RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
CAPN3-219ENST00000569136 UACAQ9BZF9 1416 aa15□□□□□ -0.01
CAPN3-219ENST00000569136 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-219ENST00000569136 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
CAPN3-219ENST00000569136 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
CAPN3-219ENST00000569136 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
CAPN3-219ENST00000569136 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-219ENST00000569136 NUBP1P53384 320 aa14.94□□□□□ -0.02
CAPN3-219ENST00000569136 DCAF8Q5TAQ9 597 aa14.93□□□□□ -0.02
CAPN3-219ENST00000569136 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
CAPN3-219ENST00000569136 FAM212AQ96EL1 285 aa14.91□□□□□ -0.02
CAPN3-219ENST00000569136 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
CAPN3-219ENST00000569136 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
CAPN3-219ENST00000569136 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
CAPN3-219ENST00000569136 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
CAPN3-219ENST00000569136 KIF21BO75037 1637 aa14.88□□□□□ -0.03
CAPN3-219ENST00000569136 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
CAPN3-219ENST00000569136 GSE1Q14687 1217 aa14.87□□□□□ -0.03
CAPN3-219ENST00000569136 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
CAPN3-219ENST00000569136 ADCY10Q96PN6 1610 aa14.86□□□□□ -0.03
CAPN3-219ENST00000569136 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
CAPN3-219ENST00000569136 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
CAPN3-219ENST00000569136 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.04
CAPN3-219ENST00000569136 CTTNBP2Q8WZ74 1663 aa14.82□□□□□ -0.04
CAPN3-219ENST00000569136 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
CAPN3-219ENST00000569136 ECM2O94769 699 aaPredicted RBP14.81□□□□□ -0.04
CAPN3-219ENST00000569136 PKD2Q13563 968 aa14.81□□□□□ -0.04
CAPN3-219ENST00000569136 PLEKHD1A6NEE1 506 aa14.8□□□□□ -0.04
CAPN3-219ENST00000569136 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
CAPN3-219ENST00000569136 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
CAPN3-219ENST00000569136 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
CAPN3-219ENST00000569136 ABCA8O94911 1581 aa14.77□□□□□ -0.04
CAPN3-219ENST00000569136 EFCAB5A4FU69 1503 aa14.76□□□□□ -0.05
CAPN3-219ENST00000569136 ATP10BO94823 1461 aa14.76□□□□□ -0.05
CAPN3-219ENST00000569136 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-219ENST00000569136 SAMD9Q5K651 1589 aa14.76□□□□□ -0.05
CAPN3-219ENST00000569136 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
CAPN3-219ENST00000569136 POTEHQ6S545 545 aa14.75□□□□□ -0.05
CAPN3-219ENST00000569136 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-219ENST00000569136 HAX1O00165 279 aa14.74□□□□□ -0.05
CAPN3-219ENST00000569136 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
CAPN3-219ENST00000569136 WDR7Q9Y4E6 1490 aa14.73□□□□□ -0.05
CAPN3-219ENST00000569136 EPRSP07814 1512 aaKnown RBP14.72□□□□□ -0.05
CAPN3-219ENST00000569136 ARHGAP35Q9NRY4 1499 aa14.7□□□□□ -0.06
CAPN3-219ENST00000569136 GLI2P10070 1586 aa14.7□□□□□ -0.06
CAPN3-219ENST00000569136 PYGBP11216 843 aa14.7□□□□□ -0.06
CAPN3-219ENST00000569136 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
CAPN3-219ENST00000569136 CD109Q6YHK3 1445 aa14.68□□□□□ -0.06
CAPN3-219ENST00000569136 LOC105371045A0A1W2PR82 267 aa14.68□□□□□ -0.06
CAPN3-219ENST00000569136 NUP153P49790 1475 aaKnown RBP14.68□□□□□ -0.06
CAPN3-219ENST00000569136 CLIP1P30622 1438 aa14.67□□□□□ -0.06
CAPN3-219ENST00000569136 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
CAPN3-219ENST00000569136 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
CAPN3-219ENST00000569136 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
CAPN3-219ENST00000569136 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
CAPN3-219ENST00000569136 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
CAPN3-219ENST00000569136 CCDC61Q9Y6R9 512 aa14.63□□□□□ -0.07
CAPN3-219ENST00000569136 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
CAPN3-219ENST00000569136 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
CAPN3-219ENST00000569136 KIF13AQ9H1H9 1805 aa14.6□□□□□ -0.07
CAPN3-219ENST00000569136 RGL2O15211 777 aa14.6□□□□□ -0.07
CAPN3-219ENST00000569136 PHF12Q96QT6 1004 aa14.58□□□□□ -0.08
CAPN3-219ENST00000569136 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
CAPN3-219ENST00000569136 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-219ENST00000569136 EFCAB2Q5VUJ9 269 aa14.55□□□□□ -0.08
CAPN3-219ENST00000569136 COL17A1Q9UMD9 1497 aaPredicted RBP14.52□□□□□ -0.08
CAPN3-219ENST00000569136 TROQ12816 1431 aaPredicted RBP14.52□□□□□ -0.08
CAPN3-219ENST00000569136 EVX2Q03828 476 aa14.52□□□□□ -0.09
CAPN3-219ENST00000569136 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.09
CAPN3-219ENST00000569136 CCDC18Q5T9S5 1454 aa14.51□□□□□ -0.09
CAPN3-219ENST00000569136 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
CAPN3-219ENST00000569136 PCDHB13Q9Y5F0 798 aa14.51□□□□□ -0.09
CAPN3-219ENST00000569136 RIOK3O14730 519 aaKnown RBP14.5□□□□□ -0.09
CAPN3-219ENST00000569136 MAP3K13O43283 966 aa14.5□□□□□ -0.09
CAPN3-219ENST00000569136 KIF12Q96FN5 646 aa14.5□□□□□ -0.09
CAPN3-219ENST00000569136 HECW1Q76N89 1606 aa14.5□□□□□ -0.09
CAPN3-219ENST00000569136 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
CAPN3-219ENST00000569136 NEO1Q92859 1461 aa14.5□□□□□ -0.09
CAPN3-219ENST00000569136 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
CAPN3-219ENST00000569136 PLCH2O75038 1416 aa14.49□□□□□ -0.09
CAPN3-219ENST00000569136 KDM6BO15054 1643 aa14.49□□□□□ -0.09
CAPN3-219ENST00000569136 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
CAPN3-219ENST00000569136 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-219ENST00000569136 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
CAPN3-219ENST00000569136 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
CAPN3-219ENST00000569136 CFAP43Q8NDM7 1665 aa14.47□□□□□ -0.09
CAPN3-219ENST00000569136 PCDHB8Q9UN66 801 aa14.47□□□□□ -0.09
CAPN3-219ENST00000569136 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
CAPN3-219ENST00000569136 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
CAPN3-219ENST00000569136 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-219ENST00000569136 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
CAPN3-219ENST00000569136 MTUS2Q5JR59 1369 aa14.44□□□□□ -0.1
CAPN3-219ENST00000569136 PPRC1Q5VV67 1664 aaKnown RBP14.43□□□□□ -0.1
CAPN3-219ENST00000569136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.43□□□□□ -0.1
CAPN3-219ENST00000569136 FANCAO15360 1455 aa14.43□□□□□ -0.1
CAPN3-219ENST00000569136 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-219ENST00000569136 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
CAPN3-219ENST00000569136 CFDP1Q9UEE9 299 aaPredicted RBP14.41□□□□□ -0.1
CAPN3-219ENST00000569136 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
CAPN3-219ENST00000569136 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms