RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ARHGAP35Q9NRY4 1499 aa15.45■□□□□ 0.06
SF3B3-211ENST00000568291 FER1L4A9Z1Z3 1794 aa15.44■□□□□ 0.06
SF3B3-211ENST00000568291 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
SF3B3-211ENST00000568291 KIF14Q15058 1648 aa15.43■□□□□ 0.06
SF3B3-211ENST00000568291 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
SF3B3-211ENST00000568291 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
SF3B3-211ENST00000568291 YEATS2Q9ULM3 1422 aa15.42■□□□□ 0.06
SF3B3-211ENST00000568291 MAGI2Q86UL8 1455 aa15.4■□□□□ 0.06
SF3B3-211ENST00000568291 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
SF3B3-211ENST00000568291 PLCH2O75038 1416 aa15.39■□□□□ 0.05
SF3B3-211ENST00000568291 SCAPERQ9BY12 1400 aa15.37■□□□□ 0.05
SF3B3-211ENST00000568291 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SF3B3-211ENST00000568291 CLIP1P30622 1438 aa15.34■□□□□ 0.05
SF3B3-211ENST00000568291 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
SF3B3-211ENST00000568291 ARHGAP5Q13017 1502 aa15.34■□□□□ 0.05
SF3B3-211ENST00000568291 KDM5CP41229 1560 aa15.33■□□□□ 0.05
SF3B3-211ENST00000568291 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.04
SF3B3-211ENST00000568291 C9orf84Q5VXU9 1444 aa15.33■□□□□ 0.04
SF3B3-211ENST00000568291 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.04
SF3B3-211ENST00000568291 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
SF3B3-211ENST00000568291 ZNF518AQ6AHZ1 1483 aa15.32■□□□□ 0.04
SF3B3-211ENST00000568291 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
SF3B3-211ENST00000568291 ATP10AO60312 1499 aa15.31■□□□□ 0.04
SF3B3-211ENST00000568291 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
SF3B3-211ENST00000568291 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
SF3B3-211ENST00000568291 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
SF3B3-211ENST00000568291 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
SF3B3-211ENST00000568291 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
SF3B3-211ENST00000568291 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
SF3B3-211ENST00000568291 MLECQ14165 292 aa15.28■□□□□ 0.04
SF3B3-211ENST00000568291 FBXO41Q8TF61 875 aa15.28■□□□□ 0.04
SF3B3-211ENST00000568291 ABCC1P33527 1531 aa15.27■□□□□ 0.04
SF3B3-211ENST00000568291 CDC42BPAQ5VT25 1732 aa15.27■□□□□ 0.04
SF3B3-211ENST00000568291 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
SF3B3-211ENST00000568291 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
SF3B3-211ENST00000568291 HSPA2P54652 639 aa15.25■□□□□ 0.03
SF3B3-211ENST00000568291 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
SF3B3-211ENST00000568291 FYCO1Q9BQS8 1478 aa15.23■□□□□ 0.03
SF3B3-211ENST00000568291 C3P01024 1663 aa15.21■□□□□ 0.03
SF3B3-211ENST00000568291 KIDINS220Q9ULH0 1771 aa15.21■□□□□ 0.02
SF3B3-211ENST00000568291 MLH3Q9UHC1 1453 aa15.2■□□□□ 0.02
SF3B3-211ENST00000568291 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
SF3B3-211ENST00000568291 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
SF3B3-211ENST00000568291 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
SF3B3-211ENST00000568291 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
SF3B3-211ENST00000568291 AGLP35573 1532 aa15.18■□□□□ 0.02
SF3B3-211ENST00000568291 SAMD9LQ8IVG5 1584 aa15.18■□□□□ 0.02
SF3B3-211ENST00000568291 STRCQ7RTU9 1775 aa15.18■□□□□ 0.02
SF3B3-211ENST00000568291 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
SF3B3-211ENST00000568291 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
SF3B3-211ENST00000568291 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-211ENST00000568291 MROH2AA6NES4 1674 aa15.13■□□□□ 0.01
SF3B3-211ENST00000568291 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
SF3B3-211ENST00000568291 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-211ENST00000568291 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
SF3B3-211ENST00000568291 ATP7AQ04656 1500 aa15.11■□□□□ 0.01
SF3B3-211ENST00000568291 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
SF3B3-211ENST00000568291 CNTLNQ9NXG0 1405 aa15.09■□□□□ 0.01
SF3B3-211ENST00000568291 PLXNC1O60486 1568 aa15.08■□□□□ 0
SF3B3-211ENST00000568291 CERKQ8TCT0 537 aa15.08■□□□□ 0
SF3B3-211ENST00000568291 MTUS2Q5JR59 1369 aa15.08■□□□□ 0
SF3B3-211ENST00000568291 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
SF3B3-211ENST00000568291 CLTCQ00610 1675 aaKnown RBP15.07■□□□□ 0
SF3B3-211ENST00000568291 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
SF3B3-211ENST00000568291 TIAM1Q13009 1591 aa15.07■□□□□ 0
SF3B3-211ENST00000568291 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
SF3B3-211ENST00000568291 EHBP1L1Q8N3D4 1523 aa15.06■□□□□ 0
SF3B3-211ENST00000568291 KANK4Q5T7N3 995 aaPredicted RBP15.05■□□□□ -0
SF3B3-211ENST00000568291 ZNF142P52746 1687 aaPredicted RBP15.05■□□□□ -0
SF3B3-211ENST00000568291 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
SF3B3-211ENST00000568291 SPAG9O60271 1321 aaKnown RBP15.04■□□□□ -0
SF3B3-211ENST00000568291 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
SF3B3-211ENST00000568291 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
SF3B3-211ENST00000568291 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
SF3B3-211ENST00000568291 KIAA1107Q9UPP5 1409 aa15.03■□□□□ -0
SF3B3-211ENST00000568291 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
SF3B3-211ENST00000568291 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
SF3B3-211ENST00000568291 A2MP01023 1474 aa15.02■□□□□ -0
SF3B3-211ENST00000568291 PTPRTO14522 1441 aa15.02■□□□□ -0
SF3B3-211ENST00000568291 NCOA1Q15788 1441 aa15.02■□□□□ -0
SF3B3-211ENST00000568291 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
SF3B3-211ENST00000568291 PPP6R1Q9UPN7 881 aa15.02■□□□□ -0
SF3B3-211ENST00000568291 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
SF3B3-211ENST00000568291 NPATQ14207 1427 aa15.01□□□□□ -0.01
SF3B3-211ENST00000568291 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
SF3B3-211ENST00000568291 MSH5O43196 834 aa15□□□□□ -0.01
SF3B3-211ENST00000568291 ADRA2BP18089 450 aa14.99□□□□□ -0.01
SF3B3-211ENST00000568291 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
SF3B3-211ENST00000568291 CEP170BQ9Y4F5 1589 aaPredicted RBP14.97□□□□□ -0.01
SF3B3-211ENST00000568291 ZMYM3Q14202 1370 aa14.96□□□□□ -0.02
SF3B3-211ENST00000568291 APLP2Q06481 763 aa14.94□□□□□ -0.02
SF3B3-211ENST00000568291 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
SF3B3-211ENST00000568291 PTPRKQ15262 1439 aa14.93□□□□□ -0.02
SF3B3-211ENST00000568291 CAMSAP2Q08AD1 1489 aa14.93□□□□□ -0.02
SF3B3-211ENST00000568291 IQSEC2Q5JU85 1478 aa14.93□□□□□ -0.02
SF3B3-211ENST00000568291 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
SF3B3-211ENST00000568291 NCOA2Q15596 1464 aa14.92□□□□□ -0.02
SF3B3-211ENST00000568291 CCDC141Q6ZP82 1450 aa14.92□□□□□ -0.02
SF3B3-211ENST00000568291 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
SF3B3-211ENST00000568291 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms