RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 MLECQ14165 292 aa29.46■■■□□ 2.31
SYNGR3-205ENST00000568896 PCF11O94913 1555 aaKnown RBP29.46■■■□□ 2.31
SYNGR3-205ENST00000568896 ZFYVE16Q7Z3T8 1539 aa29.45■■■□□ 2.31
SYNGR3-205ENST00000568896 RIMS1Q86UR5 1692 aaKnown RBP29.44■■■□□ 2.3
SYNGR3-205ENST00000568896 LMTK3Q96Q04 1460 aa29.43■■■□□ 2.3
SYNGR3-205ENST00000568896 CASKIN1Q8WXD9 1431 aa29.43■■■□□ 2.3
SYNGR3-205ENST00000568896 EFCAB2Q5VUJ9 269 aa29.42■■■□□ 2.3
SYNGR3-205ENST00000568896 SIGLEC1Q9BZZ2 1709 aa29.42■■■□□ 2.3
SYNGR3-205ENST00000568896 MAGI2Q86UL8 1455 aa29.42■■■□□ 2.3
SYNGR3-205ENST00000568896 POGZQ7Z3K3 1410 aa29.41■■■□□ 2.3
SYNGR3-205ENST00000568896 CDK11AQ9UQ88 783 aaPredicted RBP29.41■■■□□ 2.3
SYNGR3-205ENST00000568896 HSPA2P54652 639 aa29.39■■■□□ 2.3
SYNGR3-205ENST00000568896 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
SYNGR3-205ENST00000568896 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
SYNGR3-205ENST00000568896 LRRIQ1Q96JM4 1722 aa29.36■■■□□ 2.29
SYNGR3-205ENST00000568896 KIF14Q15058 1648 aa29.34■■■□□ 2.29
SYNGR3-205ENST00000568896 TROQ12816 1431 aaPredicted RBP29.33■■■□□ 2.29
SYNGR3-205ENST00000568896 ATP10AO60312 1499 aa29.31■■■□□ 2.28
SYNGR3-205ENST00000568896 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
SYNGR3-205ENST00000568896 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
SYNGR3-205ENST00000568896 MYO5CQ9NQX4 1742 aa29.28■■■□□ 2.28
SYNGR3-205ENST00000568896 C9orf84Q5VXU9 1444 aa29.26■■■□□ 2.27
SYNGR3-205ENST00000568896 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
SYNGR3-205ENST00000568896 CEBPAP49715 358 aaPredicted RBP29.23■■■□□ 2.27
SYNGR3-205ENST00000568896 MYT1LQ9UL68 1186 aa29.23■■■□□ 2.27
SYNGR3-205ENST00000568896 ARHGEF12Q9NZN5 1544 aa29.21■■■□□ 2.27
SYNGR3-205ENST00000568896 ZNF518AQ6AHZ1 1483 aa29.21■■■□□ 2.27
SYNGR3-205ENST00000568896 FER1L4A9Z1Z3 1794 aa29.2■■■□□ 2.26
SYNGR3-205ENST00000568896 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
SYNGR3-205ENST00000568896 KDM5CP41229 1560 aa29.14■■■□□ 2.26
SYNGR3-205ENST00000568896 TRAPPC8Q9Y2L5 1435 aa29.12■■■□□ 2.25
SYNGR3-205ENST00000568896 CDC42BPBQ9Y5S2 1711 aa29.11■■■□□ 2.25
SYNGR3-205ENST00000568896 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
SYNGR3-205ENST00000568896 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
SYNGR3-205ENST00000568896 ABCC1P33527 1531 aa29.04■■■□□ 2.24
SYNGR3-205ENST00000568896 CERKQ8TCT0 537 aa29.04■■■□□ 2.24
SYNGR3-205ENST00000568896 PREX2Q70Z35 1606 aa29.04■■■□□ 2.24
SYNGR3-205ENST00000568896 ABCA6Q8N139 1617 aa29.03■■■□□ 2.24
SYNGR3-205ENST00000568896 ZNF777Q9ULD5 760 aaPredicted RBP29.03■■■□□ 2.24
SYNGR3-205ENST00000568896 REREQ9P2R6 1566 aa29■■■□□ 2.23
SYNGR3-205ENST00000568896 MTUS2Q5JR59 1369 aa29■■■□□ 2.23
SYNGR3-205ENST00000568896 PREX1Q8TCU6 1659 aa28.99■■■□□ 2.23
SYNGR3-205ENST00000568896 TIAM1Q13009 1591 aa28.97■■■□□ 2.23
SYNGR3-205ENST00000568896 EHBP1L1Q8N3D4 1523 aa28.97■■■□□ 2.23
SYNGR3-205ENST00000568896 ITSN2Q9NZM3 1697 aa28.96■■■□□ 2.23
SYNGR3-205ENST00000568896 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
SYNGR3-205ENST00000568896 UHRF1BP1Q6BDS2 1440 aa28.95■■■□□ 2.23
SYNGR3-205ENST00000568896 HNRNPMP52272 730 aaKnown RBP eCLIP28.95■■■□□ 2.22
SYNGR3-205ENST00000568896 AGLP35573 1532 aa28.94■■■□□ 2.22
SYNGR3-205ENST00000568896 CDC42BPAQ5VT25 1732 aa28.94■■■□□ 2.22
SYNGR3-205ENST00000568896 GPATCH8Q9UKJ3 1502 aaKnown RBP28.93■■■□□ 2.22
SYNGR3-205ENST00000568896 KIDINS220Q9ULH0 1771 aa28.92■■■□□ 2.22
SYNGR3-205ENST00000568896 MAP3K1Q13233 1512 aa28.89■■■□□ 2.22
SYNGR3-205ENST00000568896 DMRT2Q9Y5R5 561 aa28.89■■■□□ 2.22
SYNGR3-205ENST00000568896 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
SYNGR3-205ENST00000568896 C3P01024 1663 aa28.88■■■□□ 2.21
SYNGR3-205ENST00000568896 SPAG9O60271 1321 aaKnown RBP28.88■■■□□ 2.21
SYNGR3-205ENST00000568896 STRCQ7RTU9 1775 aa28.88■■■□□ 2.21
SYNGR3-205ENST00000568896 SYCP2Q9BX26 1530 aa28.86■■■□□ 2.21
SYNGR3-205ENST00000568896 CFDP1Q9UEE9 299 aaPredicted RBP28.86■■■□□ 2.21
SYNGR3-205ENST00000568896 SETD1BQ9UPS6 1966 aaKnown RBP28.85■■■□□ 2.21
SYNGR3-205ENST00000568896 LRRC9Q6ZRR7 1453 aa28.85■■■□□ 2.21
SYNGR3-205ENST00000568896 CCNB3Q8WWL7 1395 aa28.81■■■□□ 2.2
SYNGR3-205ENST00000568896 CNTLNQ9NXG0 1405 aa28.8■■■□□ 2.2
SYNGR3-205ENST00000568896 SUPT6HQ7KZ85 1726 aaKnown RBP28.8■■■□□ 2.2
SYNGR3-205ENST00000568896 KIAA1107Q9UPP5 1409 aa28.79■■■□□ 2.2
SYNGR3-205ENST00000568896 NCOA2Q15596 1464 aa28.78■■■□□ 2.2
SYNGR3-205ENST00000568896 ZMYM3Q14202 1370 aa28.77■■■□□ 2.2
SYNGR3-205ENST00000568896 ZNF644Q9H582 1327 aaPredicted RBP28.77■■■□□ 2.2
SYNGR3-205ENST00000568896 KANK4Q5T7N3 995 aaPredicted RBP28.77■■■□□ 2.2
SYNGR3-205ENST00000568896 PTPRTO14522 1441 aa28.75■■■□□ 2.19
SYNGR3-205ENST00000568896 APLP2Q06481 763 aa28.74■■■□□ 2.19
SYNGR3-205ENST00000568896 ATP7AQ04656 1500 aa28.74■■■□□ 2.19
SYNGR3-205ENST00000568896 PLEKHH2Q8IVE3 1493 aa28.73■■■□□ 2.19
SYNGR3-205ENST00000568896 A2MP01023 1474 aa28.72■■■□□ 2.19
SYNGR3-205ENST00000568896 GGT6Q6P531 493 aa28.71■■■□□ 2.19
SYNGR3-205ENST00000568896 NCOA1Q15788 1441 aa28.69■■■□□ 2.18
SYNGR3-205ENST00000568896 NPATQ14207 1427 aa28.69■■■□□ 2.18
SYNGR3-205ENST00000568896 INO80Q9ULG1 1556 aaPredicted RBP28.68■■■□□ 2.18
SYNGR3-205ENST00000568896 PLXNC1O60486 1568 aa28.66■■■□□ 2.18
SYNGR3-205ENST00000568896 NCKAP5LQ9HCH0 1330 aa28.65■■■□□ 2.18
SYNGR3-205ENST00000568896 MBD5Q9P267 1494 aa28.64■■■□□ 2.17
SYNGR3-205ENST00000568896 MROH2AA6NES4 1674 aa28.64■■■□□ 2.17
SYNGR3-205ENST00000568896 CAMSAP1Q5T5Y3 1602 aa28.62■■■□□ 2.17
SYNGR3-205ENST00000568896 CLTCQ00610 1675 aaKnown RBP28.62■■■□□ 2.17
SYNGR3-205ENST00000568896 LTBP4Q8N2S1 1624 aa28.61■■■□□ 2.17
SYNGR3-205ENST00000568896 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
SYNGR3-205ENST00000568896 PPP6R1Q9UPN7 881 aa28.56■■■□□ 2.16
SYNGR3-205ENST00000568896 CAMSAP2Q08AD1 1489 aa28.55■■■□□ 2.16
SYNGR3-205ENST00000568896 MYOM3Q5VTT5 1437 aa28.55■■■□□ 2.16
SYNGR3-205ENST00000568896 DHX29Q7Z478 1369 aaKnown RBP28.53■■■□□ 2.16
SYNGR3-205ENST00000568896 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
SYNGR3-205ENST00000568896 ADGBQ8N7X0 1667 aa28.51■■■□□ 2.16
SYNGR3-205ENST00000568896 ZNF335Q9H4Z2 1342 aaPredicted RBP28.51■■■□□ 2.15
SYNGR3-205ENST00000568896 KIF3BO15066 747 aa28.5■■■□□ 2.15
SYNGR3-205ENST00000568896 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
SYNGR3-205ENST00000568896 MYO3AQ8NEV4 1616 aa28.5■■■□□ 2.15
SYNGR3-205ENST00000568896 PKD2Q13563 968 aa28.49■■■□□ 2.15
SYNGR3-205ENST00000568896 DISP3Q9P2K9 1392 aa28.49■■■□□ 2.15
SYNGR3-205ENST00000568896 CEP170BQ9Y4F5 1589 aaPredicted RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms