CDC42EP4-205ENST00000580315 DMRT2Q9Y5R5 561 aa39.39■■■■□ 3.9
CDC42EP4-205ENST00000580315 C3P01024 1663 aa39.37■■■■□ 3.89
CDC42EP4-205ENST00000580315 SAMD9LQ8IVG5 1584 aa39.37■■■■□ 3.89
CDC42EP4-205ENST00000580315 STRCQ7RTU9 1775 aa39.35■■■■□ 3.89
CDC42EP4-205ENST00000580315 HNRNPMP52272 730 aaKnown RBP eCLIP39.34■■■■□ 3.89
CDC42EP4-205ENST00000580315 EHBP1L1Q8N3D4 1523 aa39.33■■■■□ 3.89
CDC42EP4-205ENST00000580315 SYCP2Q9BX26 1530 aa39.33■■■■□ 3.89
CDC42EP4-205ENST00000580315 SPAG9O60271 1321 aaKnown RBP39.32■■■■□ 3.88
CDC42EP4-205ENST00000580315 CNTLNQ9NXG0 1405 aa39.31■■■■□ 3.88
CDC42EP4-205ENST00000580315 CFDP1Q9UEE9 299 aaPredicted RBP39.29■■■■□ 3.88
CDC42EP4-205ENST00000580315 CCNB3Q8WWL7 1395 aa39.28■■■■□ 3.88
CDC42EP4-205ENST00000580315 KIAA1107Q9UPP5 1409 aa39.27■■■■□ 3.88
CDC42EP4-205ENST00000580315 TIAM1Q13009 1591 aa39.23■■■■□ 3.87
CDC42EP4-205ENST00000580315 PLEKHH2Q8IVE3 1493 aa39.23■■■■□ 3.87
CDC42EP4-205ENST00000580315 PTPRTO14522 1441 aa39.2■■■■□ 3.87
CDC42EP4-205ENST00000580315 ATP7AQ04656 1500 aa39.19■■■■□ 3.86
CDC42EP4-205ENST00000580315 ZMYM3Q14202 1370 aa39.17■■■■□ 3.86
CDC42EP4-205ENST00000580315 NPATQ14207 1427 aa39.14■■■■□ 3.86
CDC42EP4-205ENST00000580315 INO80Q9ULG1 1556 aaPredicted RBP39.13■■■■□ 3.85
CDC42EP4-205ENST00000580315 SUPT6HQ7KZ85 1726 aaKnown RBP39.13■■■■□ 3.85
CDC42EP4-205ENST00000580315 A2MP01023 1474 aa39.12■■■■□ 3.85
CDC42EP4-205ENST00000580315 MAP3K1Q13233 1512 aa39.12■■■■□ 3.85
CDC42EP4-205ENST00000580315 MROH2AA6NES4 1674 aa39.12■■■■□ 3.85
CDC42EP4-205ENST00000580315 PLXNC1O60486 1568 aa39.11■■■■□ 3.85
CDC42EP4-205ENST00000580315 NCOA1Q15788 1441 aa39.1■■■■□ 3.85
CDC42EP4-205ENST00000580315 LRRC9Q6ZRR7 1453 aa39.1■■■■□ 3.85
CDC42EP4-205ENST00000580315 ZNF644Q9H582 1327 aaPredicted RBP39.09■■■■□ 3.85
CDC42EP4-205ENST00000580315 APLP2Q06481 763 aa39.08■■■■□ 3.85
CDC42EP4-205ENST00000580315 NCOA2Q15596 1464 aa39.08■■■■□ 3.85
CDC42EP4-205ENST00000580315 GGT6Q6P531 493 aa39.04■■■■□ 3.84
CDC42EP4-205ENST00000580315 MBD5Q9P267 1494 aa39■■■■□ 3.83
CDC42EP4-205ENST00000580315 CLTCQ00610 1675 aaKnown RBP39■■■■□ 3.83
CDC42EP4-205ENST00000580315 CAMSAP1Q5T5Y3 1602 aa39■■■■□ 3.83
CDC42EP4-205ENST00000580315 KANK4Q5T7N3 995 aaPredicted RBP38.98■■■■□ 3.83
CDC42EP4-205ENST00000580315 LTBP4Q8N2S1 1624 aa38.97■■■■□ 3.83
CDC42EP4-205ENST00000580315 PPP6R1Q9UPN7 881 aa38.96■■■■□ 3.83
CDC42EP4-205ENST00000580315 PTPRKQ15262 1439 aa38.96■■■■□ 3.83
CDC42EP4-205ENST00000580315 ADGBQ8N7X0 1667 aa38.94■■■■□ 3.82
CDC42EP4-205ENST00000580315 RTEL1-TNFRSF6BF6WH68 1400 aa38.92■■■■□ 3.82
CDC42EP4-205ENST00000580315 NCKAP5LQ9HCH0 1330 aa38.91■■■■□ 3.82
CDC42EP4-205ENST00000580315 MYO3AQ8NEV4 1616 aa38.87■■■■□ 3.81
CDC42EP4-205ENST00000580315 DHX29Q7Z478 1369 aaKnown RBP38.86■■■■□ 3.81
CDC42EP4-205ENST00000580315 ZNF142P52746 1687 aaPredicted RBP38.84■■■■□ 3.81
CDC42EP4-205ENST00000580315 IQSEC2Q5JU85 1478 aa38.84■■■■□ 3.81
CDC42EP4-205ENST00000580315 CEP170BQ9Y4F5 1589 aaPredicted RBP38.83■■■■□ 3.81
CDC42EP4-205ENST00000580315 PKD2Q13563 968 aa38.83■■■■□ 3.81
CDC42EP4-205ENST00000580315 PLA2R1Q13018 1463 aa38.83■■■■□ 3.81
CDC42EP4-205ENST00000580315 CAMSAP2Q08AD1 1489 aa38.8■■■■□ 3.8
CDC42EP4-205ENST00000580315 ZNF335Q9H4Z2 1342 aaPredicted RBP38.78■■■■□ 3.8
CDC42EP4-205ENST00000580315 TCOF1Q13428 1488 aaKnown RBP38.78■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms