RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 ABCC5O15440 1437 aa19■□□□□ 0.63
PRPF8-207ENST00000573681 DAPK1P53355 1430 aa19■□□□□ 0.63
PRPF8-207ENST00000573681 AKNAQ7Z591 1439 aa19■□□□□ 0.63
PRPF8-207ENST00000573681 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
PRPF8-207ENST00000573681 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
PRPF8-207ENST00000573681 NAIPQ13075 1403 aa18.97■□□□□ 0.63
PRPF8-207ENST00000573681 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
PRPF8-207ENST00000573681 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
PRPF8-207ENST00000573681 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
PRPF8-207ENST00000573681 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
PRPF8-207ENST00000573681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
PRPF8-207ENST00000573681 PLCH2O75038 1416 aa18.94■□□□□ 0.62
PRPF8-207ENST00000573681 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
PRPF8-207ENST00000573681 DNMT1P26358 1616 aaKnown RBP18.92■□□□□ 0.62
PRPF8-207ENST00000573681 CDC42BPAQ5VT25 1732 aa18.91■□□□□ 0.62
PRPF8-207ENST00000573681 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.62
PRPF8-207ENST00000573681 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
PRPF8-207ENST00000573681 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
PRPF8-207ENST00000573681 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
PRPF8-207ENST00000573681 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
PRPF8-207ENST00000573681 ANKRD30AQ9BXX3 1397 aa18.89■□□□□ 0.61
PRPF8-207ENST00000573681 ARHGAP5Q13017 1502 aa18.88■□□□□ 0.61
PRPF8-207ENST00000573681 NCOA1Q15788 1441 aa18.87■□□□□ 0.61
PRPF8-207ENST00000573681 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
PRPF8-207ENST00000573681 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
PRPF8-207ENST00000573681 TTC37Q6PGP7 1564 aa18.85■□□□□ 0.61
PRPF8-207ENST00000573681 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
PRPF8-207ENST00000573681 ADGRL2O95490 1459 aa18.85■□□□□ 0.61
PRPF8-207ENST00000573681 SHANK2Q9UPX8 1470 aa18.85■□□□□ 0.61
PRPF8-207ENST00000573681 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
PRPF8-207ENST00000573681 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.6
PRPF8-207ENST00000573681 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
PRPF8-207ENST00000573681 CCDC141Q6ZP82 1450 aa18.82■□□□□ 0.6
PRPF8-207ENST00000573681 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
PRPF8-207ENST00000573681 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
PRPF8-207ENST00000573681 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
PRPF8-207ENST00000573681 TIMELESSQ9UNS1 1208 aa18.8■□□□□ 0.6
PRPF8-207ENST00000573681 RIMBP3CA6NJZ7 1639 aa18.79■□□□□ 0.6
PRPF8-207ENST00000573681 RIMBP3BA6NNM3 1639 aa18.79■□□□□ 0.6
PRPF8-207ENST00000573681 RIMBP3Q9UFD9 1639 aa18.79■□□□□ 0.6
PRPF8-207ENST00000573681 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
PRPF8-207ENST00000573681 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
PRPF8-207ENST00000573681 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
PRPF8-207ENST00000573681 MAPKBP1O60336 1514 aa18.74■□□□□ 0.59
PRPF8-207ENST00000573681 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
PRPF8-207ENST00000573681 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
PRPF8-207ENST00000573681 CROCC2H7BZ55 1655 aa18.73■□□□□ 0.59
PRPF8-207ENST00000573681 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
PRPF8-207ENST00000573681 FANCAO15360 1455 aa18.73■□□□□ 0.59
PRPF8-207ENST00000573681 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
PRPF8-207ENST00000573681 MAST1Q9Y2H9 1570 aa18.72■□□□□ 0.59
PRPF8-207ENST00000573681 KIF15Q9NS87 1388 aa18.71■□□□□ 0.59
PRPF8-207ENST00000573681 ARHGEF12Q9NZN5 1544 aa18.71■□□□□ 0.59
PRPF8-207ENST00000573681 ABCC1P33527 1531 aa18.69■□□□□ 0.58
PRPF8-207ENST00000573681 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
PRPF8-207ENST00000573681 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
PRPF8-207ENST00000573681 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
PRPF8-207ENST00000573681 KDM6BO15054 1643 aa18.68■□□□□ 0.58
PRPF8-207ENST00000573681 NEUROD1Q13562 356 aa18.68■□□□□ 0.58
PRPF8-207ENST00000573681 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
PRPF8-207ENST00000573681 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
PRPF8-207ENST00000573681 AFAP1Q8N556 730 aa18.67■□□□□ 0.58
PRPF8-207ENST00000573681 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
PRPF8-207ENST00000573681 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
PRPF8-207ENST00000573681 NUP155O75694 1391 aa18.62■□□□□ 0.57
PRPF8-207ENST00000573681 GLI2P10070 1586 aa18.62■□□□□ 0.57
PRPF8-207ENST00000573681 NEO1Q92859 1461 aa18.61■□□□□ 0.57
PRPF8-207ENST00000573681 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
PRPF8-207ENST00000573681 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
PRPF8-207ENST00000573681 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
PRPF8-207ENST00000573681 CFAP74Q9C0B2 1584 aa18.59■□□□□ 0.57
PRPF8-207ENST00000573681 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
PRPF8-207ENST00000573681 PZPP20742 1482 aa18.58■□□□□ 0.56
PRPF8-207ENST00000573681 ERBINQ96RT1 1412 aa18.57■□□□□ 0.56
PRPF8-207ENST00000573681 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
PRPF8-207ENST00000573681 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
PRPF8-207ENST00000573681 PKD2Q13563 968 aa18.57■□□□□ 0.56
PRPF8-207ENST00000573681 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
PRPF8-207ENST00000573681 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
PRPF8-207ENST00000573681 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
PRPF8-207ENST00000573681 ZNF518AQ6AHZ1 1483 aa18.55■□□□□ 0.56
PRPF8-207ENST00000573681 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
PRPF8-207ENST00000573681 FOXD1Q16676 465 aa18.53■□□□□ 0.56
PRPF8-207ENST00000573681 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
PRPF8-207ENST00000573681 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
PRPF8-207ENST00000573681 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
PRPF8-207ENST00000573681 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
PRPF8-207ENST00000573681 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
PRPF8-207ENST00000573681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■□□□□ 9.1
PRPF8-207ENST00000573681 MLH3Q9UHC1 1453 aa18.5■□□□□ 0.55
PRPF8-207ENST00000573681 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
PRPF8-207ENST00000573681 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
PRPF8-207ENST00000573681 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
PRPF8-207ENST00000573681 RPRD2Q5VT52 1461 aaKnown RBP18.46■□□□□ 0.54
PRPF8-207ENST00000573681 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
PRPF8-207ENST00000573681 UNC13BO14795 1591 aa18.45■□□□□ 0.54
PRPF8-207ENST00000573681 KDM5CP41229 1560 aa18.44■□□□□ 0.54
PRPF8-207ENST00000573681 KIF3BO15066 747 aa18.44■□□□□ 0.54
PRPF8-207ENST00000573681 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
PRPF8-207ENST00000573681 KANK1Q14678 1352 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms