RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 MTUS2Q5JR59 1369 aa28.61■■■□□ 2.17
PFN1-202ENST00000572383 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
PFN1-202ENST00000572383 ARHGEF40Q8TER5 1519 aa28.59■■■□□ 2.17
PFN1-202ENST00000572383 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
PFN1-202ENST00000572383 ZMYM4Q5VZL5 1548 aa28.56■■■□□ 2.16
PFN1-202ENST00000572383 EHBP1L1Q8N3D4 1523 aa28.56■■■□□ 2.16
PFN1-202ENST00000572383 CDC42BPBQ9Y5S2 1711 aa28.55■■■□□ 2.16
PFN1-202ENST00000572383 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
PFN1-202ENST00000572383 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
PFN1-202ENST00000572383 EFCAB2Q5VUJ9 269 aa28.51■■■□□ 2.15
PFN1-202ENST00000572383 LRRC9Q6ZRR7 1453 aa28.49■■■□□ 2.15
PFN1-202ENST00000572383 MADDQ8WXG6 1647 aa28.49■■■□□ 2.15
PFN1-202ENST00000572383 KANK4Q5T7N3 995 aaPredicted RBP28.48■■■□□ 2.15
PFN1-202ENST00000572383 SCAPERQ9BY12 1400 aa28.47■■■□□ 2.15
PFN1-202ENST00000572383 APLP2Q06481 763 aa28.47■■■□□ 2.15
PFN1-202ENST00000572383 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
PFN1-202ENST00000572383 POGZQ7Z3K3 1410 aa28.45■■■□□ 2.15
PFN1-202ENST00000572383 ZFYVE16Q7Z3T8 1539 aa28.45■■■□□ 2.15
PFN1-202ENST00000572383 PREX2Q70Z35 1606 aa28.45■■■□□ 2.14
PFN1-202ENST00000572383 CDC42BPAQ5VT25 1732 aa28.45■■■□□ 2.14
PFN1-202ENST00000572383 MAGI2Q86UL8 1455 aa28.45■■■□□ 2.14
PFN1-202ENST00000572383 GPATCH8Q9UKJ3 1502 aaKnown RBP28.43■■■□□ 2.14
PFN1-202ENST00000572383 RIMS1Q86UR5 1692 aaKnown RBP28.42■■■□□ 2.14
PFN1-202ENST00000572383 SUPT6HQ7KZ85 1726 aaKnown RBP28.42■■■□□ 2.14
PFN1-202ENST00000572383 YEATS2Q9ULM3 1422 aa28.42■■■□□ 2.14
PFN1-202ENST00000572383 CCNB3Q8WWL7 1395 aa28.41■■■□□ 2.14
PFN1-202ENST00000572383 PTPRMP28827 1452 aa28.4■■■□□ 2.14
PFN1-202ENST00000572383 NCOA2Q15596 1464 aa28.4■■■□□ 2.14
PFN1-202ENST00000572383 ITSN2Q9NZM3 1697 aa28.35■■■□□ 2.13
PFN1-202ENST00000572383 ZNF518AQ6AHZ1 1483 aa28.35■■■□□ 2.13
PFN1-202ENST00000572383 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
PFN1-202ENST00000572383 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
PFN1-202ENST00000572383 KDM5CP41229 1560 aa28.34■■■□□ 2.13
PFN1-202ENST00000572383 CFDP1Q9UEE9 299 aaPredicted RBP28.32■■■□□ 2.12
PFN1-202ENST00000572383 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
PFN1-202ENST00000572383 ABCC1P33527 1531 aa28.29■■■□□ 2.12
PFN1-202ENST00000572383 SAMD9LQ8IVG5 1584 aa28.28■■■□□ 2.12
PFN1-202ENST00000572383 ATP10AO60312 1499 aa28.26■■■□□ 2.11
PFN1-202ENST00000572383 ARHGEF12Q9NZN5 1544 aa28.25■■■□□ 2.11
PFN1-202ENST00000572383 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
PFN1-202ENST00000572383 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
PFN1-202ENST00000572383 DIP2CQ9Y2E4 1556 aa28.24■■■□□ 2.11
PFN1-202ENST00000572383 C9orf84Q5VXU9 1444 aa28.22■■■□□ 2.11
PFN1-202ENST00000572383 ZNF644Q9H582 1327 aaPredicted RBP28.21■■■□□ 2.11
PFN1-202ENST00000572383 KIDINS220Q9ULH0 1771 aa28.21■■■□□ 2.11
PFN1-202ENST00000572383 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
PFN1-202ENST00000572383 TRAPPC8Q9Y2L5 1435 aa28.19■■■□□ 2.1
PFN1-202ENST00000572383 SYCP2Q9BX26 1530 aa28.19■■■□□ 2.1
PFN1-202ENST00000572383 HNRNPMP52272 730 aaKnown RBP eCLIP28.18■■■□□ 2.1
PFN1-202ENST00000572383 MYOM3Q5VTT5 1437 aa28.18■■■□□ 2.1
PFN1-202ENST00000572383 PLEKHH2Q8IVE3 1493 aa28.17■■■□□ 2.1
PFN1-202ENST00000572383 REREQ9P2R6 1566 aa28.16■■■□□ 2.1
PFN1-202ENST00000572383 KIAA1107Q9UPP5 1409 aa28.16■■■□□ 2.1
PFN1-202ENST00000572383 PPARGC1BQ86YN6 1023 aaKnown RBP28.14■■■□□ 2.1
PFN1-202ENST00000572383 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.1
PFN1-202ENST00000572383 CAMSAP2Q08AD1 1489 aa28.14■■■□□ 2.09
PFN1-202ENST00000572383 LMTK3Q96Q04 1460 aa28.14■■■□□ 2.09
PFN1-202ENST00000572383 MLECQ14165 292 aa28.12■■■□□ 2.09
PFN1-202ENST00000572383 MIA2Q96PC5 1412 aa28.11■■■□□ 2.09
PFN1-202ENST00000572383 MBD5Q9P267 1494 aa28.09■■■□□ 2.09
PFN1-202ENST00000572383 PREX1Q8TCU6 1659 aa28.04■■■□□ 2.08
PFN1-202ENST00000572383 FGD6Q6ZV73 1430 aa28.04■■■□□ 2.08
PFN1-202ENST00000572383 AGLP35573 1532 aa28.03■■■□□ 2.08
PFN1-202ENST00000572383 C3P01024 1663 aa28.03■■■□□ 2.08
PFN1-202ENST00000572383 SPAG9O60271 1321 aaKnown RBP28.02■■■□□ 2.08
PFN1-202ENST00000572383 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
PFN1-202ENST00000572383 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
PFN1-202ENST00000572383 INO80Q9ULG1 1556 aaPredicted RBP28.02■■■□□ 2.08
PFN1-202ENST00000572383 CCDC141Q6ZP82 1450 aa28■■■□□ 2.07
PFN1-202ENST00000572383 ARHGEF5Q12774 1597 aa27.99■■■□□ 2.07
PFN1-202ENST00000572383 ATP7AQ04656 1500 aa27.98■■■□□ 2.07
PFN1-202ENST00000572383 SETD1BQ9UPS6 1966 aaKnown RBP27.98■■■□□ 2.07
PFN1-202ENST00000572383 RSPH4AQ5TD94 716 aa27.97■■■□□ 2.07
PFN1-202ENST00000572383 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
PFN1-202ENST00000572383 ILDR1Q86SU0 546 aaPredicted RBP27.94■■■□□ 2.06
PFN1-202ENST00000572383 ADGBQ8N7X0 1667 aa27.92■■■□□ 2.06
PFN1-202ENST00000572383 PLXNC1O60486 1568 aa27.91■■■□□ 2.06
PFN1-202ENST00000572383 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
PFN1-202ENST00000572383 MROH2AA6NES4 1674 aa27.89■■■□□ 2.06
PFN1-202ENST00000572383 HSPA2P54652 639 aa27.89■■■□□ 2.06
PFN1-202ENST00000572383 RTEL1-TNFRSF6BF6WH68 1400 aa27.89■■■□□ 2.06
PFN1-202ENST00000572383 TSPY4P0CV99 314 aa27.88■■■□□ 2.05
PFN1-202ENST00000572383 TSPY10P0CW01 314 aa27.88■■■□□ 2.05
PFN1-202ENST00000572383 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
PFN1-202ENST00000572383 A2MP01023 1474 aa27.86■■■□□ 2.05
PFN1-202ENST00000572383 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
PFN1-202ENST00000572383 ABCC5O15440 1437 aa27.85■■■□□ 2.05
PFN1-202ENST00000572383 DNMT1P26358 1616 aaKnown RBP27.85■■■□□ 2.05
PFN1-202ENST00000572383 CLTCQ00610 1675 aaKnown RBP27.84■■■□□ 2.05
PFN1-202ENST00000572383 ESF1Q9H501 851 aaKnown RBP27.84■■■□□ 2.05
PFN1-202ENST00000572383 MAST1Q9Y2H9 1570 aa27.84■■■□□ 2.05
PFN1-202ENST00000572383 DAPK1P53355 1430 aa27.84■■■□□ 2.05
PFN1-202ENST00000572383 CNTLNQ9NXG0 1405 aa27.84■■■□□ 2.05
PFN1-202ENST00000572383 CROCC2H7BZ55 1655 aa27.82■■■□□ 2.04
PFN1-202ENST00000572383 SHANK2Q9UPX8 1470 aa27.78■■■□□ 2.04
PFN1-202ENST00000572383 RRBP1Q9P2E9 1410 aaKnown RBP27.74■■■□□ 2.03
PFN1-202ENST00000572383 DHX29Q7Z478 1369 aaKnown RBP27.73■■■□□ 2.03
PFN1-202ENST00000572383 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
PFN1-202ENST00000572383 UHRF1BP1Q6BDS2 1440 aa27.73■■■□□ 2.03
PFN1-202ENST00000572383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.71■■■□□ 2.033e-8■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms