RNA–Protein interactions for RNA: ENST00000574450.1

LCMT1-209, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-209ENST00000574450 PREX2Q70Z35 1606 aa22.56■■□□□ 1.2
LCMT1-209ENST00000574450 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
LCMT1-209ENST00000574450 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
LCMT1-209ENST00000574450 CDC42BPBQ9Y5S2 1711 aa22.54■■□□□ 1.2
LCMT1-209ENST00000574450 ARHGAP5Q13017 1502 aa22.53■■□□□ 1.2
LCMT1-209ENST00000574450 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
LCMT1-209ENST00000574450 KDM6BO15054 1643 aa22.52■■□□□ 1.2
LCMT1-209ENST00000574450 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
LCMT1-209ENST00000574450 COL17A1Q9UMD9 1497 aaPredicted RBP22.47■■□□□ 1.19
LCMT1-209ENST00000574450 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
LCMT1-209ENST00000574450 PLEKHH2Q8IVE3 1493 aa22.46■■□□□ 1.19
LCMT1-209ENST00000574450 MYOM3Q5VTT5 1437 aa22.45■■□□□ 1.18
LCMT1-209ENST00000574450 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
LCMT1-209ENST00000574450 SCAPERQ9BY12 1400 aa22.45■■□□□ 1.18
LCMT1-209ENST00000574450 DENND4BO75064 1496 aaPredicted RBP22.45■■□□□ 1.18
LCMT1-209ENST00000574450 KIAA1107Q9UPP5 1409 aa22.43■■□□□ 1.18
LCMT1-209ENST00000574450 ZNF777Q9ULD5 760 aaPredicted RBP22.42■■□□□ 1.18
LCMT1-209ENST00000574450 RAPGEF3O95398 923 aa22.39■■□□□ 1.17
LCMT1-209ENST00000574450 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.17
LCMT1-209ENST00000574450 ABCC1P33527 1531 aa22.39■■□□□ 1.17
LCMT1-209ENST00000574450 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
LCMT1-209ENST00000574450 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
LCMT1-209ENST00000574450 ZNF518AQ6AHZ1 1483 aa22.37■■□□□ 1.17
LCMT1-209ENST00000574450 RICTORQ6R327 1708 aa22.36■■□□□ 1.17
LCMT1-209ENST00000574450 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
LCMT1-209ENST00000574450 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
LCMT1-209ENST00000574450 ARHGEF12Q9NZN5 1544 aa22.34■■□□□ 1.17
LCMT1-209ENST00000574450 FGD6Q6ZV73 1430 aa22.33■■□□□ 1.17
LCMT1-209ENST00000574450 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
LCMT1-209ENST00000574450 CAMSAP2Q08AD1 1489 aa22.33■■□□□ 1.16
LCMT1-209ENST00000574450 FRMPD1Q5SYB0 1578 aa22.33■■□□□ 1.16
LCMT1-209ENST00000574450 ZMYM4Q5VZL5 1548 aa22.32■■□□□ 1.16
LCMT1-209ENST00000574450 AFAP1Q8N556 730 aa22.32■■□□□ 1.16
LCMT1-209ENST00000574450 MBD5Q9P267 1494 aa22.31■■□□□ 1.16
LCMT1-209ENST00000574450 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
LCMT1-209ENST00000574450 KDM5CP41229 1560 aa22.3■■□□□ 1.16
LCMT1-209ENST00000574450 TRAPPC8Q9Y2L5 1435 aa22.3■■□□□ 1.16
LCMT1-209ENST00000574450 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
LCMT1-209ENST00000574450 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
LCMT1-209ENST00000574450 MLH3Q9UHC1 1453 aa22.28■■□□□ 1.16
LCMT1-209ENST00000574450 ARHGEF5Q12774 1597 aa22.27■■□□□ 1.16
LCMT1-209ENST00000574450 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
LCMT1-209ENST00000574450 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
LCMT1-209ENST00000574450 SPAG9O60271 1321 aaKnown RBP22.24■■□□□ 1.15
LCMT1-209ENST00000574450 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
LCMT1-209ENST00000574450 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
LCMT1-209ENST00000574450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.15
LCMT1-209ENST00000574450 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
LCMT1-209ENST00000574450 HECW2Q9P2P5 1572 aa22.22■■□□□ 1.15
LCMT1-209ENST00000574450 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
LCMT1-209ENST00000574450 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
LCMT1-209ENST00000574450 ARHGEF40Q8TER5 1519 aa22.19■■□□□ 1.14
LCMT1-209ENST00000574450 ATP10AO60312 1499 aa22.17■■□□□ 1.14
LCMT1-209ENST00000574450 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
LCMT1-209ENST00000574450 FAM50AQ14320 339 aaKnown RBP22.17■■□□□ 1.14
LCMT1-209ENST00000574450 YEATS2Q9ULM3 1422 aa22.16■■□□□ 1.14
LCMT1-209ENST00000574450 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
LCMT1-209ENST00000574450 ATP7AQ04656 1500 aa22.16■■□□□ 1.14
LCMT1-209ENST00000574450 INO80Q9ULG1 1556 aaPredicted RBP22.15■■□□□ 1.14
LCMT1-209ENST00000574450 DNMT1P26358 1616 aaKnown RBP22.14■■□□□ 1.14
LCMT1-209ENST00000574450 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
LCMT1-209ENST00000574450 SHANK2Q9UPX8 1470 aa22.14■■□□□ 1.13
LCMT1-209ENST00000574450 ABCC5O15440 1437 aa22.14■■□□□ 1.13
LCMT1-209ENST00000574450 DAPK1P53355 1430 aa22.14■■□□□ 1.13
LCMT1-209ENST00000574450 C9orf84Q5VXU9 1444 aa22.12■■□□□ 1.13
LCMT1-209ENST00000574450 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
LCMT1-209ENST00000574450 DIP2CQ9Y2E4 1556 aa22.11■■□□□ 1.13
LCMT1-209ENST00000574450 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
LCMT1-209ENST00000574450 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.13
LCMT1-209ENST00000574450 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
LCMT1-209ENST00000574450 DHX29Q7Z478 1369 aaKnown RBP22.05■■□□□ 1.12
LCMT1-209ENST00000574450 AGLP35573 1532 aa22.05■■□□□ 1.12
LCMT1-209ENST00000574450 A2MP01023 1474 aa22.04■■□□□ 1.12
LCMT1-209ENST00000574450 ANKRD30AQ9BXX3 1397 aa22.04■■□□□ 1.12
LCMT1-209ENST00000574450 ARID4BQ4LE39 1312 aaPredicted RBP22.04■■□□□ 1.12
LCMT1-209ENST00000574450 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
LCMT1-209ENST00000574450 ADGRL2O95490 1459 aa22.02■■□□□ 1.12
LCMT1-209ENST00000574450 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
LCMT1-209ENST00000574450 ROCK1Q13464 1354 aa22■■□□□ 1.11
LCMT1-209ENST00000574450 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
LCMT1-209ENST00000574450 DUOX2Q9NRD8 1548 aa21.98■■□□□ 1.11
LCMT1-209ENST00000574450 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
LCMT1-209ENST00000574450 PTPRKQ15262 1439 aa21.97■■□□□ 1.11
LCMT1-209ENST00000574450 RRP7BPQ9NSQ0 103 aa21.96■■□□□ 1.11
LCMT1-209ENST00000574450 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
LCMT1-209ENST00000574450 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
LCMT1-209ENST00000574450 SIGLEC1Q9BZZ2 1709 aa21.94■■□□□ 1.1
LCMT1-209ENST00000574450 ITGAEP38570 1179 aa21.94■■□□□ 1.1
LCMT1-209ENST00000574450 ERBINQ96RT1 1412 aa21.93■■□□□ 1.1
LCMT1-209ENST00000574450 KDM4FA0A1W2PPD8 638 aa21.91■■□□□ 1.1
LCMT1-209ENST00000574450 KIF3BO15066 747 aa21.91■■□□□ 1.1
LCMT1-209ENST00000574450 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
LCMT1-209ENST00000574450 ADAMTSL3P82987 1691 aa21.9■■□□□ 1.1
LCMT1-209ENST00000574450 MLECQ14165 292 aa21.88■■□□□ 1.09
LCMT1-209ENST00000574450 ANKRD50Q9ULJ7 1429 aa21.87■■□□□ 1.09
LCMT1-209ENST00000574450 GGT6Q6P531 493 aa21.86■■□□□ 1.09
LCMT1-209ENST00000574450 ESF1Q9H501 851 aaKnown RBP21.85■■□□□ 1.09
LCMT1-209ENST00000574450 FAM135AQ9P2D6 1515 aa21.85■■□□□ 1.09
LCMT1-209ENST00000574450 CNTLNQ9NXG0 1405 aa21.84■■□□□ 1.09
LCMT1-209ENST00000574450 RNF17Q9BXT8 1623 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms