RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 KIF14Q15058 1648 aa22.44■■□□□ 1.18
NEIL1-219ENST00000568519 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
NEIL1-219ENST00000568519 NEO1Q92859 1461 aa22.42■■□□□ 1.18
NEIL1-219ENST00000568519 EHBP1L1Q8N3D4 1523 aa22.4■■□□□ 1.18
NEIL1-219ENST00000568519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.18
NEIL1-219ENST00000568519 PHLDB1Q86UU1 1377 aa22.39■■□□□ 1.18
NEIL1-219ENST00000568519 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
NEIL1-219ENST00000568519 RICTORQ6R327 1708 aa22.38■■□□□ 1.17
NEIL1-219ENST00000568519 TTC37Q6PGP7 1564 aa22.36■■□□□ 1.17
NEIL1-219ENST00000568519 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
NEIL1-219ENST00000568519 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
NEIL1-219ENST00000568519 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
NEIL1-219ENST00000568519 CFAP74Q9C0B2 1584 aa22.31■■□□□ 1.16
NEIL1-219ENST00000568519 APLP2Q06481 763 aa22.31■■□□□ 1.16
NEIL1-219ENST00000568519 PLCH2O75038 1416 aa22.31■■□□□ 1.16
NEIL1-219ENST00000568519 YEATS2Q9ULM3 1422 aa22.3■■□□□ 1.16
NEIL1-219ENST00000568519 DENND4BO75064 1496 aaPredicted RBP22.29■■□□□ 1.16
NEIL1-219ENST00000568519 SUPT6HQ7KZ85 1726 aaKnown RBP22.28■■□□□ 1.16
NEIL1-219ENST00000568519 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
NEIL1-219ENST00000568519 MLECQ14165 292 aa22.27■■□□□ 1.16
NEIL1-219ENST00000568519 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
NEIL1-219ENST00000568519 CERKQ8TCT0 537 aa22.25■■□□□ 1.15
NEIL1-219ENST00000568519 FANCAO15360 1455 aa22.25■■□□□ 1.15
NEIL1-219ENST00000568519 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
NEIL1-219ENST00000568519 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
NEIL1-219ENST00000568519 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
NEIL1-219ENST00000568519 ZMYM4Q5VZL5 1548 aa22.21■■□□□ 1.15
NEIL1-219ENST00000568519 ITSN2Q9NZM3 1697 aa22.21■■□□□ 1.15
NEIL1-219ENST00000568519 NCOA2Q15596 1464 aa22.21■■□□□ 1.15
NEIL1-219ENST00000568519 CDC42BPBQ9Y5S2 1711 aa22.2■■□□□ 1.14
NEIL1-219ENST00000568519 ILDR2Q71H61 639 aa22.2■■□□□ 1.14
NEIL1-219ENST00000568519 GPATCH8Q9UKJ3 1502 aaKnown RBP22.2■■□□□ 1.14
NEIL1-219ENST00000568519 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
NEIL1-219ENST00000568519 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
NEIL1-219ENST00000568519 ARHGAP5Q13017 1502 aa22.17■■□□□ 1.14
NEIL1-219ENST00000568519 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
NEIL1-219ENST00000568519 POGZQ7Z3K3 1410 aa22.15■■□□□ 1.14
NEIL1-219ENST00000568519 CEBPAP49715 358 aaPredicted RBP22.15■■□□□ 1.14
NEIL1-219ENST00000568519 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
NEIL1-219ENST00000568519 STRCQ7RTU9 1775 aa22.11■■□□□ 1.13
NEIL1-219ENST00000568519 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
NEIL1-219ENST00000568519 PREX1Q8TCU6 1659 aa22.1■■□□□ 1.13
NEIL1-219ENST00000568519 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
NEIL1-219ENST00000568519 DISP3Q9P2K9 1392 aa22.1■■□□□ 1.13
NEIL1-219ENST00000568519 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
NEIL1-219ENST00000568519 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
NEIL1-219ENST00000568519 ABCC1P33527 1531 aa22.09■■□□□ 1.13
NEIL1-219ENST00000568519 MYOM3Q5VTT5 1437 aa22.08■■□□□ 1.13
NEIL1-219ENST00000568519 KIAA1107Q9UPP5 1409 aa22.08■■□□□ 1.13
NEIL1-219ENST00000568519 MAGI2Q86UL8 1455 aa22.08■■□□□ 1.12
NEIL1-219ENST00000568519 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
NEIL1-219ENST00000568519 ATP10AO60312 1499 aa22.03■■□□□ 1.12
NEIL1-219ENST00000568519 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
NEIL1-219ENST00000568519 KDM5CP41229 1560 aa22.01■■□□□ 1.11
NEIL1-219ENST00000568519 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
NEIL1-219ENST00000568519 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
NEIL1-219ENST00000568519 SYCP2Q9BX26 1530 aa21.98■■□□□ 1.11
NEIL1-219ENST00000568519 SOCS7O14512 581 aa21.98■■□□□ 1.11
NEIL1-219ENST00000568519 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
NEIL1-219ENST00000568519 RSPH4AQ5TD94 716 aa21.97■■□□□ 1.11
NEIL1-219ENST00000568519 ARHGEF5Q12774 1597 aa21.96■■□□□ 1.11
NEIL1-219ENST00000568519 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
NEIL1-219ENST00000568519 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
NEIL1-219ENST00000568519 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
NEIL1-219ENST00000568519 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
NEIL1-219ENST00000568519 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
NEIL1-219ENST00000568519 SPATA31D1Q6ZQQ2 1576 aa21.94■■□□□ 1.1
NEIL1-219ENST00000568519 C3P01024 1663 aa21.93■■□□□ 1.1
NEIL1-219ENST00000568519 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
NEIL1-219ENST00000568519 TRAPPC8Q9Y2L5 1435 aa21.93■■□□□ 1.1
NEIL1-219ENST00000568519 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
NEIL1-219ENST00000568519 UHRF1BP1Q6BDS2 1440 aa21.92■■□□□ 1.1
NEIL1-219ENST00000568519 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
NEIL1-219ENST00000568519 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
NEIL1-219ENST00000568519 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
NEIL1-219ENST00000568519 SETD1BQ9UPS6 1966 aaKnown RBP21.89■■□□□ 1.09
NEIL1-219ENST00000568519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
NEIL1-219ENST00000568519 RTEL1-TNFRSF6BF6WH68 1400 aa21.88■■□□□ 1.09
NEIL1-219ENST00000568519 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
NEIL1-219ENST00000568519 INO80Q9ULG1 1556 aaPredicted RBP21.87■■□□□ 1.09
NEIL1-219ENST00000568519 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
NEIL1-219ENST00000568519 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
NEIL1-219ENST00000568519 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
NEIL1-219ENST00000568519 REREQ9P2R6 1566 aa21.85■■□□□ 1.09
NEIL1-219ENST00000568519 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
NEIL1-219ENST00000568519 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
NEIL1-219ENST00000568519 DNMT1P26358 1616 aaKnown RBP21.84■■□□□ 1.09
NEIL1-219ENST00000568519 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.09
NEIL1-219ENST00000568519 PTPRTO14522 1441 aa21.83■■□□□ 1.09
NEIL1-219ENST00000568519 ATP7AQ04656 1500 aa21.83■■□□□ 1.09
NEIL1-219ENST00000568519 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
NEIL1-219ENST00000568519 RRBP1Q9P2E9 1410 aaKnown RBP21.82■■□□□ 1.08
NEIL1-219ENST00000568519 CROCC2H7BZ55 1655 aa21.81■■□□□ 1.08
NEIL1-219ENST00000568519 TSPY4P0CV99 314 aa21.78■■□□□ 1.08
NEIL1-219ENST00000568519 TSPY10P0CW01 314 aa21.78■■□□□ 1.08
NEIL1-219ENST00000568519 ABCC5O15440 1437 aa21.77■■□□□ 1.08
NEIL1-219ENST00000568519 DAPK1P53355 1430 aa21.77■■□□□ 1.08
NEIL1-219ENST00000568519 NCOA1Q15788 1441 aa21.77■■□□□ 1.08
NEIL1-219ENST00000568519 ADGBQ8N7X0 1667 aa21.76■■□□□ 1.07
NEIL1-219ENST00000568519 PLXNC1O60486 1568 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms