RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-213ENST00000579609 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
PPP4R1-213ENST00000579609 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-213ENST00000579609 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-213ENST00000579609 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-213ENST00000579609 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-213ENST00000579609 ROCK1Q13464 1354 aa12.95□□□□□ -0.34
PPP4R1-213ENST00000579609 CHD1O14646 1710 aa12.95□□□□□ -0.34
PPP4R1-213ENST00000579609 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-213ENST00000579609 NAIPQ13075 1403 aa12.94□□□□□ -0.34
PPP4R1-213ENST00000579609 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
PPP4R1-213ENST00000579609 DIEXFQ68CQ4 756 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-213ENST00000579609 ADGBQ8N7X0 1667 aa12.91□□□□□ -0.34
PPP4R1-213ENST00000579609 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-213ENST00000579609 KIF14Q15058 1648 aa12.9□□□□□ -0.34
PPP4R1-213ENST00000579609 CROCC2H7BZ55 1655 aa12.89□□□□□ -0.35
PPP4R1-213ENST00000579609 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
PPP4R1-213ENST00000579609 ADGRL2O95490 1459 aa12.87□□□□□ -0.35
PPP4R1-213ENST00000579609 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
PPP4R1-213ENST00000579609 DAPK1P53355 1430 aa12.87□□□□□ -0.35
PPP4R1-213ENST00000579609 PLB1Q6P1J6 1458 aa12.86□□□□□ -0.35
PPP4R1-213ENST00000579609 ITGAEP38570 1179 aa12.86□□□□□ -0.35
PPP4R1-213ENST00000579609 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
PPP4R1-213ENST00000579609 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
PPP4R1-213ENST00000579609 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-213ENST00000579609 PRG4Q92954 1404 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-213ENST00000579609 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
PPP4R1-213ENST00000579609 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
PPP4R1-213ENST00000579609 CAMSAP2Q08AD1 1489 aa12.83□□□□□ -0.36
PPP4R1-213ENST00000579609 PTPRGP23470 1445 aa12.82□□□□□ -0.36
PPP4R1-213ENST00000579609 ATP10BO94823 1461 aa12.82□□□□□ -0.36
PPP4R1-213ENST00000579609 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
PPP4R1-213ENST00000579609 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
PPP4R1-213ENST00000579609 ABCC2Q92887 1545 aa12.81□□□□□ -0.36
PPP4R1-213ENST00000579609 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
PPP4R1-213ENST00000579609 ABCC5O15440 1437 aa12.8□□□□□ -0.36
PPP4R1-213ENST00000579609 FBLN2P98095 1184 aa12.79□□□□□ -0.36
PPP4R1-213ENST00000579609 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
PPP4R1-213ENST00000579609 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
PPP4R1-213ENST00000579609 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
PPP4R1-213ENST00000579609 PLEKHH2Q8IVE3 1493 aa12.75□□□□□ -0.37
PPP4R1-213ENST00000579609 ARAP3Q8WWN8 1544 aa12.74□□□□□ -0.37
PPP4R1-213ENST00000579609 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
PPP4R1-213ENST00000579609 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
PPP4R1-213ENST00000579609 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-213ENST00000579609 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
PPP4R1-213ENST00000579609 ANKRD30AQ9BXX3 1397 aa12.73□□□□□ -0.37
PPP4R1-213ENST00000579609 CENPBP07199 599 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-213ENST00000579609 MYO5CQ9NQX4 1742 aa12.73□□□□□ -0.37
PPP4R1-213ENST00000579609 CDC42BPBQ9Y5S2 1711 aa12.72□□□□□ -0.37
PPP4R1-213ENST00000579609 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-213ENST00000579609 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
PPP4R1-213ENST00000579609 KDM6BO15054 1643 aa12.71□□□□□ -0.37
PPP4R1-213ENST00000579609 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.38
PPP4R1-213ENST00000579609 KIAA1107Q9UPP5 1409 aa12.7□□□□□ -0.38
PPP4R1-213ENST00000579609 FKBP8Q14318 412 aa12.69□□□□□ -0.38
PPP4R1-213ENST00000579609 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-213ENST00000579609 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
PPP4R1-213ENST00000579609 CCDC141Q6ZP82 1450 aa12.68□□□□□ -0.38
PPP4R1-213ENST00000579609 SAMD9LQ8IVG5 1584 aa12.68□□□□□ -0.38
PPP4R1-213ENST00000579609 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
PPP4R1-213ENST00000579609 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-213ENST00000579609 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
PPP4R1-213ENST00000579609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.66□□□□□ -0.38
PPP4R1-213ENST00000579609 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
PPP4R1-213ENST00000579609 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
PPP4R1-213ENST00000579609 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
PPP4R1-213ENST00000579609 PZPP20742 1482 aa12.65□□□□□ -0.38
PPP4R1-213ENST00000579609 ANKRD50Q9ULJ7 1429 aa12.64□□□□□ -0.39
PPP4R1-213ENST00000579609 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
PPP4R1-213ENST00000579609 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
PPP4R1-213ENST00000579609 UNC13BO14795 1591 aa12.63□□□□□ -0.39
PPP4R1-213ENST00000579609 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
PPP4R1-213ENST00000579609 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
PPP4R1-213ENST00000579609 POLR1AO95602 1720 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-213ENST00000579609 TEX14Q8IWB6 1497 aa12.61□□□□□ -0.39
PPP4R1-213ENST00000579609 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
PPP4R1-213ENST00000579609 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
PPP4R1-213ENST00000579609 ARHGEF12Q9NZN5 1544 aa12.61□□□□□ -0.39
PPP4R1-213ENST00000579609 ZNF644Q9H582 1327 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-213ENST00000579609 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
PPP4R1-213ENST00000579609 TRIM52Q96A61 297 aa12.6□□□□□ -0.39
PPP4R1-213ENST00000579609 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
PPP4R1-213ENST00000579609 PLCH2O75038 1416 aa12.6□□□□□ -0.39
PPP4R1-213ENST00000579609 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
PPP4R1-213ENST00000579609 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
PPP4R1-213ENST00000579609 ABCC1P33527 1531 aa12.58□□□□□ -0.4
PPP4R1-213ENST00000579609 MIER1Q8N108 512 aa12.58□□□□□ -0.4
PPP4R1-213ENST00000579609 ABCA9Q8IUA7 1624 aa12.58□□□□□ -0.4
PPP4R1-213ENST00000579609 MAGI2Q86UL8 1455 aa12.58□□□□□ -0.4
PPP4R1-213ENST00000579609 DUOX2Q9NRD8 1548 aa12.57□□□□□ -0.4
PPP4R1-213ENST00000579609 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-213ENST00000579609 SYCP2Q9BX26 1530 aa12.57□□□□□ -0.4
PPP4R1-213ENST00000579609 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
PPP4R1-213ENST00000579609 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
PPP4R1-213ENST00000579609 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
PPP4R1-213ENST00000579609 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
PPP4R1-213ENST00000579609 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
PPP4R1-213ENST00000579609 ATP10AO60312 1499 aa12.53□□□□□ -0.4
PPP4R1-213ENST00000579609 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms