RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 DPY19L2Q6NUT2 758 aa10.67□□□□□ -0.7
HERC2-211ENST00000569335 MFRPQ9BY79 579 aa10.66□□□□□ -0.7
HERC2-211ENST00000569335 NLRP6P59044 892 aa10.64□□□□□ -0.71
HERC2-211ENST00000569335 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
HERC2-211ENST00000569335 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
HERC2-211ENST00000569335 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
HERC2-211ENST00000569335 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
HERC2-211ENST00000569335 HMGXB3Q12766 1538 aa10.63□□□□□ -0.71
HERC2-211ENST00000569335 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
HERC2-211ENST00000569335 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
HERC2-211ENST00000569335 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
HERC2-211ENST00000569335 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
HERC2-211ENST00000569335 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
HERC2-211ENST00000569335 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
HERC2-211ENST00000569335 EEA1Q15075 1411 aa10.55□□□□□ -0.72
HERC2-211ENST00000569335 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
HERC2-211ENST00000569335 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
HERC2-211ENST00000569335 G3V3G9 751 aa10.53□□□□□ -0.72
HERC2-211ENST00000569335 PPP1R37O75864 691 aa10.52□□□□□ -0.73
HERC2-211ENST00000569335 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
HERC2-211ENST00000569335 LOC105371045A0A1W2PR82 267 aa10.51□□□□□ -0.73
HERC2-211ENST00000569335 MICALL2Q8IY33 904 aa10.51□□□□□ -0.73
HERC2-211ENST00000569335 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
HERC2-211ENST00000569335 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
HERC2-211ENST00000569335 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
HERC2-211ENST00000569335 RYDENQ9NUL5 291 aaKnown RBP10.48□□□□□ -0.73
HERC2-211ENST00000569335 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
HERC2-211ENST00000569335 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
HERC2-211ENST00000569335 CFTRP13569 1480 aa10.42□□□□□ -0.74
HERC2-211ENST00000569335 SNPHO15079 494 aa10.42□□□□□ -0.74
HERC2-211ENST00000569335 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
HERC2-211ENST00000569335 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.74
HERC2-211ENST00000569335 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
HERC2-211ENST00000569335 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
HERC2-211ENST00000569335 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
HERC2-211ENST00000569335 FAM163AQ96GL9 167 aaPredicted RBP10.39□□□□□ -0.75
HERC2-211ENST00000569335 POTEMA6NI47 508 aa10.38□□□□□ -0.75
HERC2-211ENST00000569335 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
HERC2-211ENST00000569335 TNIKQ9UKE5 1360 aa10.38□□□□□ -0.75
HERC2-211ENST00000569335 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
HERC2-211ENST00000569335 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
HERC2-211ENST00000569335 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
HERC2-211ENST00000569335 SOGA1O94964 1423 aa10.36□□□□□ -0.75
HERC2-211ENST00000569335 ST18O60284 1047 aa10.36□□□□□ -0.75
HERC2-211ENST00000569335 KIF21BO75037 1637 aa10.36□□□□□ -0.75
HERC2-211ENST00000569335 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
HERC2-211ENST00000569335 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
HERC2-211ENST00000569335 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
HERC2-211ENST00000569335 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
HERC2-211ENST00000569335 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
HERC2-211ENST00000569335 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
HERC2-211ENST00000569335 C2orf72A6NCS6 295 aa10.31□□□□□ -0.76
HERC2-211ENST00000569335 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
HERC2-211ENST00000569335 KIF3CO14782 793 aa10.3□□□□□ -0.76
HERC2-211ENST00000569335 TMC2Q8TDI7 906 aa10.3□□□□□ -0.76
HERC2-211ENST00000569335 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
HERC2-211ENST00000569335 CUX1P39880 1505 aa10.28□□□□□ -0.76
HERC2-211ENST00000569335 HRCP23327 699 aa10.28□□□□□ -0.76
HERC2-211ENST00000569335 PCDH10Q9P2E7 1040 aa10.28□□□□□ -0.76
HERC2-211ENST00000569335 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
HERC2-211ENST00000569335 CADPS2Q86UW7 1296 aa10.27□□□□□ -0.77
HERC2-211ENST00000569335 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
HERC2-211ENST00000569335 CEP162Q5TB80 1403 aa10.26□□□□□ -0.77
HERC2-211ENST00000569335 PCGF6Q9BYE7 350 aa10.26□□□□□ -0.77
HERC2-211ENST00000569335 GPHNQ9NQX3 736 aaPredicted RBP10.26□□□□□ -0.77
HERC2-211ENST00000569335 NCKAP5LQ9HCH0 1330 aa10.25□□□□□ -0.77
HERC2-211ENST00000569335 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
HERC2-211ENST00000569335 CRISPLD2Q9H0B8 497 aa10.24□□□□□ -0.77
HERC2-211ENST00000569335 ZSWIM6Q9HCJ5 1215 aa10.22□□□□□ -0.77
HERC2-211ENST00000569335 RIMBP2O15034 1052 aa10.21□□□□□ -0.77
HERC2-211ENST00000569335 PDE4AP27815 886 aa10.21□□□□□ -0.77
HERC2-211ENST00000569335 DSG2Q14126 1118 aa10.21□□□□□ -0.77
HERC2-211ENST00000569335 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
HERC2-211ENST00000569335 FOXK1P85037 733 aa10.2□□□□□ -0.78
HERC2-211ENST00000569335 PLCB2Q00722 1185 aa10.2□□□□□ -0.78
HERC2-211ENST00000569335 KIF27Q86VH2 1401 aa10.2□□□□□ -0.78
HERC2-211ENST00000569335 LARP6Q9BRS8 491 aaKnown RBP10.2□□□□□ -0.78
HERC2-211ENST00000569335 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
HERC2-211ENST00000569335 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
HERC2-211ENST00000569335 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
HERC2-211ENST00000569335 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
HERC2-211ENST00000569335 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
HERC2-211ENST00000569335 EMP3P54852 163 aa10.17□□□□□ -0.78
HERC2-211ENST00000569335 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
HERC2-211ENST00000569335 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
HERC2-211ENST00000569335 FANCD2Q9BXW9 1451 aa10.16□□□□□ -0.78
HERC2-211ENST00000569335 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
HERC2-211ENST00000569335 SLC34A2O95436 690 aa10.15□□□□□ -0.78
HERC2-211ENST00000569335 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
HERC2-211ENST00000569335 MFSD10Q14728 455 aa10.14□□□□□ -0.79
HERC2-211ENST00000569335 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
HERC2-211ENST00000569335 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
HERC2-211ENST00000569335 CLIP1P30622 1438 aa10.13□□□□□ -0.79
HERC2-211ENST00000569335 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
HERC2-211ENST00000569335 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
HERC2-211ENST00000569335 ZEB1P37275 1124 aaPredicted RBP10.11□□□□□ -0.79
HERC2-211ENST00000569335 ABCA10Q8WWZ4 1543 aa10.11□□□□□ -0.79
HERC2-211ENST00000569335 FGD5Q6ZNL6 1462 aa10.1□□□□□ -0.79
HERC2-211ENST00000569335 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
HERC2-211ENST00000569335 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms