RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 LMTK3Q96Q04 1460 aa32.83■■■□□ 2.85
SLC12A4-217ENST00000576462 MLECQ14165 292 aa32.83■■■□□ 2.85
SLC12A4-217ENST00000576462 CHIC1Q5VXU3 224 aa32.82■■■□□ 2.84
SLC12A4-217ENST00000576462 SIGLEC1Q9BZZ2 1709 aa32.81■■■□□ 2.84
SLC12A4-217ENST00000576462 MAGI2Q86UL8 1455 aa32.8■■■□□ 2.84
SLC12A4-217ENST00000576462 CDK11AQ9UQ88 783 aaPredicted RBP32.8■■■□□ 2.84
SLC12A4-217ENST00000576462 EFCAB2Q5VUJ9 269 aa32.77■■■□□ 2.84
SLC12A4-217ENST00000576462 FBXO41Q8TF61 875 aa32.76■■■□□ 2.83
SLC12A4-217ENST00000576462 MYO5CQ9NQX4 1742 aa32.74■■■□□ 2.83
SLC12A4-217ENST00000576462 HSPA2P54652 639 aa32.74■■■□□ 2.83
SLC12A4-217ENST00000576462 KIF14Q15058 1648 aa32.73■■■□□ 2.83
SLC12A4-217ENST00000576462 TROQ12816 1431 aaPredicted RBP32.69■■■□□ 2.82
SLC12A4-217ENST00000576462 ATP10AO60312 1499 aa32.67■■■□□ 2.82
SLC12A4-217ENST00000576462 CLIP1P30622 1438 aa32.66■■■□□ 2.82
SLC12A4-217ENST00000576462 ARHGAP5Q13017 1502 aa32.66■■■□□ 2.82
SLC12A4-217ENST00000576462 FER1L4A9Z1Z3 1794 aa32.65■■■□□ 2.82
SLC12A4-217ENST00000576462 C9orf84Q5VXU9 1444 aa32.64■■■□□ 2.82
SLC12A4-217ENST00000576462 AFAP1Q8N556 730 aa32.63■■■□□ 2.81
SLC12A4-217ENST00000576462 MYT1LQ9UL68 1186 aa32.63■■■□□ 2.81
SLC12A4-217ENST00000576462 LRRIQ1Q96JM4 1722 aa32.62■■■□□ 2.81
SLC12A4-217ENST00000576462 ZNF518AQ6AHZ1 1483 aa32.6■■■□□ 2.81
SLC12A4-217ENST00000576462 ARHGEF12Q9NZN5 1544 aa32.58■■■□□ 2.81
SLC12A4-217ENST00000576462 CEBPAP49715 358 aaPredicted RBP32.54■■■□□ 2.8
SLC12A4-217ENST00000576462 KDM5CP41229 1560 aa32.52■■■□□ 2.8
SLC12A4-217ENST00000576462 CASKIN1Q8WXD9 1431 aa32.5■■■□□ 2.79
SLC12A4-217ENST00000576462 CDC42BPBQ9Y5S2 1711 aa32.49■■■□□ 2.79
SLC12A4-217ENST00000576462 CCDC18Q5T9S5 1454 aa32.47■■■□□ 2.79
SLC12A4-217ENST00000576462 DIP2CQ9Y2E4 1556 aa32.46■■■□□ 2.79
SLC12A4-217ENST00000576462 PREX2Q70Z35 1606 aa32.44■■■□□ 2.78
SLC12A4-217ENST00000576462 TRAPPC8Q9Y2L5 1435 aa32.43■■■□□ 2.78
SLC12A4-217ENST00000576462 ABCA6Q8N139 1617 aa32.41■■■□□ 2.78
SLC12A4-217ENST00000576462 PREX1Q8TCU6 1659 aa32.41■■■□□ 2.78
SLC12A4-217ENST00000576462 MLH3Q9UHC1 1453 aa32.41■■■□□ 2.78
SLC12A4-217ENST00000576462 ABCC1P33527 1531 aa32.41■■■□□ 2.78
SLC12A4-217ENST00000576462 CERKQ8TCT0 537 aa32.37■■■□□ 2.77
SLC12A4-217ENST00000576462 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
SLC12A4-217ENST00000576462 REREQ9P2R6 1566 aa32.36■■■□□ 2.77
SLC12A4-217ENST00000576462 ZNF777Q9ULD5 760 aaPredicted RBP32.35■■■□□ 2.77
SLC12A4-217ENST00000576462 FYCO1Q9BQS8 1478 aa32.34■■■□□ 2.77
SLC12A4-217ENST00000576462 ESF1Q9H501 851 aaKnown RBP32.33■■■□□ 2.77
SLC12A4-217ENST00000576462 CDC42BPAQ5VT25 1732 aa32.32■■■□□ 2.76
SLC12A4-217ENST00000576462 UHRF1BP1Q6BDS2 1440 aa32.32■■■□□ 2.76
SLC12A4-217ENST00000576462 AGLP35573 1532 aa32.28■■■□□ 2.76
SLC12A4-217ENST00000576462 KIDINS220Q9ULH0 1771 aa32.27■■■□□ 2.76
SLC12A4-217ENST00000576462 C3P01024 1663 aa32.25■■■□□ 2.75
SLC12A4-217ENST00000576462 DMRT2Q9Y5R5 561 aa32.23■■■□□ 2.75
SLC12A4-217ENST00000576462 SAMD9LQ8IVG5 1584 aa32.23■■■□□ 2.75
SLC12A4-217ENST00000576462 STRCQ7RTU9 1775 aa32.22■■■□□ 2.75
SLC12A4-217ENST00000576462 GPATCH8Q9UKJ3 1502 aaKnown RBP32.22■■■□□ 2.75
SLC12A4-217ENST00000576462 HNRNPMP52272 730 aaKnown RBP eCLIP32.22■■■□□ 2.75
SLC12A4-217ENST00000576462 SYCP2Q9BX26 1530 aa32.21■■■□□ 2.75
SLC12A4-217ENST00000576462 SETD1BQ9UPS6 1966 aaKnown RBP32.2■■■□□ 2.75
SLC12A4-217ENST00000576462 SPAG9O60271 1321 aaKnown RBP32.19■■■□□ 2.74
SLC12A4-217ENST00000576462 CFDP1Q9UEE9 299 aaPredicted RBP32.16■■■□□ 2.74
SLC12A4-217ENST00000576462 CNTLNQ9NXG0 1405 aa32.15■■■□□ 2.74
SLC12A4-217ENST00000576462 CCNB3Q8WWL7 1395 aa32.13■■■□□ 2.73
SLC12A4-217ENST00000576462 MTUS2Q5JR59 1369 aa32.11■■■□□ 2.73
SLC12A4-217ENST00000576462 SUPT6HQ7KZ85 1726 aaKnown RBP32.09■■■□□ 2.73
SLC12A4-217ENST00000576462 ATP7AQ04656 1500 aa32.08■■■□□ 2.73
SLC12A4-217ENST00000576462 KIAA1107Q9UPP5 1409 aa32.08■■■□□ 2.73
SLC12A4-217ENST00000576462 PLEKHH2Q8IVE3 1493 aa32.07■■■□□ 2.72
SLC12A4-217ENST00000576462 PTPRTO14522 1441 aa32.05■■■□□ 2.72
SLC12A4-217ENST00000576462 ZMYM3Q14202 1370 aa32.05■■■□□ 2.72
SLC12A4-217ENST00000576462 A2MP01023 1474 aa32.03■■■□□ 2.72
SLC12A4-217ENST00000576462 INO80Q9ULG1 1556 aaPredicted RBP32.02■■■□□ 2.72
SLC12A4-217ENST00000576462 MROH2AA6NES4 1674 aa32.01■■■□□ 2.71
SLC12A4-217ENST00000576462 ZNF644Q9H582 1327 aaPredicted RBP32■■■□□ 2.71
SLC12A4-217ENST00000576462 GGT6Q6P531 493 aa32■■■□□ 2.71
SLC12A4-217ENST00000576462 NPATQ14207 1427 aa32■■■□□ 2.71
SLC12A4-217ENST00000576462 NCOA1Q15788 1441 aa32■■■□□ 2.71
SLC12A4-217ENST00000576462 CLTCQ00610 1675 aaKnown RBP31.98■■■□□ 2.71
SLC12A4-217ENST00000576462 PLXNC1O60486 1568 aa31.98■■■□□ 2.71
SLC12A4-217ENST00000576462 TIAM1Q13009 1591 aa31.95■■■□□ 2.71
SLC12A4-217ENST00000576462 CAMSAP1Q5T5Y3 1602 aa31.95■■■□□ 2.71
SLC12A4-217ENST00000576462 EHBP1L1Q8N3D4 1523 aa31.93■■■□□ 2.7
SLC12A4-217ENST00000576462 NCKAP5LQ9HCH0 1330 aa31.91■■■□□ 2.7
SLC12A4-217ENST00000576462 LTBP4Q8N2S1 1624 aa31.89■■■□□ 2.7
SLC12A4-217ENST00000576462 MBD5Q9P267 1494 aa31.88■■■□□ 2.69
SLC12A4-217ENST00000576462 ADGBQ8N7X0 1667 aa31.87■■■□□ 2.69
SLC12A4-217ENST00000576462 PTPRKQ15262 1439 aa31.87■■■□□ 2.69
SLC12A4-217ENST00000576462 CEP162Q5TB80 1403 aa31.87■■■□□ 2.69
SLC12A4-217ENST00000576462 MYO3AQ8NEV4 1616 aa31.85■■■□□ 2.69
SLC12A4-217ENST00000576462 PPP6R1Q9UPN7 881 aa31.81■■■□□ 2.68
SLC12A4-217ENST00000576462 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
SLC12A4-217ENST00000576462 RTEL1-TNFRSF6BF6WH68 1400 aa31.8■■■□□ 2.68
SLC12A4-217ENST00000576462 CEP170BQ9Y4F5 1589 aaPredicted RBP31.8■■■□□ 2.68
SLC12A4-217ENST00000576462 ZNF142P52746 1687 aaPredicted RBP31.79■■■□□ 2.68
SLC12A4-217ENST00000576462 DHX29Q7Z478 1369 aaKnown RBP31.78■■■□□ 2.68
SLC12A4-217ENST00000576462 ZNF335Q9H4Z2 1342 aaPredicted RBP31.77■■■□□ 2.68
SLC12A4-217ENST00000576462 NCOA2Q15596 1464 aa31.77■■■□□ 2.68
SLC12A4-217ENST00000576462 KIF3BO15066 747 aa31.75■■■□□ 2.67
SLC12A4-217ENST00000576462 PKD2Q13563 968 aa31.75■■■□□ 2.67
SLC12A4-217ENST00000576462 PLA2R1Q13018 1463 aa31.75■■■□□ 2.67
SLC12A4-217ENST00000576462 IQSEC2Q5JU85 1478 aa31.74■■■□□ 2.67
SLC12A4-217ENST00000576462 CAMSAP2Q08AD1 1489 aa31.73■■■□□ 2.67
SLC12A4-217ENST00000576462 CCDC141Q6ZP82 1450 aa31.73■■■□□ 2.67
SLC12A4-217ENST00000576462 TCOF1Q13428 1488 aaKnown RBP31.71■■■□□ 2.67
SLC12A4-217ENST00000576462 FBXO31Q5XUX0 539 aaPredicted RBP31.69■■■□□ 2.66
SLC12A4-217ENST00000576462 ILDR2Q71H61 639 aa31.68■■■□□ 2.66
SLC12A4-217ENST00000576462 A2ML1A8K2U0 1454 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms