RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
TVP23A-207ENST00000573360 KIF14Q15058 1648 aa20.09■□□□□ 0.81
TVP23A-207ENST00000573360 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.81
TVP23A-207ENST00000573360 ZNF326Q5BKZ1 582 aaKnown RBP20.06■□□□□ 0.8
TVP23A-207ENST00000573360 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
TVP23A-207ENST00000573360 ABCA8O94911 1581 aa20.04■□□□□ 0.8
TVP23A-207ENST00000573360 AFAP1Q8N556 730 aa20.04■□□□□ 0.8
TVP23A-207ENST00000573360 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.8
TVP23A-207ENST00000573360 NAIPQ13075 1403 aa20.01■□□□□ 0.79
TVP23A-207ENST00000573360 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
TVP23A-207ENST00000573360 ABCC5O15440 1437 aa20■□□□□ 0.79
TVP23A-207ENST00000573360 MIA2Q96PC5 1412 aa20■□□□□ 0.79
TVP23A-207ENST00000573360 DAPK1P53355 1430 aa19.99■□□□□ 0.79
TVP23A-207ENST00000573360 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
TVP23A-207ENST00000573360 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
TVP23A-207ENST00000573360 ARHGAP5Q13017 1502 aa19.98■□□□□ 0.79
TVP23A-207ENST00000573360 ABCC2Q92887 1545 aa19.96■□□□□ 0.79
TVP23A-207ENST00000573360 TONSLQ96HA7 1378 aa19.96■□□□□ 0.79
TVP23A-207ENST00000573360 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
TVP23A-207ENST00000573360 MIER1Q8N108 512 aa19.95■□□□□ 0.78
TVP23A-207ENST00000573360 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.94■□□□□ 0.78
TVP23A-207ENST00000573360 ANKRD30AQ9BXX3 1397 aa19.93■□□□□ 0.78
TVP23A-207ENST00000573360 PKD2Q13563 968 aa19.93■□□□□ 0.78
TVP23A-207ENST00000573360 NUP155O75694 1391 aa19.9■□□□□ 0.78
TVP23A-207ENST00000573360 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
TVP23A-207ENST00000573360 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
TVP23A-207ENST00000573360 ASXL2Q76L83 1435 aa19.88■□□□□ 0.77
TVP23A-207ENST00000573360 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
TVP23A-207ENST00000573360 FAM69CQ0P6D2 419 aa19.88■□□□□ 0.77
TVP23A-207ENST00000573360 RGL3Q3MIN7 710 aa19.87■□□□□ 0.77
TVP23A-207ENST00000573360 SPAG9O60271 1321 aaKnown RBP19.87■□□□□ 0.77
TVP23A-207ENST00000573360 C9orf84Q5VXU9 1444 aa19.87■□□□□ 0.77
TVP23A-207ENST00000573360 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
TVP23A-207ENST00000573360 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
TVP23A-207ENST00000573360 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
TVP23A-207ENST00000573360 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
TVP23A-207ENST00000573360 TCOF1Q13428 1488 aaKnown RBP19.85■□□□□ 0.77
TVP23A-207ENST00000573360 ABCC10Q5T3U5 1492 aa19.85■□□□□ 0.77
TVP23A-207ENST00000573360 RAPGEF3O95398 923 aa19.85■□□□□ 0.77
TVP23A-207ENST00000573360 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
TVP23A-207ENST00000573360 NCOA1Q15788 1441 aa19.83■□□□□ 0.77
TVP23A-207ENST00000573360 KDM6BO15054 1643 aa19.82■□□□□ 0.76
TVP23A-207ENST00000573360 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
TVP23A-207ENST00000573360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.81■□□□□ 0.76
TVP23A-207ENST00000573360 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
TVP23A-207ENST00000573360 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
TVP23A-207ENST00000573360 KIF3BO15066 747 aa19.8■□□□□ 0.76
TVP23A-207ENST00000573360 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
TVP23A-207ENST00000573360 SYCP2Q9BX26 1530 aa19.79■□□□□ 0.76
TVP23A-207ENST00000573360 GGT6Q6P531 493 aa19.79■□□□□ 0.76
TVP23A-207ENST00000573360 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
TVP23A-207ENST00000573360 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
TVP23A-207ENST00000573360 WDR7Q9Y4E6 1490 aa19.78■□□□□ 0.76
TVP23A-207ENST00000573360 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
TVP23A-207ENST00000573360 ADCY10Q96PN6 1610 aa19.77■□□□□ 0.76
TVP23A-207ENST00000573360 TRAPPC8Q9Y2L5 1435 aa19.77■□□□□ 0.76
TVP23A-207ENST00000573360 TRHP20396 242 aaPredicted RBP19.76■□□□□ 0.75
TVP23A-207ENST00000573360 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
TVP23A-207ENST00000573360 PLPPR3Q6T4P5 718 aa19.75■□□□□ 0.75
TVP23A-207ENST00000573360 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
TVP23A-207ENST00000573360 PLCH2O75038 1416 aa19.75■□□□□ 0.75
TVP23A-207ENST00000573360 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
TVP23A-207ENST00000573360 CD109Q6YHK3 1445 aa19.73■□□□□ 0.75
TVP23A-207ENST00000573360 CCDC141Q6ZP82 1450 aa19.73■□□□□ 0.75
TVP23A-207ENST00000573360 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
TVP23A-207ENST00000573360 CDC42BPAQ5VT25 1732 aa19.72■□□□□ 0.75
TVP23A-207ENST00000573360 FANCAO15360 1455 aa19.72■□□□□ 0.75
TVP23A-207ENST00000573360 ROCK1Q13464 1354 aa19.72■□□□□ 0.75
TVP23A-207ENST00000573360 MLECQ14165 292 aa19.72■□□□□ 0.75
TVP23A-207ENST00000573360 ITSN2Q9NZM3 1697 aa19.72■□□□□ 0.75
TVP23A-207ENST00000573360 UHRF1BP1LA0JNW5 1464 aa19.71■□□□□ 0.75
TVP23A-207ENST00000573360 DNMT1P26358 1616 aaKnown RBP19.71■□□□□ 0.75
TVP23A-207ENST00000573360 MBD5Q9P267 1494 aa19.69■□□□□ 0.74
TVP23A-207ENST00000573360 SAMD9LQ8IVG5 1584 aa19.68■□□□□ 0.74
TVP23A-207ENST00000573360 ARHGEF12Q9NZN5 1544 aa19.68■□□□□ 0.74
TVP23A-207ENST00000573360 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
TVP23A-207ENST00000573360 PLEKHH2Q8IVE3 1493 aa19.67■□□□□ 0.74
TVP23A-207ENST00000573360 ADGRL1O94910 1474 aa19.66■□□□□ 0.74
TVP23A-207ENST00000573360 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
TVP23A-207ENST00000573360 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
TVP23A-207ENST00000573360 PREX2Q70Z35 1606 aa19.58■□□□□ 0.73
TVP23A-207ENST00000573360 ANKRD30BQ9BXX2 1392 aa19.58■□□□□ 0.72
TVP23A-207ENST00000573360 MYO5CQ9NQX4 1742 aa19.57■□□□□ 0.72
TVP23A-207ENST00000573360 DENND4BO75064 1496 aaPredicted RBP19.56■□□□□ 0.72
TVP23A-207ENST00000573360 ARID4BQ4LE39 1312 aaPredicted RBP19.55■□□□□ 0.72
TVP23A-207ENST00000573360 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
TVP23A-207ENST00000573360 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
TVP23A-207ENST00000573360 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
TVP23A-207ENST00000573360 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
TVP23A-207ENST00000573360 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
TVP23A-207ENST00000573360 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
TVP23A-207ENST00000573360 PZPP20742 1482 aa19.54■□□□□ 0.72
TVP23A-207ENST00000573360 TIMELESSQ9UNS1 1208 aa19.53■□□□□ 0.72
TVP23A-207ENST00000573360 WASHC2CQ9Y4E1 1318 aa19.52■□□□□ 0.72
TVP23A-207ENST00000573360 EIF4G2P78344 907 aaKnown RBP eCLIP19.52■□□□□ 0.72
TVP23A-207ENST00000573360 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
TVP23A-207ENST00000573360 GCC2Q8IWJ2 1684 aa19.5■□□□□ 0.71
TVP23A-207ENST00000573360 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
TVP23A-207ENST00000573360 KANK1Q14678 1352 aa19.47■□□□□ 0.71
TVP23A-207ENST00000573360 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms