RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 P3H3Q8IVL6 736 aa4.29□□□□□ -1.72
SNORD53-201ENST00000579969 NCOA1Q15788 1441 aa4.29□□□□□ -1.72
SNORD53-201ENST00000579969 FRMPD1Q5SYB0 1578 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 TTC37Q6PGP7 1564 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 MYT1LQ9UL68 1186 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 ATP10AO60312 1499 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 MAGI2Q86UL8 1455 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 TRAPPC8Q9Y2L5 1435 aa4.28□□□□□ -1.72
SNORD53-201ENST00000579969 ABCA8O94911 1581 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 FER1L4A9Z1Z3 1794 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 ARHGEF12Q9NZN5 1544 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 UPF1Q92900 1129 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNORD53-201ENST00000579969 PPP6R1Q9UPN7 881 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 KIAA0556O60303 1618 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 ABCA9Q8IUA7 1624 aa4.27□□□□□ -1.73
SNORD53-201ENST00000579969 SCAPERQ9BY12 1400 aa4.26□□□□□ -1.73
SNORD53-201ENST00000579969 SIGLEC1Q9BZZ2 1709 aa4.26□□□□□ -1.73
SNORD53-201ENST00000579969 EFCAB5A4FU69 1503 aa4.26□□□□□ -1.73
SNORD53-201ENST00000579969 ZFYVE16Q7Z3T8 1539 aa4.26□□□□□ -1.73
SNORD53-201ENST00000579969 SRCAPQ6ZRS2 3230 aa4.25□□□□□ -1.73
SNORD53-201ENST00000579969 GOLGA3Q08378 1498 aa4.25□□□□□ -1.73
SNORD53-201ENST00000579969 RAPGEF2Q9Y4G8 1499 aa4.25□□□□□ -1.73
SNORD53-201ENST00000579969 AFAP1Q8N556 730 aa4.25□□□□□ -1.73
SNORD53-201ENST00000579969 CAMSAP1Q5T5Y3 1602 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 RICTORQ6R327 1708 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 PTPRKQ15262 1439 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 C9orf84Q5VXU9 1444 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 EFCAB2Q5VUJ9 269 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 HECW1Q76N89 1606 aa4.24□□□□□ -1.73
SNORD53-201ENST00000579969 ZMYM4Q5VZL5 1548 aa4.23□□□□□ -1.73
SNORD53-201ENST00000579969 ZMYM3Q14202 1370 aa4.23□□□□□ -1.73
SNORD53-201ENST00000579969 SHANK2Q9UPX8 1470 aa4.22□□□□□ -1.73
SNORD53-201ENST00000579969 ANKLE2Q86XL3 938 aa4.21□□□□□ -1.74
SNORD53-201ENST00000579969 TRIM52Q96A61 297 aa4.21□□□□□ -1.74
SNORD53-201ENST00000579969 C3P01024 1663 aa4.21□□□□□ -1.74
SNORD53-201ENST00000579969 NPATQ14207 1427 aa4.21□□□□□ -1.74
SNORD53-201ENST00000579969 PLA2R1Q13018 1463 aa4.2□□□□□ -1.74
SNORD53-201ENST00000579969 TCOF1Q13428 1488 aaKnown RBP4.2□□□□□ -1.74
SNORD53-201ENST00000579969 CPS1P31327 1500 aa4.2□□□□□ -1.74
SNORD53-201ENST00000579969 PLCH2O75038 1416 aa4.2□□□□□ -1.74
SNORD53-201ENST00000579969 CNTLNQ9NXG0 1405 aa4.2□□□□□ -1.74
SNORD53-201ENST00000579969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.18□□□□□ -1.74
SNORD53-201ENST00000579969 RXRBP28702 533 aa4.18□□□□□ -1.74
SNORD53-201ENST00000579969 RANGAP1P46060 587 aaPredicted RBP4.18□□□□□ -1.74
SNORD53-201ENST00000579969 ZNF772Q68DY9 489 aaPredicted RBP4.18□□□□□ -1.74
SNORD53-201ENST00000579969 GGT6Q6P531 493 aa4.18□□□□□ -1.74
SNORD53-201ENST00000579969 THEMISQ8N1K5 641 aaPredicted RBP4.18□□□□□ -1.74
SNORD53-201ENST00000579969 ZRANB1Q9UGI0 708 aa4.18□□□□□ -1.74
SNORD53-201ENST00000579969 CFAP74Q9C0B2 1584 aa4.18□□□□□ -1.74
SNORD53-201ENST00000579969 ALKQ9UM73 1620 aa4.17□□□□□ -1.74
SNORD53-201ENST00000579969 AGLP35573 1532 aa4.17□□□□□ -1.74
SNORD53-201ENST00000579969 FOXD1Q16676 465 aa4.17□□□□□ -1.74
SNORD53-201ENST00000579969 NUP153P49790 1475 aaKnown RBP4.17□□□□□ -1.74
SNORD53-201ENST00000579969 FAM135BQ49AJ0 1406 aa4.16□□□□□ -1.74
SNORD53-201ENST00000579969 RBM33Q96EV2 1170 aaKnown RBP4.16□□□□□ -1.74
SNORD53-201ENST00000579969 ATP1B4Q9UN42 357 aaPredicted RBP4.16□□□□□ -1.74
SNORD53-201ENST00000579969 ZNF518AQ6AHZ1 1483 aa4.16□□□□□ -1.74
SNORD53-201ENST00000579969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.15□□□□□ -1.74
SNORD53-201ENST00000579969 SETD1AO15047 1707 aaKnown RBP4.15□□□□□ -1.74
SNORD53-201ENST00000579969 RAPGEF6Q8TEU7 1601 aa4.15□□□□□ -1.74
SNORD53-201ENST00000579969 MEX3CQ5U5Q3 659 aaKnown RBP4.15□□□□□ -1.75
SNORD53-201ENST00000579969 FBXO31Q5XUX0 539 aaPredicted RBP4.15□□□□□ -1.75
SNORD53-201ENST00000579969 CDK11AQ9UQ88 783 aaPredicted RBP4.15□□□□□ -1.75
SNORD53-201ENST00000579969 MLH3Q9UHC1 1453 aa4.15□□□□□ -1.75
SNORD53-201ENST00000579969 LRRC7Q96NW7 1537 aa4.15□□□□□ -1.75
SNORD53-201ENST00000579969 A2ML1A8K2U0 1454 aa4.14□□□□□ -1.75
SNORD53-201ENST00000579969 NUTM2BA6NNL0 878 aaPredicted RBP4.14□□□□□ -1.75
SNORD53-201ENST00000579969 NUTM2EB1AL46 878 aaPredicted RBP4.14□□□□□ -1.75
SNORD53-201ENST00000579969 IFFO2Q5TF58 517 aa4.14□□□□□ -1.75
SNORD53-201ENST00000579969 NUTM2DQ5VT03 806 aaPredicted RBP4.14□□□□□ -1.75
SNORD53-201ENST00000579969 NUTM2AQ8IVF1 878 aaPredicted RBP4.14□□□□□ -1.75
SNORD53-201ENST00000579969 VWDEQ8N2E2 1590 aa4.14□□□□□ -1.75
SNORD53-201ENST00000579969 REREQ9P2R6 1566 aa4.14□□□□□ -1.75
SNORD53-201ENST00000579969 DIP2CQ9Y2E4 1556 aa4.14□□□□□ -1.75
SNORD53-201ENST00000579969 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
SNORD53-201ENST00000579969 NPHP4O75161 1426 aaPredicted RBP4.13□□□□□ -1.75
SNORD53-201ENST00000579969 CTTNBP2Q8WZ74 1663 aa4.13□□□□□ -1.75
SNORD53-201ENST00000579969 SUPT6HQ7KZ85 1726 aaKnown RBP4.13□□□□□ -1.75
SNORD53-201ENST00000579969 JCADQ9P266 1359 aa4.13□□□□□ -1.75
SNORD53-201ENST00000579969 KDM5CP41229 1560 aa4.12□□□□□ -1.75
SNORD53-201ENST00000579969 HNRNPMP52272 730 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 PROSER2Q86WR7 435 aaPredicted RBP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 QTRT2Q9H974 415 aaKnown RBP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 SLAIN2Q9P270 581 aa4.12□□□□□ -1.75
SNORD53-201ENST00000579969 ZNF777Q9ULD5 760 aaPredicted RBP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 DNMT1P26358 1616 aaKnown RBP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 SPAG9O60271 1321 aaKnown RBP4.12□□□□□ -1.75
SNORD53-201ENST00000579969 TNRQ92752 1358 aa4.12□□□□□ -1.75
SNORD53-201ENST00000579969 MED14O60244 1454 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 PRXQ9BXM0 1461 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 NEURL4Q96JN8 1562 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 MROH2AA6NES4 1674 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 RBM6P78332 1123 aaKnown RBP4.11□□□□□ -1.75
SNORD53-201ENST00000579969 TXNDC2Q86VQ3 553 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 SPATA31A6Q5VVP1 1343 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 ARHGAP5Q13017 1502 aa4.11□□□□□ -1.75
SNORD53-201ENST00000579969 ABCA6Q8N139 1617 aa4.1□□□□□ -1.75
SNORD53-201ENST00000579969 MYO3AQ8NEV4 1616 aa4.1□□□□□ -1.75
SNORD53-201ENST00000579969 ZNF142P52746 1687 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms