RNA–Protein interactions for RNA: ENST00000579843.5

TRIM16-218, Transcript of tripartite motif containing 16, humanhuman

TSL 4

Gene TRIM16, Length 459 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-218ENST00000579843 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
TRIM16-218ENST00000579843 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
TRIM16-218ENST00000579843 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
TRIM16-218ENST00000579843 EFCAB5A4FU69 1503 aa12.48□□□□□ -0.41
TRIM16-218ENST00000579843 POTEAQ6S8J7 498 aa12.48□□□□□ -0.41
TRIM16-218ENST00000579843 RICTORQ6R327 1708 aa12.48□□□□□ -0.41
TRIM16-218ENST00000579843 ATP10BO94823 1461 aa12.47□□□□□ -0.41
TRIM16-218ENST00000579843 ZMYM4Q5VZL5 1548 aa12.46□□□□□ -0.42
TRIM16-218ENST00000579843 MAGI2Q86UL8 1455 aa12.46□□□□□ -0.42
TRIM16-218ENST00000579843 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
TRIM16-218ENST00000579843 ATP10AO60312 1499 aa12.43□□□□□ -0.42
TRIM16-218ENST00000579843 CAMSAP1Q5T5Y3 1602 aa12.43□□□□□ -0.42
TRIM16-218ENST00000579843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
TRIM16-218ENST00000579843 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
TRIM16-218ENST00000579843 C9orf84Q5VXU9 1444 aa12.41□□□□□ -0.42
TRIM16-218ENST00000579843 PKD2Q13563 968 aa12.4□□□□□ -0.42
TRIM16-218ENST00000579843 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
TRIM16-218ENST00000579843 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
TRIM16-218ENST00000579843 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRIM16-218ENST00000579843 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
TRIM16-218ENST00000579843 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
TRIM16-218ENST00000579843 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
TRIM16-218ENST00000579843 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
TRIM16-218ENST00000579843 C3P01024 1663 aa12.35□□□□□ -0.43
TRIM16-218ENST00000579843 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
TRIM16-218ENST00000579843 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
TRIM16-218ENST00000579843 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
TRIM16-218ENST00000579843 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
TRIM16-218ENST00000579843 ALKQ9UM73 1620 aa12.32□□□□□ -0.44
TRIM16-218ENST00000579843 CPS1P31327 1500 aa12.32□□□□□ -0.44
TRIM16-218ENST00000579843 PLA2R1Q13018 1463 aa12.31□□□□□ -0.44
TRIM16-218ENST00000579843 TCOF1Q13428 1488 aaKnown RBP12.31□□□□□ -0.44
TRIM16-218ENST00000579843 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
TRIM16-218ENST00000579843 SHANK2Q9UPX8 1470 aa12.28□□□□□ -0.44
TRIM16-218ENST00000579843 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
TRIM16-218ENST00000579843 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
TRIM16-218ENST00000579843 NPATQ14207 1427 aa12.27□□□□□ -0.45
TRIM16-218ENST00000579843 CNTLNQ9NXG0 1405 aa12.25□□□□□ -0.45
TRIM16-218ENST00000579843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM16-218ENST00000579843 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
TRIM16-218ENST00000579843 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
TRIM16-218ENST00000579843 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
TRIM16-218ENST00000579843 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
TRIM16-218ENST00000579843 AGLP35573 1532 aa12.21□□□□□ -0.46
TRIM16-218ENST00000579843 PLCH2O75038 1416 aa12.19□□□□□ -0.46
TRIM16-218ENST00000579843 CEP170BQ9Y4F5 1589 aaPredicted RBP12.18□□□□□ -0.46
TRIM16-218ENST00000579843 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
TRIM16-218ENST00000579843 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
TRIM16-218ENST00000579843 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
TRIM16-218ENST00000579843 ZNF518AQ6AHZ1 1483 aa12.16□□□□□ -0.46
TRIM16-218ENST00000579843 RAPGEF6Q8TEU7 1601 aa12.16□□□□□ -0.46
TRIM16-218ENST00000579843 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
TRIM16-218ENST00000579843 CTTNBP2Q8WZ74 1663 aa12.16□□□□□ -0.46
TRIM16-218ENST00000579843 VWDEQ8N2E2 1590 aa12.14□□□□□ -0.47
TRIM16-218ENST00000579843 ZNF142P52746 1687 aaPredicted RBP12.14□□□□□ -0.47
TRIM16-218ENST00000579843 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
TRIM16-218ENST00000579843 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
TRIM16-218ENST00000579843 LRRC7Q96NW7 1537 aa12.12□□□□□ -0.47
TRIM16-218ENST00000579843 KDM5CP41229 1560 aa12.12□□□□□ -0.47
TRIM16-218ENST00000579843 NEURL4Q96JN8 1562 aa12.12□□□□□ -0.47
TRIM16-218ENST00000579843 ANKLE2Q86XL3 938 aa12.11□□□□□ -0.47
TRIM16-218ENST00000579843 ABCA6Q8N139 1617 aa12.1□□□□□ -0.47
TRIM16-218ENST00000579843 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
TRIM16-218ENST00000579843 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
TRIM16-218ENST00000579843 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
TRIM16-218ENST00000579843 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
TRIM16-218ENST00000579843 FAM135BQ49AJ0 1406 aa12.09□□□□□ -0.47
TRIM16-218ENST00000579843 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
TRIM16-218ENST00000579843 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
TRIM16-218ENST00000579843 RXRBP28702 533 aa12.07□□□□□ -0.48
TRIM16-218ENST00000579843 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
TRIM16-218ENST00000579843 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
TRIM16-218ENST00000579843 DNMT1P26358 1616 aaKnown RBP12.07□□□□□ -0.48
TRIM16-218ENST00000579843 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
TRIM16-218ENST00000579843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM16-218ENST00000579843 POLR1AO95602 1720 aaPredicted RBP12.03□□□□□ -0.48
TRIM16-218ENST00000579843 FOXD1Q16676 465 aa12.03□□□□□ -0.48
TRIM16-218ENST00000579843 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
TRIM16-218ENST00000579843 MEX3CQ5U5Q3 659 aaKnown RBP12.02□□□□□ -0.49
TRIM16-218ENST00000579843 STRCP1A6NGW2 1772 aa12.01□□□□□ -0.49
TRIM16-218ENST00000579843 GGT6Q6P531 493 aa12.01□□□□□ -0.49
TRIM16-218ENST00000579843 THEMISQ8N1K5 641 aaPredicted RBP12.01□□□□□ -0.49
TRIM16-218ENST00000579843 MED14O60244 1454 aa12.01□□□□□ -0.49
TRIM16-218ENST00000579843 JCADQ9P266 1359 aa12□□□□□ -0.49
TRIM16-218ENST00000579843 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
TRIM16-218ENST00000579843 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
TRIM16-218ENST00000579843 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
TRIM16-218ENST00000579843 SYNMO15061 1565 aa11.99□□□□□ -0.49
TRIM16-218ENST00000579843 SAMD9Q5K651 1589 aa11.99□□□□□ -0.49
TRIM16-218ENST00000579843 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
TRIM16-218ENST00000579843 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
TRIM16-218ENST00000579843 ABCC1P33527 1531 aa11.97□□□□□ -0.49
TRIM16-218ENST00000579843 CDK13Q14004 1512 aaKnown RBP11.97□□□□□ -0.49
TRIM16-218ENST00000579843 TNRQ92752 1358 aa11.97□□□□□ -0.49
TRIM16-218ENST00000579843 NUTM2BA6NNL0 878 aaPredicted RBP11.97□□□□□ -0.49
TRIM16-218ENST00000579843 NUTM2EB1AL46 878 aaPredicted RBP11.97□□□□□ -0.49
TRIM16-218ENST00000579843 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
TRIM16-218ENST00000579843 NUTM2AQ8IVF1 878 aaPredicted RBP11.97□□□□□ -0.49
TRIM16-218ENST00000579843 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
TRIM16-218ENST00000579843 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms