RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 KIAA0556O60303 1618 aa8.42□□□□□ -1.06
CDH13-213ENST00000569454 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
CDH13-213ENST00000569454 P3H3Q8IVL6 736 aa8.41□□□□□ -1.06
CDH13-213ENST00000569454 NCOA2Q15596 1464 aa8.4□□□□□ -1.06
CDH13-213ENST00000569454 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.06
CDH13-213ENST00000569454 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
CDH13-213ENST00000569454 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
CDH13-213ENST00000569454 AKNAQ7Z591 1439 aa8.39□□□□□ -1.07
CDH13-213ENST00000569454 MIA2Q96PC5 1412 aa8.39□□□□□ -1.07
CDH13-213ENST00000569454 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
CDH13-213ENST00000569454 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
CDH13-213ENST00000569454 LRRIQ1Q96JM4 1722 aa8.38□□□□□ -1.07
CDH13-213ENST00000569454 DISP1Q96F81 1524 aa8.38□□□□□ -1.07
CDH13-213ENST00000569454 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
CDH13-213ENST00000569454 HFM1A2PYH4 1435 aa8.37□□□□□ -1.07
CDH13-213ENST00000569454 NUP160Q12769 1436 aa8.37□□□□□ -1.07
CDH13-213ENST00000569454 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
CDH13-213ENST00000569454 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
CDH13-213ENST00000569454 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
CDH13-213ENST00000569454 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
CDH13-213ENST00000569454 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
CDH13-213ENST00000569454 RAPGEF6Q8TEU7 1601 aa8.36□□□□□ -1.07
CDH13-213ENST00000569454 PTPN23Q9H3S7 1636 aa8.36□□□□□ -1.07
CDH13-213ENST00000569454 KCNA4P22459 653 aa8.35□□□□□ -1.07
CDH13-213ENST00000569454 CEP170Q5SW79 1584 aa8.35□□□□□ -1.07
CDH13-213ENST00000569454 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
CDH13-213ENST00000569454 CDK11AQ9UQ88 783 aaPredicted RBP8.34□□□□□ -1.07
CDH13-213ENST00000569454 MAGI3Q5TCQ9 1506 aa8.34□□□□□ -1.08
CDH13-213ENST00000569454 CHMP7Q8WUX9 453 aaPredicted RBP8.33□□□□□ -1.08
CDH13-213ENST00000569454 GCC2Q8IWJ2 1684 aa8.33□□□□□ -1.08
CDH13-213ENST00000569454 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
CDH13-213ENST00000569454 UACAQ9BZF9 1416 aa8.32□□□□□ -1.08
CDH13-213ENST00000569454 ITGAEP38570 1179 aa8.32□□□□□ -1.08
CDH13-213ENST00000569454 POLA2Q14181 598 aa8.32□□□□□ -1.08
CDH13-213ENST00000569454 CDK13Q14004 1512 aaKnown RBP8.32□□□□□ -1.08
CDH13-213ENST00000569454 ITSN2Q9NZM3 1697 aa8.31□□□□□ -1.08
CDH13-213ENST00000569454 ADCY10Q96PN6 1610 aa8.31□□□□□ -1.08
CDH13-213ENST00000569454 TROQ12816 1431 aaPredicted RBP8.3□□□□□ -1.08
CDH13-213ENST00000569454 NAIPQ13075 1403 aa8.3□□□□□ -1.08
CDH13-213ENST00000569454 SLC34A2O95436 690 aa8.29□□□□□ -1.08
CDH13-213ENST00000569454 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
CDH13-213ENST00000569454 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
CDH13-213ENST00000569454 ROCK1Q13464 1354 aa8.29□□□□□ -1.08
CDH13-213ENST00000569454 ABCA8O94911 1581 aa8.27□□□□□ -1.09
CDH13-213ENST00000569454 DNMT1P26358 1616 aaKnown RBP8.27□□□□□ -1.09
CDH13-213ENST00000569454 HAX1O00165 279 aa8.26□□□□□ -1.09
CDH13-213ENST00000569454 PTPRKQ15262 1439 aa8.26□□□□□ -1.09
CDH13-213ENST00000569454 KIF14Q15058 1648 aa8.25□□□□□ -1.09
CDH13-213ENST00000569454 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
CDH13-213ENST00000569454 DAPK1P53355 1430 aa8.25□□□□□ -1.09
CDH13-213ENST00000569454 PCDH10Q9P2E7 1040 aa8.24□□□□□ -1.09
CDH13-213ENST00000569454 SHROOM2Q13796 1616 aa8.24□□□□□ -1.09
CDH13-213ENST00000569454 PLB1Q6P1J6 1458 aa8.24□□□□□ -1.09
CDH13-213ENST00000569454 MYT1Q01538 1121 aa8.23□□□□□ -1.09
CDH13-213ENST00000569454 REM2Q8IYK8 340 aaPredicted RBP8.23□□□□□ -1.09
CDH13-213ENST00000569454 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
CDH13-213ENST00000569454 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
CDH13-213ENST00000569454 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
CDH13-213ENST00000569454 ADGRL2O95490 1459 aa8.22□□□□□ -1.09
CDH13-213ENST00000569454 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
CDH13-213ENST00000569454 FBLN2P98095 1184 aa8.22□□□□□ -1.09
CDH13-213ENST00000569454 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.09
CDH13-213ENST00000569454 GPATCH8Q9UKJ3 1502 aaKnown RBP8.21□□□□□ -1.1
CDH13-213ENST00000569454 FXR2P51116 673 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDH13-213ENST00000569454 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
CDH13-213ENST00000569454 ABCC5O15440 1437 aa8.2□□□□□ -1.1
CDH13-213ENST00000569454 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
CDH13-213ENST00000569454 CHD1O14646 1710 aa8.2□□□□□ -1.1
CDH13-213ENST00000569454 PTPRGP23470 1445 aa8.2□□□□□ -1.1
CDH13-213ENST00000569454 PLEKHD1A6NEE1 506 aa8.19□□□□□ -1.1
CDH13-213ENST00000569454 CFDP1Q9UEE9 299 aaPredicted RBP8.19□□□□□ -1.1
CDH13-213ENST00000569454 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
CDH13-213ENST00000569454 ATP10BO94823 1461 aa8.19□□□□□ -1.1
CDH13-213ENST00000569454 ABCC10Q5T3U5 1492 aa8.19□□□□□ -1.1
CDH13-213ENST00000569454 ARHGEF5Q12774 1597 aa8.18□□□□□ -1.1
CDH13-213ENST00000569454 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
CDH13-213ENST00000569454 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
CDH13-213ENST00000569454 ANKRD30AQ9BXX3 1397 aa8.17□□□□□ -1.1
CDH13-213ENST00000569454 ABCC2Q92887 1545 aa8.17□□□□□ -1.1
CDH13-213ENST00000569454 NCOA1Q15788 1441 aa8.16□□□□□ -1.1
CDH13-213ENST00000569454 CDC42BPAQ5VT25 1732 aa8.16□□□□□ -1.1
CDH13-213ENST00000569454 PREX2Q70Z35 1606 aa8.16□□□□□ -1.1
CDH13-213ENST00000569454 CLASP1Q7Z460 1538 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 PLEKHH2Q8IVE3 1493 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 NEUROD1Q13562 356 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 RSPH4AQ5TD94 716 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 SIN3AQ96ST3 1273 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 RRP7BPQ9NSQ0 103 aa8.15□□□□□ -1.1
CDH13-213ENST00000569454 UHRF1BP1LA0JNW5 1464 aa8.14□□□□□ -1.11
CDH13-213ENST00000569454 MIER1Q8N108 512 aa8.14□□□□□ -1.11
CDH13-213ENST00000569454 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 RPRD2Q5VT52 1461 aaKnown RBP8.13□□□□□ -1.11
CDH13-213ENST00000569454 C9orf84Q5VXU9 1444 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 KDM6BO15054 1643 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 KDM5BQ9UGL1 1544 aa8.13□□□□□ -1.11
CDH13-213ENST00000569454 DENND4BO75064 1496 aaPredicted RBP8.13□□□□□ -1.11
CDH13-213ENST00000569454 CCDC141Q6ZP82 1450 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms