RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 GPATCH8Q9UKJ3 1502 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-208ENST00000572351 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
NPLOC4-208ENST00000572351 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
NPLOC4-208ENST00000572351 FANCAO15360 1455 aa14.5□□□□□ -0.09
NPLOC4-208ENST00000572351 MYOM3Q5VTT5 1437 aa14.5□□□□□ -0.09
NPLOC4-208ENST00000572351 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
NPLOC4-208ENST00000572351 ARAP3Q8WWN8 1544 aa14.48□□□□□ -0.09
NPLOC4-208ENST00000572351 NEO1Q92859 1461 aa14.48□□□□□ -0.09
NPLOC4-208ENST00000572351 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
NPLOC4-208ENST00000572351 MIA2Q96PC5 1412 aa14.47□□□□□ -0.09
NPLOC4-208ENST00000572351 MYO5CQ9NQX4 1742 aa14.46□□□□□ -0.1
NPLOC4-208ENST00000572351 PREX2Q70Z35 1606 aa14.45□□□□□ -0.1
NPLOC4-208ENST00000572351 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-208ENST00000572351 FGD6Q6ZV73 1430 aa14.45□□□□□ -0.1
NPLOC4-208ENST00000572351 ADGRL1O94910 1474 aa14.44□□□□□ -0.1
NPLOC4-208ENST00000572351 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-208ENST00000572351 ITSN2Q9NZM3 1697 aa14.44□□□□□ -0.1
NPLOC4-208ENST00000572351 CFAP74Q9C0B2 1584 aa14.43□□□□□ -0.1
NPLOC4-208ENST00000572351 SCAPERQ9BY12 1400 aa14.43□□□□□ -0.1
NPLOC4-208ENST00000572351 PLEKHH2Q8IVE3 1493 aa14.43□□□□□ -0.1
NPLOC4-208ENST00000572351 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
NPLOC4-208ENST00000572351 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
NPLOC4-208ENST00000572351 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
NPLOC4-208ENST00000572351 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
NPLOC4-208ENST00000572351 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
NPLOC4-208ENST00000572351 PPRC1Q5VV67 1664 aaKnown RBP14.4□□□□□ -0.1
NPLOC4-208ENST00000572351 DENND4BO75064 1496 aaPredicted RBP14.4□□□□□ -0.1
NPLOC4-208ENST00000572351 RAPGEF3O95398 923 aa14.39□□□□□ -0.11
NPLOC4-208ENST00000572351 MYT1LQ9UL68 1186 aa14.39□□□□□ -0.11
NPLOC4-208ENST00000572351 SAMD9LQ8IVG5 1584 aa14.39□□□□□ -0.11
NPLOC4-208ENST00000572351 CDC42BPBQ9Y5S2 1711 aa14.38□□□□□ -0.11
NPLOC4-208ENST00000572351 ABCC1P33527 1531 aa14.38□□□□□ -0.11
NPLOC4-208ENST00000572351 SYCP2Q9BX26 1530 aa14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 POGZQ7Z3K3 1410 aa14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 RRBP1Q9P2E9 1410 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 TCOF1Q13428 1488 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
NPLOC4-208ENST00000572351 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
NPLOC4-208ENST00000572351 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
NPLOC4-208ENST00000572351 ITGAEP38570 1179 aa14.36□□□□□ -0.11
NPLOC4-208ENST00000572351 ARHGEF12Q9NZN5 1544 aa14.36□□□□□ -0.11
NPLOC4-208ENST00000572351 TRAPPC8Q9Y2L5 1435 aa14.35□□□□□ -0.11
NPLOC4-208ENST00000572351 KDM6BO15054 1643 aa14.35□□□□□ -0.11
NPLOC4-208ENST00000572351 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
NPLOC4-208ENST00000572351 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-208ENST00000572351 CCDC141Q6ZP82 1450 aa14.34□□□□□ -0.11
NPLOC4-208ENST00000572351 MBD5Q9P267 1494 aa14.34□□□□□ -0.11
NPLOC4-208ENST00000572351 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
NPLOC4-208ENST00000572351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPLOC4-208ENST00000572351 DAPK1P53355 1430 aa14.31□□□□□ -0.12
NPLOC4-208ENST00000572351 ABCC5O15440 1437 aa14.3□□□□□ -0.12
NPLOC4-208ENST00000572351 CHIC2Q9UKJ5 165 aa14.29□□□□□ -0.12
NPLOC4-208ENST00000572351 ARHGEF5Q12774 1597 aa14.29□□□□□ -0.12
NPLOC4-208ENST00000572351 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
NPLOC4-208ENST00000572351 FRMPD1Q5SYB0 1578 aa14.26□□□□□ -0.13
NPLOC4-208ENST00000572351 MAGI2Q86UL8 1455 aa14.26□□□□□ -0.13
NPLOC4-208ENST00000572351 MLH3Q9UHC1 1453 aa14.26□□□□□ -0.13
NPLOC4-208ENST00000572351 SHANK2Q9UPX8 1470 aa14.26□□□□□ -0.13
NPLOC4-208ENST00000572351 KDM5CP41229 1560 aa14.26□□□□□ -0.13
NPLOC4-208ENST00000572351 ZMYM4Q5VZL5 1548 aa14.25□□□□□ -0.13
NPLOC4-208ENST00000572351 RTEL1-TNFRSF6BF6WH68 1400 aa14.25□□□□□ -0.13
NPLOC4-208ENST00000572351 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
NPLOC4-208ENST00000572351 DNMT1P26358 1616 aaKnown RBP14.25□□□□□ -0.13
NPLOC4-208ENST00000572351 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
NPLOC4-208ENST00000572351 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
NPLOC4-208ENST00000572351 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
NPLOC4-208ENST00000572351 HECW2Q9P2P5 1572 aa14.23□□□□□ -0.13
NPLOC4-208ENST00000572351 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
NPLOC4-208ENST00000572351 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
NPLOC4-208ENST00000572351 RICTORQ6R327 1708 aa14.23□□□□□ -0.13
NPLOC4-208ENST00000572351 PTPRKQ15262 1439 aa14.23□□□□□ -0.13
NPLOC4-208ENST00000572351 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
NPLOC4-208ENST00000572351 KIF15Q9NS87 1388 aa14.21□□□□□ -0.14
NPLOC4-208ENST00000572351 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
NPLOC4-208ENST00000572351 INO80Q9ULG1 1556 aaPredicted RBP14.2□□□□□ -0.14
NPLOC4-208ENST00000572351 MAST1Q9Y2H9 1570 aa14.2□□□□□ -0.14
NPLOC4-208ENST00000572351 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
NPLOC4-208ENST00000572351 ATP10AO60312 1499 aa14.19□□□□□ -0.14
NPLOC4-208ENST00000572351 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
NPLOC4-208ENST00000572351 ARHGEF40Q8TER5 1519 aa14.19□□□□□ -0.14
NPLOC4-208ENST00000572351 ADGRL2O95490 1459 aa14.18□□□□□ -0.14
NPLOC4-208ENST00000572351 A2MP01023 1474 aa14.17□□□□□ -0.14
NPLOC4-208ENST00000572351 CROCC2H7BZ55 1655 aa14.17□□□□□ -0.14
NPLOC4-208ENST00000572351 DHX29Q7Z478 1369 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-208ENST00000572351 DIP2CQ9Y2E4 1556 aa14.16□□□□□ -0.14
NPLOC4-208ENST00000572351 ABCA6Q8N139 1617 aa14.15□□□□□ -0.14
NPLOC4-208ENST00000572351 KIDINS220Q9ULH0 1771 aa14.15□□□□□ -0.14
NPLOC4-208ENST00000572351 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
NPLOC4-208ENST00000572351 DUOX2Q9NRD8 1548 aa14.14□□□□□ -0.15
NPLOC4-208ENST00000572351 ANKRD50Q9ULJ7 1429 aa14.14□□□□□ -0.15
NPLOC4-208ENST00000572351 KIF3BO15066 747 aa14.13□□□□□ -0.15
NPLOC4-208ENST00000572351 MLECQ14165 292 aa14.13□□□□□ -0.15
NPLOC4-208ENST00000572351 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
NPLOC4-208ENST00000572351 HFM1A2PYH4 1435 aa14.12□□□□□ -0.15
NPLOC4-208ENST00000572351 ERBINQ96RT1 1412 aa14.12□□□□□ -0.15
NPLOC4-208ENST00000572351 NAIPQ13075 1403 aa14.11□□□□□ -0.15
NPLOC4-208ENST00000572351 GGT6Q6P531 493 aa14.11□□□□□ -0.15
NPLOC4-208ENST00000572351 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms