RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 SCAPERQ9BY12 1400 aa6.34□□□□□ -1.39
NUP85-209ENST00000578987 FER1L4A9Z1Z3 1794 aa6.34□□□□□ -1.39
NUP85-209ENST00000578987 CEBPAP49715 358 aaPredicted RBP6.34□□□□□ -1.39
NUP85-209ENST00000578987 KIF14Q15058 1648 aa6.34□□□□□ -1.39
NUP85-209ENST00000578987 ARHGAP35Q9NRY4 1499 aa6.34□□□□□ -1.4
NUP85-209ENST00000578987 CDC42BPBQ9Y5S2 1711 aa6.33□□□□□ -1.4
NUP85-209ENST00000578987 AFAP1Q8N556 730 aa6.33□□□□□ -1.4
NUP85-209ENST00000578987 PLCH2O75038 1416 aa6.33□□□□□ -1.4
NUP85-209ENST00000578987 ZFYVE16Q7Z3T8 1539 aa6.32□□□□□ -1.4
NUP85-209ENST00000578987 ARHGEF40Q8TER5 1519 aa6.32□□□□□ -1.4
NUP85-209ENST00000578987 EFCAB2Q5VUJ9 269 aa6.32□□□□□ -1.4
NUP85-209ENST00000578987 FBXO41Q8TF61 875 aa6.32□□□□□ -1.4
NUP85-209ENST00000578987 PCF11O94913 1555 aaKnown RBP6.31□□□□□ -1.4
NUP85-209ENST00000578987 LMTK3Q96Q04 1460 aa6.31□□□□□ -1.4
NUP85-209ENST00000578987 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
NUP85-209ENST00000578987 SETD1BQ9UPS6 1966 aaKnown RBP6.31□□□□□ -1.4
NUP85-209ENST00000578987 ZMYM4Q5VZL5 1548 aa6.3□□□□□ -1.4
NUP85-209ENST00000578987 FMN1Q68DA7 1419 aa6.3□□□□□ -1.4
NUP85-209ENST00000578987 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
NUP85-209ENST00000578987 ATP10AO60312 1499 aa6.29□□□□□ -1.4
NUP85-209ENST00000578987 CDC42BPAQ5VT25 1732 aa6.29□□□□□ -1.4
NUP85-209ENST00000578987 POGZQ7Z3K3 1410 aa6.29□□□□□ -1.4
NUP85-209ENST00000578987 ZNF777Q9ULD5 760 aaPredicted RBP6.29□□□□□ -1.4
NUP85-209ENST00000578987 STRCQ7RTU9 1775 aa6.29□□□□□ -1.4
NUP85-209ENST00000578987 MAGI2Q86UL8 1455 aa6.28□□□□□ -1.4
NUP85-209ENST00000578987 TROQ12816 1431 aaPredicted RBP6.28□□□□□ -1.4
NUP85-209ENST00000578987 SLC24A1O60721 1099 aa6.28□□□□□ -1.4
NUP85-209ENST00000578987 SUPT6HQ7KZ85 1726 aaKnown RBP6.28□□□□□ -1.4
NUP85-209ENST00000578987 C3P01024 1663 aa6.27□□□□□ -1.41
NUP85-209ENST00000578987 PREX1Q8TCU6 1659 aa6.27□□□□□ -1.41
NUP85-209ENST00000578987 ITSN2Q9NZM3 1697 aa6.27□□□□□ -1.41
NUP85-209ENST00000578987 ARHGEF12Q9NZN5 1544 aa6.27□□□□□ -1.41
NUP85-209ENST00000578987 HNRNPMP52272 730 aaKnown RBP eCLIP6.27□□□□□ -1.41
NUP85-209ENST00000578987 KIDINS220Q9ULH0 1771 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 CLIP1P30622 1438 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 C9orf84Q5VXU9 1444 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 TRAPPC8Q9Y2L5 1435 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 PREX2Q70Z35 1606 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 ABCA6Q8N139 1617 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 CERKQ8TCT0 537 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 ZNF518AQ6AHZ1 1483 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 DIP2CQ9Y2E4 1556 aa6.26□□□□□ -1.41
NUP85-209ENST00000578987 CASKIN1Q8WXD9 1431 aa6.25□□□□□ -1.41
NUP85-209ENST00000578987 KDM5CP41229 1560 aa6.24□□□□□ -1.41
NUP85-209ENST00000578987 ESF1Q9H501 851 aaKnown RBP6.24□□□□□ -1.41
NUP85-209ENST00000578987 SAMD9LQ8IVG5 1584 aa6.23□□□□□ -1.41
NUP85-209ENST00000578987 CFAP65Q6ZU64 1925 aaKnown RBP6.23□□□□□ -1.41
NUP85-209ENST00000578987 ABCC1P33527 1531 aa6.23□□□□□ -1.41
NUP85-209ENST00000578987 CLTCQ00610 1675 aaKnown RBP6.23□□□□□ -1.41
NUP85-209ENST00000578987 MLH3Q9UHC1 1453 aa6.22□□□□□ -1.41
NUP85-209ENST00000578987 SPAG9O60271 1321 aaKnown RBP6.22□□□□□ -1.41
NUP85-209ENST00000578987 ZNF644Q9H582 1327 aaPredicted RBP6.22□□□□□ -1.41
NUP85-209ENST00000578987 CCDC18Q5T9S5 1454 aa6.22□□□□□ -1.41
NUP85-209ENST00000578987 SYCP2Q9BX26 1530 aa6.21□□□□□ -1.42
NUP85-209ENST00000578987 GPATCH8Q9UKJ3 1502 aaKnown RBP6.21□□□□□ -1.42
NUP85-209ENST00000578987 GGT6Q6P531 493 aa6.21□□□□□ -1.42
NUP85-209ENST00000578987 CFDP1Q9UEE9 299 aaPredicted RBP6.21□□□□□ -1.42
NUP85-209ENST00000578987 UHRF1BP1Q6BDS2 1440 aa6.21□□□□□ -1.42
NUP85-209ENST00000578987 REREQ9P2R6 1566 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 LOC105371045A0A1W2PR82 267 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 DMRT2Q9Y5R5 561 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 FYCO1Q9BQS8 1478 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 NCKAP5LQ9HCH0 1330 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 AGLP35573 1532 aa6.2□□□□□ -1.42
NUP85-209ENST00000578987 ZMYM3Q14202 1370 aa6.19□□□□□ -1.42
NUP85-209ENST00000578987 MTUS2Q5JR59 1369 aa6.18□□□□□ -1.42
NUP85-209ENST00000578987 CCNB3Q8WWL7 1395 aa6.18□□□□□ -1.42
NUP85-209ENST00000578987 CAMSAP1Q5T5Y3 1602 aa6.18□□□□□ -1.42
NUP85-209ENST00000578987 MROH2AA6NES4 1674 aa6.18□□□□□ -1.42
NUP85-209ENST00000578987 ATP7AQ04656 1500 aa6.18□□□□□ -1.42
NUP85-209ENST00000578987 ADGBQ8N7X0 1667 aa6.17□□□□□ -1.42
NUP85-209ENST00000578987 ILDR2Q71H61 639 aa6.17□□□□□ -1.42
NUP85-209ENST00000578987 TIAM1Q13009 1591 aa6.17□□□□□ -1.42
NUP85-209ENST00000578987 A2MP01023 1474 aa6.16□□□□□ -1.42
NUP85-209ENST00000578987 INO80Q9ULG1 1556 aaPredicted RBP6.16□□□□□ -1.42
NUP85-209ENST00000578987 FBXO31Q5XUX0 539 aaPredicted RBP6.16□□□□□ -1.42
NUP85-209ENST00000578987 LTBP4Q8N2S1 1624 aa6.16□□□□□ -1.42
NUP85-209ENST00000578987 ZNF335Q9H4Z2 1342 aaPredicted RBP6.16□□□□□ -1.42
NUP85-209ENST00000578987 PTPRTO14522 1441 aa6.16□□□□□ -1.42
NUP85-209ENST00000578987 KIF3BO15066 747 aa6.15□□□□□ -1.42
NUP85-209ENST00000578987 DISP3Q9P2K9 1392 aa6.15□□□□□ -1.43
NUP85-209ENST00000578987 NCOA1Q15788 1441 aa6.15□□□□□ -1.43
NUP85-209ENST00000578987 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
NUP85-209ENST00000578987 KIAA1107Q9UPP5 1409 aa6.15□□□□□ -1.43
NUP85-209ENST00000578987 MYO3AQ8NEV4 1616 aa6.14□□□□□ -1.43
NUP85-209ENST00000578987 CEP162Q5TB80 1403 aa6.14□□□□□ -1.43
NUP85-209ENST00000578987 PLEKHH2Q8IVE3 1493 aa6.14□□□□□ -1.43
NUP85-209ENST00000578987 MBD5Q9P267 1494 aa6.14□□□□□ -1.43
NUP85-209ENST00000578987 PLXNC1O60486 1568 aa6.14□□□□□ -1.43
NUP85-209ENST00000578987 PTPRKQ15262 1439 aa6.13□□□□□ -1.43
NUP85-209ENST00000578987 DNMT1P26358 1616 aaKnown RBP6.13□□□□□ -1.43
NUP85-209ENST00000578987 ZNF142P52746 1687 aaPredicted RBP6.13□□□□□ -1.43
NUP85-209ENST00000578987 UBAP1LF5GYI3 381 aa6.12□□□□□ -1.43
NUP85-209ENST00000578987 POLR1AO95602 1720 aaPredicted RBP6.12□□□□□ -1.43
NUP85-209ENST00000578987 CAMSAP2Q08AD1 1489 aa6.12□□□□□ -1.43
NUP85-209ENST00000578987 NPATQ14207 1427 aa6.12□□□□□ -1.43
NUP85-209ENST00000578987 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
NUP85-209ENST00000578987 DHX29Q7Z478 1369 aaKnown RBP6.12□□□□□ -1.43
NUP85-209ENST00000578987 EHBP1L1Q8N3D4 1523 aa6.12□□□□□ -1.43
NUP85-209ENST00000578987 CEP170BQ9Y4F5 1589 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms