RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 VPS8Q8N3P4 1428 aa14.82□□□□□ -0.04
UBR1-210ENST00000569337 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
UBR1-210ENST00000569337 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
UBR1-210ENST00000569337 MYO5CQ9NQX4 1742 aa14.8□□□□□ -0.04
UBR1-210ENST00000569337 AFAP1Q8N556 730 aa14.8□□□□□ -0.04
UBR1-210ENST00000569337 MYT1LQ9UL68 1186 aa14.8□□□□□ -0.04
UBR1-210ENST00000569337 MAGI2Q86UL8 1455 aa14.79□□□□□ -0.04
UBR1-210ENST00000569337 CCNB3Q8WWL7 1395 aa14.78□□□□□ -0.04
UBR1-210ENST00000569337 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
UBR1-210ENST00000569337 RICTORQ6R327 1708 aa14.78□□□□□ -0.04
UBR1-210ENST00000569337 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.04
UBR1-210ENST00000569337 YEATS2Q9ULM3 1422 aa14.77□□□□□ -0.04
UBR1-210ENST00000569337 ZMYM4Q5VZL5 1548 aa14.76□□□□□ -0.05
UBR1-210ENST00000569337 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
UBR1-210ENST00000569337 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
UBR1-210ENST00000569337 ARHGEF40Q8TER5 1519 aa14.75□□□□□ -0.05
UBR1-210ENST00000569337 PREX2Q70Z35 1606 aa14.74□□□□□ -0.05
UBR1-210ENST00000569337 EHBP1L1Q8N3D4 1523 aa14.73□□□□□ -0.05
UBR1-210ENST00000569337 CDC42BPBQ9Y5S2 1711 aa14.73□□□□□ -0.05
UBR1-210ENST00000569337 HNRNPMP52272 730 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBR1-210ENST00000569337 TRAPPC8Q9Y2L5 1435 aa14.73□□□□□ -0.05
UBR1-210ENST00000569337 ATP10AO60312 1499 aa14.72□□□□□ -0.05
UBR1-210ENST00000569337 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.05
UBR1-210ENST00000569337 MLECQ14165 292 aa14.71□□□□□ -0.05
UBR1-210ENST00000569337 APLP2Q06481 763 aa14.7□□□□□ -0.06
UBR1-210ENST00000569337 ABCC1P33527 1531 aa14.7□□□□□ -0.06
UBR1-210ENST00000569337 C9orf84Q5VXU9 1444 aa14.69□□□□□ -0.06
UBR1-210ENST00000569337 CDC42BPAQ5VT25 1732 aa14.69□□□□□ -0.06
UBR1-210ENST00000569337 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
UBR1-210ENST00000569337 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
UBR1-210ENST00000569337 KDM5CP41229 1560 aa14.68□□□□□ -0.06
UBR1-210ENST00000569337 KIAA1107Q9UPP5 1409 aa14.68□□□□□ -0.06
UBR1-210ENST00000569337 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
UBR1-210ENST00000569337 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
UBR1-210ENST00000569337 ZNF644Q9H582 1327 aaPredicted RBP14.67□□□□□ -0.06
UBR1-210ENST00000569337 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
UBR1-210ENST00000569337 NCOA2Q15596 1464 aa14.67□□□□□ -0.06
UBR1-210ENST00000569337 SAMD9LQ8IVG5 1584 aa14.66□□□□□ -0.06
UBR1-210ENST00000569337 PTPRMP28827 1452 aa14.66□□□□□ -0.06
UBR1-210ENST00000569337 LRRC9Q6ZRR7 1453 aa14.66□□□□□ -0.06
UBR1-210ENST00000569337 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
UBR1-210ENST00000569337 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
UBR1-210ENST00000569337 HECW2Q9P2P5 1572 aa14.65□□□□□ -0.06
UBR1-210ENST00000569337 SYCP2Q9BX26 1530 aa14.65□□□□□ -0.06
UBR1-210ENST00000569337 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
UBR1-210ENST00000569337 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
UBR1-210ENST00000569337 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
UBR1-210ENST00000569337 SUPT6HQ7KZ85 1726 aaKnown RBP14.62□□□□□ -0.07
UBR1-210ENST00000569337 MADDQ8WXG6 1647 aa14.62□□□□□ -0.07
UBR1-210ENST00000569337 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
UBR1-210ENST00000569337 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
UBR1-210ENST00000569337 ESF1Q9H501 851 aaKnown RBP14.6□□□□□ -0.07
UBR1-210ENST00000569337 MBD5Q9P267 1494 aa14.59□□□□□ -0.07
UBR1-210ENST00000569337 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
UBR1-210ENST00000569337 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
UBR1-210ENST00000569337 REREQ9P2R6 1566 aa14.58□□□□□ -0.08
UBR1-210ENST00000569337 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
UBR1-210ENST00000569337 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
UBR1-210ENST00000569337 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
UBR1-210ENST00000569337 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
UBR1-210ENST00000569337 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
UBR1-210ENST00000569337 AGLP35573 1532 aa14.56□□□□□ -0.08
UBR1-210ENST00000569337 ATP7AQ04656 1500 aa14.56□□□□□ -0.08
UBR1-210ENST00000569337 RIMS1Q86UR5 1692 aaKnown RBP14.55□□□□□ -0.08
UBR1-210ENST00000569337 CEBPAP49715 358 aaPredicted RBP14.55□□□□□ -0.08
UBR1-210ENST00000569337 RTEL1-TNFRSF6BF6WH68 1400 aa14.55□□□□□ -0.08
UBR1-210ENST00000569337 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
UBR1-210ENST00000569337 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
UBR1-210ENST00000569337 A2MP01023 1474 aa14.54□□□□□ -0.08
UBR1-210ENST00000569337 CCDC141Q6ZP82 1450 aa14.54□□□□□ -0.08
UBR1-210ENST00000569337 GGT6Q6P531 493 aa14.53□□□□□ -0.08
UBR1-210ENST00000569337 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
UBR1-210ENST00000569337 DHX29Q7Z478 1369 aaKnown RBP14.5□□□□□ -0.09
UBR1-210ENST00000569337 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
UBR1-210ENST00000569337 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
UBR1-210ENST00000569337 KIF3BO15066 747 aa14.48□□□□□ -0.09
UBR1-210ENST00000569337 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
UBR1-210ENST00000569337 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
UBR1-210ENST00000569337 LMTK3Q96Q04 1460 aa14.47□□□□□ -0.09
UBR1-210ENST00000569337 HSPA2P54652 639 aa14.47□□□□□ -0.09
UBR1-210ENST00000569337 PLXNC1O60486 1568 aa14.46□□□□□ -0.09
UBR1-210ENST00000569337 ZMYM3Q14202 1370 aa14.46□□□□□ -0.1
UBR1-210ENST00000569337 FGD6Q6ZV73 1430 aa14.44□□□□□ -0.1
UBR1-210ENST00000569337 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
UBR1-210ENST00000569337 UHRF1BP1Q6BDS2 1440 aa14.42□□□□□ -0.1
UBR1-210ENST00000569337 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
UBR1-210ENST00000569337 ABCC5O15440 1437 aa14.41□□□□□ -0.1
UBR1-210ENST00000569337 WASHC2CQ9Y4E1 1318 aa14.41□□□□□ -0.1
UBR1-210ENST00000569337 RRP7BPQ9NSQ0 103 aa14.4□□□□□ -0.1
UBR1-210ENST00000569337 PTPN23Q9H3S7 1636 aa14.4□□□□□ -0.1
UBR1-210ENST00000569337 TCOF1Q13428 1488 aaKnown RBP14.39□□□□□ -0.11
UBR1-210ENST00000569337 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
UBR1-210ENST00000569337 MAST1Q9Y2H9 1570 aa14.39□□□□□ -0.11
UBR1-210ENST00000569337 DAPK1P53355 1430 aa14.38□□□□□ -0.11
UBR1-210ENST00000569337 NPATQ14207 1427 aa14.38□□□□□ -0.11
UBR1-210ENST00000569337 C3P01024 1663 aa14.37□□□□□ -0.11
UBR1-210ENST00000569337 KIF15Q9NS87 1388 aa14.36□□□□□ -0.11
UBR1-210ENST00000569337 PHF23Q9BUL5 403 aaPredicted RBP14.36□□□□□ -0.11
UBR1-210ENST00000569337 SHANK2Q9UPX8 1470 aa14.36□□□□□ -0.11
UBR1-210ENST00000569337 MROH2AA6NES4 1674 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms