RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 POTEMA6NI47 508 aa12.48□□□□□ -0.41
NUP88-205ENST00000572809 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
NUP88-205ENST00000572809 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
NUP88-205ENST00000572809 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
NUP88-205ENST00000572809 PRXQ9BXM0 1461 aa12.45□□□□□ -0.42
NUP88-205ENST00000572809 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
NUP88-205ENST00000572809 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
NUP88-205ENST00000572809 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
NUP88-205ENST00000572809 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
NUP88-205ENST00000572809 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
NUP88-205ENST00000572809 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
NUP88-205ENST00000572809 ATMINO43313 823 aaPredicted RBP12.41□□□□□ -0.42
NUP88-205ENST00000572809 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
NUP88-205ENST00000572809 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
NUP88-205ENST00000572809 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
NUP88-205ENST00000572809 EEA1Q15075 1411 aa12.38□□□□□ -0.43
NUP88-205ENST00000572809 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
NUP88-205ENST00000572809 ABCC10Q5T3U5 1492 aa12.38□□□□□ -0.43
NUP88-205ENST00000572809 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
NUP88-205ENST00000572809 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
NUP88-205ENST00000572809 C7P10643 843 aa12.37□□□□□ -0.43
NUP88-205ENST00000572809 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
NUP88-205ENST00000572809 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
NUP88-205ENST00000572809 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
NUP88-205ENST00000572809 UHRF1BP1LA0JNW5 1464 aa12.36□□□□□ -0.43
NUP88-205ENST00000572809 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
NUP88-205ENST00000572809 ABCC2Q92887 1545 aa12.36□□□□□ -0.43
NUP88-205ENST00000572809 KIAA0556O60303 1618 aa12.35□□□□□ -0.43
NUP88-205ENST00000572809 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
NUP88-205ENST00000572809 P3H3Q8IVL6 736 aa12.33□□□□□ -0.44
NUP88-205ENST00000572809 ASXL2Q76L83 1435 aa12.31□□□□□ -0.44
NUP88-205ENST00000572809 PLB1Q6P1J6 1458 aa12.31□□□□□ -0.44
NUP88-205ENST00000572809 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
NUP88-205ENST00000572809 RANGAP1P46060 587 aaPredicted RBP12.3□□□□□ -0.44
NUP88-205ENST00000572809 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
NUP88-205ENST00000572809 KDM5BQ9UGL1 1544 aa12.3□□□□□ -0.44
NUP88-205ENST00000572809 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
NUP88-205ENST00000572809 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
NUP88-205ENST00000572809 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
NUP88-205ENST00000572809 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
NUP88-205ENST00000572809 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
NUP88-205ENST00000572809 ABCA8O94911 1581 aa12.25□□□□□ -0.45
NUP88-205ENST00000572809 ZCCHC11Q5TAX3 1644 aaKnown RBP12.25□□□□□ -0.45
NUP88-205ENST00000572809 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
NUP88-205ENST00000572809 FAM163AQ96GL9 167 aaPredicted RBP12.24□□□□□ -0.45
NUP88-205ENST00000572809 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
NUP88-205ENST00000572809 TSPOAP1O95153 1857 aa12.23□□□□□ -0.45
NUP88-205ENST00000572809 KIF21BO75037 1637 aa12.23□□□□□ -0.45
NUP88-205ENST00000572809 GLI2P10070 1586 aa12.23□□□□□ -0.45
NUP88-205ENST00000572809 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
NUP88-205ENST00000572809 EPRSP07814 1512 aaKnown RBP12.22□□□□□ -0.45
NUP88-205ENST00000572809 ARID3CA6NKF2 412 aa12.22□□□□□ -0.45
NUP88-205ENST00000572809 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
NUP88-205ENST00000572809 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
NUP88-205ENST00000572809 PROM2Q8N271 834 aa12.21□□□□□ -0.45
NUP88-205ENST00000572809 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
NUP88-205ENST00000572809 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
NUP88-205ENST00000572809 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
NUP88-205ENST00000572809 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
NUP88-205ENST00000572809 ATP10BO94823 1461 aa12.19□□□□□ -0.46
NUP88-205ENST00000572809 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
NUP88-205ENST00000572809 MAP3K13O43283 966 aa12.17□□□□□ -0.46
NUP88-205ENST00000572809 KDM6BO15054 1643 aa12.17□□□□□ -0.46
NUP88-205ENST00000572809 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.46
NUP88-205ENST00000572809 CD109Q6YHK3 1445 aa12.15□□□□□ -0.46
NUP88-205ENST00000572809 RAPGEF6Q8TEU7 1601 aa12.15□□□□□ -0.47
NUP88-205ENST00000572809 PPRC1Q5VV67 1664 aaKnown RBP12.14□□□□□ -0.47
NUP88-205ENST00000572809 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
NUP88-205ENST00000572809 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
NUP88-205ENST00000572809 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
NUP88-205ENST00000572809 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
NUP88-205ENST00000572809 TIE1P35590 1138 aa12.12□□□□□ -0.47
NUP88-205ENST00000572809 MIER1Q8N108 512 aa12.12□□□□□ -0.47
NUP88-205ENST00000572809 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
NUP88-205ENST00000572809 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
NUP88-205ENST00000572809 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
NUP88-205ENST00000572809 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
NUP88-205ENST00000572809 MAGI3Q5TCQ9 1506 aa12.1□□□□□ -0.47
NUP88-205ENST00000572809 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
NUP88-205ENST00000572809 FBXO3Q9UK99 471 aa12.09□□□□□ -0.47
NUP88-205ENST00000572809 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
NUP88-205ENST00000572809 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
NUP88-205ENST00000572809 SEC24BO95487 1268 aa12.07□□□□□ -0.48
NUP88-205ENST00000572809 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
NUP88-205ENST00000572809 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
NUP88-205ENST00000572809 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
NUP88-205ENST00000572809 CDK11AQ9UQ88 783 aaPredicted RBP12.04□□□□□ -0.48
NUP88-205ENST00000572809 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
NUP88-205ENST00000572809 ABCA9Q8IUA7 1624 aa12.04□□□□□ -0.48
NUP88-205ENST00000572809 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
NUP88-205ENST00000572809 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
NUP88-205ENST00000572809 TRIM35Q9UPQ4 493 aa12□□□□□ -0.49
NUP88-205ENST00000572809 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
NUP88-205ENST00000572809 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
NUP88-205ENST00000572809 HECW1Q76N89 1606 aa11.99□□□□□ -0.49
NUP88-205ENST00000572809 NEO1Q92859 1461 aa11.98□□□□□ -0.49
NUP88-205ENST00000572809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.49
NUP88-205ENST00000572809 CLIP1P30622 1438 aa11.97□□□□□ -0.49
NUP88-205ENST00000572809 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
NUP88-205ENST00000572809 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms