RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
TVP23A-205ENST00000572428 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
TVP23A-205ENST00000572428 PTPRGP23470 1445 aa13.03□□□□□ -0.32
TVP23A-205ENST00000572428 ADCY10Q96PN6 1610 aa13.03□□□□□ -0.32
TVP23A-205ENST00000572428 FBXO3Q9UK99 471 aa13.02□□□□□ -0.32
TVP23A-205ENST00000572428 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
TVP23A-205ENST00000572428 EHBP1L1Q8N3D4 1523 aa13.01□□□□□ -0.33
TVP23A-205ENST00000572428 ARHGEF11O15085 1522 aa13□□□□□ -0.33
TVP23A-205ENST00000572428 MAGI3Q5TCQ9 1506 aa13□□□□□ -0.33
TVP23A-205ENST00000572428 RIMBP3CA6NJZ7 1639 aa13□□□□□ -0.33
TVP23A-205ENST00000572428 RIMBP3BA6NNM3 1639 aa13□□□□□ -0.33
TVP23A-205ENST00000572428 RIMBP3Q9UFD9 1639 aa13□□□□□ -0.33
TVP23A-205ENST00000572428 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
TVP23A-205ENST00000572428 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
TVP23A-205ENST00000572428 ZCCHC11Q5TAX3 1644 aaKnown RBP12.98□□□□□ -0.33
TVP23A-205ENST00000572428 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
TVP23A-205ENST00000572428 CNKSR2Q8WXI2 1034 aa12.97□□□□□ -0.33
TVP23A-205ENST00000572428 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
TVP23A-205ENST00000572428 ATP10BO94823 1461 aa12.97□□□□□ -0.33
TVP23A-205ENST00000572428 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TVP23A-205ENST00000572428 AAMPQ13685 434 aa12.96□□□□□ -0.33
TVP23A-205ENST00000572428 ADRA2BP18089 450 aa12.95□□□□□ -0.34
TVP23A-205ENST00000572428 KANK4Q5T7N3 995 aaPredicted RBP12.94□□□□□ -0.34
TVP23A-205ENST00000572428 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
TVP23A-205ENST00000572428 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
TVP23A-205ENST00000572428 TROQ12816 1431 aaPredicted RBP12.9□□□□□ -0.34
TVP23A-205ENST00000572428 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
TVP23A-205ENST00000572428 IGSF3O75054 1194 aa12.89□□□□□ -0.35
TVP23A-205ENST00000572428 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
TVP23A-205ENST00000572428 KIF14Q15058 1648 aa12.89□□□□□ -0.35
TVP23A-205ENST00000572428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
TVP23A-205ENST00000572428 NCOA2Q15596 1464 aa12.89□□□□□ -0.35
TVP23A-205ENST00000572428 ACIN1Q9UKV3 1341 aaKnown RBP12.88□□□□□ -0.35
TVP23A-205ENST00000572428 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
TVP23A-205ENST00000572428 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
TVP23A-205ENST00000572428 ABCC10Q5T3U5 1492 aa12.86□□□□□ -0.35
TVP23A-205ENST00000572428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.86□□□□□ -0.35
TVP23A-205ENST00000572428 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
TVP23A-205ENST00000572428 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
TVP23A-205ENST00000572428 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
TVP23A-205ENST00000572428 FKBP8Q14318 412 aa12.84□□□□□ -0.35
TVP23A-205ENST00000572428 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
TVP23A-205ENST00000572428 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
TVP23A-205ENST00000572428 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
TVP23A-205ENST00000572428 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
TVP23A-205ENST00000572428 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
TVP23A-205ENST00000572428 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
TVP23A-205ENST00000572428 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
TVP23A-205ENST00000572428 MIA2Q96PC5 1412 aa12.82□□□□□ -0.36
TVP23A-205ENST00000572428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.81□□□□□ -0.36
TVP23A-205ENST00000572428 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
TVP23A-205ENST00000572428 RBM10P98175 930 aaKnown RBP12.81□□□□□ -0.36
TVP23A-205ENST00000572428 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
TVP23A-205ENST00000572428 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
TVP23A-205ENST00000572428 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
TVP23A-205ENST00000572428 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
TVP23A-205ENST00000572428 TTC37Q6PGP7 1564 aa12.8□□□□□ -0.36
TVP23A-205ENST00000572428 ARAP3Q8WWN8 1544 aa12.8□□□□□ -0.36
TVP23A-205ENST00000572428 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
TVP23A-205ENST00000572428 GPATCH8Q9UKJ3 1502 aaKnown RBP12.79□□□□□ -0.36
TVP23A-205ENST00000572428 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
TVP23A-205ENST00000572428 NEUROD1Q13562 356 aa12.78□□□□□ -0.36
TVP23A-205ENST00000572428 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
TVP23A-205ENST00000572428 GLI2P10070 1586 aa12.76□□□□□ -0.37
TVP23A-205ENST00000572428 CROCC2H7BZ55 1655 aa12.76□□□□□ -0.37
TVP23A-205ENST00000572428 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
TVP23A-205ENST00000572428 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
TVP23A-205ENST00000572428 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
TVP23A-205ENST00000572428 MAP3K4Q9Y6R4 1608 aa12.74□□□□□ -0.37
TVP23A-205ENST00000572428 ARID3CA6NKF2 412 aa12.73□□□□□ -0.37
TVP23A-205ENST00000572428 DEKP35659 375 aaKnown RBP12.72□□□□□ -0.37
TVP23A-205ENST00000572428 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
TVP23A-205ENST00000572428 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
TVP23A-205ENST00000572428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
TVP23A-205ENST00000572428 HNRNPUL2Q1KMD3 747 aaKnown RBP12.72□□□□□ -0.37
TVP23A-205ENST00000572428 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 PLCH2O75038 1416 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
TVP23A-205ENST00000572428 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
TVP23A-205ENST00000572428 GCC2Q8IWJ2 1684 aa12.68□□□□□ -0.38
TVP23A-205ENST00000572428 CYB5RLQ6IPT4 315 aa12.68□□□□□ -0.38
TVP23A-205ENST00000572428 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
TVP23A-205ENST00000572428 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
TVP23A-205ENST00000572428 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
TVP23A-205ENST00000572428 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
TVP23A-205ENST00000572428 ABCC1P33527 1531 aa12.66□□□□□ -0.38
TVP23A-205ENST00000572428 ARID3AQ99856 593 aa12.66□□□□□ -0.38
TVP23A-205ENST00000572428 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
TVP23A-205ENST00000572428 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
TVP23A-205ENST00000572428 NAP1L5Q96NT1 182 aaPredicted RBP12.66□□□□□ -0.38
TVP23A-205ENST00000572428 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
TVP23A-205ENST00000572428 PLEKHH2Q8IVE3 1493 aa12.65□□□□□ -0.38
TVP23A-205ENST00000572428 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
TVP23A-205ENST00000572428 ARHGAP5Q13017 1502 aa12.65□□□□□ -0.38
TVP23A-205ENST00000572428 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
TVP23A-205ENST00000572428 DAPK1P53355 1430 aa12.64□□□□□ -0.39
TVP23A-205ENST00000572428 PTPRKQ15262 1439 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms