RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 FGD1P98174 961 aa11.99□□□□□ -0.49
HERC2-209ENST00000567869 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
HERC2-209ENST00000567869 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
HERC2-209ENST00000567869 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
HERC2-209ENST00000567869 SAMD9Q5K651 1589 aa11.99□□□□□ -0.49
HERC2-209ENST00000567869 GSE1Q14687 1217 aa11.98□□□□□ -0.49
HERC2-209ENST00000567869 GLIPR1L2Q4G1C9 344 aa11.98□□□□□ -0.49
HERC2-209ENST00000567869 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
HERC2-209ENST00000567869 IQGAP2Q13576 1575 aa11.97□□□□□ -0.49
HERC2-209ENST00000567869 NEFMP07197 916 aa11.97□□□□□ -0.49
HERC2-209ENST00000567869 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
HERC2-209ENST00000567869 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
HERC2-209ENST00000567869 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.49
HERC2-209ENST00000567869 ANP32AP39687 249 aaKnown RBP11.95□□□□□ -0.5
HERC2-209ENST00000567869 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
HERC2-209ENST00000567869 RBM10P98175 930 aaKnown RBP11.94□□□□□ -0.5
HERC2-209ENST00000567869 LRRIQ1Q96JM4 1722 aa11.93□□□□□ -0.5
HERC2-209ENST00000567869 PRDM4Q9UKN5 801 aa11.93□□□□□ -0.5
HERC2-209ENST00000567869 FGD6Q6ZV73 1430 aa11.93□□□□□ -0.5
HERC2-209ENST00000567869 NCOA2Q15596 1464 aa11.92□□□□□ -0.5
HERC2-209ENST00000567869 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
HERC2-209ENST00000567869 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
HERC2-209ENST00000567869 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
HERC2-209ENST00000567869 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
HERC2-209ENST00000567869 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
HERC2-209ENST00000567869 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
HERC2-209ENST00000567869 RRAGDQ9NQL2 400 aaPredicted RBP11.91□□□□□ -0.5
HERC2-209ENST00000567869 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
HERC2-209ENST00000567869 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
HERC2-209ENST00000567869 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
HERC2-209ENST00000567869 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
HERC2-209ENST00000567869 PPM1GO15355 546 aaPredicted RBP11.89□□□□□ -0.51
HERC2-209ENST00000567869 PTPRKQ15262 1439 aa11.88□□□□□ -0.51
HERC2-209ENST00000567869 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
HERC2-209ENST00000567869 MYOM3Q5VTT5 1437 aa11.88□□□□□ -0.51
HERC2-209ENST00000567869 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
HERC2-209ENST00000567869 FAM9BQ8IZU0 186 aa11.87□□□□□ -0.51
HERC2-209ENST00000567869 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
HERC2-209ENST00000567869 UGGT2Q9NYU1 1516 aa11.87□□□□□ -0.51
HERC2-209ENST00000567869 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
HERC2-209ENST00000567869 DISP1Q96F81 1524 aa11.87□□□□□ -0.51
HERC2-209ENST00000567869 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
HERC2-209ENST00000567869 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
HERC2-209ENST00000567869 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
HERC2-209ENST00000567869 SUPT6HQ7KZ85 1726 aaKnown RBP11.85□□□□□ -0.51
HERC2-209ENST00000567869 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
HERC2-209ENST00000567869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.85□□□□□ -0.51
HERC2-209ENST00000567869 HECW1Q76N89 1606 aa11.85□□□□□ -0.51
HERC2-209ENST00000567869 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
HERC2-209ENST00000567869 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
HERC2-209ENST00000567869 NFKBIBQ15653 356 aa11.83□□□□□ -0.51
HERC2-209ENST00000567869 KIAA0556O60303 1618 aa11.83□□□□□ -0.52
HERC2-209ENST00000567869 PDE4CQ08493 712 aa11.83□□□□□ -0.52
HERC2-209ENST00000567869 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
HERC2-209ENST00000567869 ZBED9Q6R2W3 1325 aa11.82□□□□□ -0.52
HERC2-209ENST00000567869 HSP90AA2PQ14568 343 aaPredicted RBP11.82□□□□□ -0.52
HERC2-209ENST00000567869 SMG6Q86US8 1419 aaKnown RBP11.82□□□□□ -0.52
HERC2-209ENST00000567869 ZNF644Q9H582 1327 aaPredicted RBP11.81□□□□□ -0.52
HERC2-209ENST00000567869 PLB1Q6P1J6 1458 aa11.81□□□□□ -0.52
HERC2-209ENST00000567869 PTPN23Q9H3S7 1636 aa11.8□□□□□ -0.52
HERC2-209ENST00000567869 NUP153P49790 1475 aaKnown RBP11.8□□□□□ -0.52
HERC2-209ENST00000567869 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
HERC2-209ENST00000567869 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
HERC2-209ENST00000567869 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
HERC2-209ENST00000567869 NAIPQ13075 1403 aa11.79□□□□□ -0.52
HERC2-209ENST00000567869 A0A0U1RQG5 324 aaPredicted RBP11.78□□□□□ -0.52
HERC2-209ENST00000567869 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
HERC2-209ENST00000567869 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
HERC2-209ENST00000567869 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
HERC2-209ENST00000567869 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
HERC2-209ENST00000567869 ARHGEF11O15085 1522 aa11.78□□□□□ -0.52
HERC2-209ENST00000567869 HFM1A2PYH4 1435 aa11.78□□□□□ -0.52
HERC2-209ENST00000567869 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.52
HERC2-209ENST00000567869 NUP160Q12769 1436 aa11.77□□□□□ -0.53
HERC2-209ENST00000567869 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
HERC2-209ENST00000567869 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
HERC2-209ENST00000567869 POLR3GLQ9BT43 218 aa11.75□□□□□ -0.53
HERC2-209ENST00000567869 CLCN1P35523 988 aa11.74□□□□□ -0.53
HERC2-209ENST00000567869 CFDP1Q9UEE9 299 aaPredicted RBP11.74□□□□□ -0.53
HERC2-209ENST00000567869 PDE4AP27815 886 aa11.74□□□□□ -0.53
HERC2-209ENST00000567869 POLR1AO95602 1720 aaPredicted RBP11.74□□□□□ -0.53
HERC2-209ENST00000567869 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
HERC2-209ENST00000567869 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
HERC2-209ENST00000567869 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
HERC2-209ENST00000567869 FOXD1Q16676 465 aa11.73□□□□□ -0.53
HERC2-209ENST00000567869 MIA2Q96PC5 1412 aa11.73□□□□□ -0.53
HERC2-209ENST00000567869 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
HERC2-209ENST00000567869 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
HERC2-209ENST00000567869 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.53
HERC2-209ENST00000567869 MS4A1P11836 297 aa11.71□□□□□ -0.53
HERC2-209ENST00000567869 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.54
HERC2-209ENST00000567869 HSP90AA1P07900 732 aaKnown RBP11.71□□□□□ -0.54
HERC2-209ENST00000567869 KDM6BO15054 1643 aa11.68□□□□□ -0.54
HERC2-209ENST00000567869 PTPRGP23470 1445 aa11.68□□□□□ -0.54
HERC2-209ENST00000567869 MPHOSPH9Q99550 1183 aa11.68□□□□□ -0.54
HERC2-209ENST00000567869 VIRMAQ69YN4 1812 aaKnown RBP11.68□□□□□ -0.54
HERC2-209ENST00000567869 ABCC5O15440 1437 aa11.68□□□□□ -0.54
HERC2-209ENST00000567869 DAPK1P53355 1430 aa11.68□□□□□ -0.54
HERC2-209ENST00000567869 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
HERC2-209ENST00000567869 ATP10BO94823 1461 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms