RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
CDH8-202ENST00000577228 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
CDH8-202ENST00000577228 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
CDH8-202ENST00000577228 EFCAB2Q5VUJ9 269 aa19.5■□□□□ 0.71
CDH8-202ENST00000577228 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
CDH8-202ENST00000577228 MYO5CQ9NQX4 1742 aa19.5■□□□□ 0.71
CDH8-202ENST00000577228 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
CDH8-202ENST00000577228 FBXO41Q8TF61 875 aa19.49■□□□□ 0.71
CDH8-202ENST00000577228 KIF14Q15058 1648 aa19.48■□□□□ 0.71
CDH8-202ENST00000577228 MLECQ14165 292 aa19.48■□□□□ 0.71
CDH8-202ENST00000577228 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
CDH8-202ENST00000577228 CLIP1P30622 1438 aa19.46■□□□□ 0.71
CDH8-202ENST00000577228 ATP10AO60312 1499 aa19.46■□□□□ 0.71
CDH8-202ENST00000577228 C9orf84Q5VXU9 1444 aa19.45■□□□□ 0.7
CDH8-202ENST00000577228 FER1L4A9Z1Z3 1794 aa19.44■□□□□ 0.7
CDH8-202ENST00000577228 ARHGAP5Q13017 1502 aa19.44■□□□□ 0.7
CDH8-202ENST00000577228 HSPA2P54652 639 aa19.43■□□□□ 0.7
CDH8-202ENST00000577228 ZNF518AQ6AHZ1 1483 aa19.42■□□□□ 0.7
CDH8-202ENST00000577228 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
CDH8-202ENST00000577228 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.7
CDH8-202ENST00000577228 KDM5CP41229 1560 aa19.39■□□□□ 0.69
CDH8-202ENST00000577228 AFAP1Q8N556 730 aa19.38■□□□□ 0.69
CDH8-202ENST00000577228 CCDC18Q5T9S5 1454 aa19.36■□□□□ 0.69
CDH8-202ENST00000577228 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
CDH8-202ENST00000577228 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
CDH8-202ENST00000577228 DIP2CQ9Y2E4 1556 aa19.33■□□□□ 0.69
CDH8-202ENST00000577228 CDC42BPBQ9Y5S2 1711 aa19.33■□□□□ 0.68
CDH8-202ENST00000577228 PREX2Q70Z35 1606 aa19.33■□□□□ 0.68
CDH8-202ENST00000577228 ABCC1P33527 1531 aa19.31■□□□□ 0.68
CDH8-202ENST00000577228 MLH3Q9UHC1 1453 aa19.31■□□□□ 0.68
CDH8-202ENST00000577228 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
CDH8-202ENST00000577228 REREQ9P2R6 1566 aa19.31■□□□□ 0.68
CDH8-202ENST00000577228 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
CDH8-202ENST00000577228 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
CDH8-202ENST00000577228 TRAPPC8Q9Y2L5 1435 aa19.29■□□□□ 0.68
CDH8-202ENST00000577228 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
CDH8-202ENST00000577228 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
CDH8-202ENST00000577228 AGLP35573 1532 aa19.25■□□□□ 0.67
CDH8-202ENST00000577228 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
CDH8-202ENST00000577228 CERKQ8TCT0 537 aa19.24■□□□□ 0.67
CDH8-202ENST00000577228 CDC42BPAQ5VT25 1732 aa19.24■□□□□ 0.67
CDH8-202ENST00000577228 ESF1Q9H501 851 aaKnown RBP19.22■□□□□ 0.67
CDH8-202ENST00000577228 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
CDH8-202ENST00000577228 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
CDH8-202ENST00000577228 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
CDH8-202ENST00000577228 C3P01024 1663 aa19.19■□□□□ 0.66
CDH8-202ENST00000577228 SETD1BQ9UPS6 1966 aaKnown RBP19.19■□□□□ 0.66
CDH8-202ENST00000577228 SAMD9LQ8IVG5 1584 aa19.19■□□□□ 0.66
CDH8-202ENST00000577228 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
CDH8-202ENST00000577228 GPATCH8Q9UKJ3 1502 aaKnown RBP19.17■□□□□ 0.66
CDH8-202ENST00000577228 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
CDH8-202ENST00000577228 STRCQ7RTU9 1775 aa19.16■□□□□ 0.66
CDH8-202ENST00000577228 SPAG9O60271 1321 aaKnown RBP19.15■□□□□ 0.66
CDH8-202ENST00000577228 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
CDH8-202ENST00000577228 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
CDH8-202ENST00000577228 CCNB3Q8WWL7 1395 aa19.13■□□□□ 0.65
CDH8-202ENST00000577228 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
CDH8-202ENST00000577228 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
CDH8-202ENST00000577228 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
CDH8-202ENST00000577228 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
CDH8-202ENST00000577228 PTPRTO14522 1441 aa19.1■□□□□ 0.65
CDH8-202ENST00000577228 MROH2AA6NES4 1674 aa19.08■□□□□ 0.65
CDH8-202ENST00000577228 INO80Q9ULG1 1556 aaPredicted RBP19.08■□□□□ 0.65
CDH8-202ENST00000577228 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
CDH8-202ENST00000577228 NPATQ14207 1427 aa19.08■□□□□ 0.64
CDH8-202ENST00000577228 A2MP01023 1474 aa19.07■□□□□ 0.64
CDH8-202ENST00000577228 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
CDH8-202ENST00000577228 NCOA1Q15788 1441 aa19.06■□□□□ 0.64
CDH8-202ENST00000577228 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
CDH8-202ENST00000577228 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
CDH8-202ENST00000577228 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
CDH8-202ENST00000577228 CLTCQ00610 1675 aaKnown RBP19.02■□□□□ 0.64
CDH8-202ENST00000577228 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
CDH8-202ENST00000577228 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
CDH8-202ENST00000577228 GGT6Q6P531 493 aa19■□□□□ 0.63
CDH8-202ENST00000577228 ADGBQ8N7X0 1667 aa18.99■□□□□ 0.63
CDH8-202ENST00000577228 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
CDH8-202ENST00000577228 MBD5Q9P267 1494 aa18.98■□□□□ 0.63
CDH8-202ENST00000577228 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
CDH8-202ENST00000577228 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
CDH8-202ENST00000577228 MYO3AQ8NEV4 1616 aa18.97■□□□□ 0.63
CDH8-202ENST00000577228 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
CDH8-202ENST00000577228 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
CDH8-202ENST00000577228 RTEL1-TNFRSF6BF6WH68 1400 aa18.95■□□□□ 0.62
CDH8-202ENST00000577228 NCKAP5LQ9HCH0 1330 aa18.95■□□□□ 0.62
CDH8-202ENST00000577228 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
CDH8-202ENST00000577228 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
CDH8-202ENST00000577228 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
CDH8-202ENST00000577228 DHX29Q7Z478 1369 aaKnown RBP18.92■□□□□ 0.62
CDH8-202ENST00000577228 PKD2Q13563 968 aa18.91■□□□□ 0.62
CDH8-202ENST00000577228 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
CDH8-202ENST00000577228 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
CDH8-202ENST00000577228 DISP3Q9P2K9 1392 aa18.9■□□□□ 0.62
CDH8-202ENST00000577228 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
CDH8-202ENST00000577228 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
CDH8-202ENST00000577228 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
CDH8-202ENST00000577228 A2ML1A8K2U0 1454 aa18.87■□□□□ 0.61
CDH8-202ENST00000577228 KIF3BO15066 747 aa18.87■□□□□ 0.61
CDH8-202ENST00000577228 RSPH4AQ5TD94 716 aa18.86■□□□□ 0.61
CDH8-202ENST00000577228 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms