RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 KIF21BO75037 1637 aa15.31■□□□□ 0.04
CDH13-210ENST00000567445 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
CDH13-210ENST00000567445 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
CDH13-210ENST00000567445 NUP153P49790 1475 aaKnown RBP15.3■□□□□ 0.04
CDH13-210ENST00000567445 ARAP3Q8WWN8 1544 aa15.3■□□□□ 0.04
CDH13-210ENST00000567445 EFCAB5A4FU69 1503 aa15.28■□□□□ 0.04
CDH13-210ENST00000567445 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
CDH13-210ENST00000567445 NEO1Q92859 1461 aa15.24■□□□□ 0.03
CDH13-210ENST00000567445 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
CDH13-210ENST00000567445 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
CDH13-210ENST00000567445 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
CDH13-210ENST00000567445 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
CDH13-210ENST00000567445 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
CDH13-210ENST00000567445 FRMPD1Q5SYB0 1578 aa15.16■□□□□ 0.02
CDH13-210ENST00000567445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDH13-210ENST00000567445 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
CDH13-210ENST00000567445 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
CDH13-210ENST00000567445 HECW2Q9P2P5 1572 aa15.14■□□□□ 0.01
CDH13-210ENST00000567445 FANCAO15360 1455 aa15.14■□□□□ 0.01
CDH13-210ENST00000567445 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
CDH13-210ENST00000567445 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
CDH13-210ENST00000567445 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
CDH13-210ENST00000567445 DENND4BO75064 1496 aaPredicted RBP15.12■□□□□ 0.01
CDH13-210ENST00000567445 CFAP74Q9C0B2 1584 aa15.12■□□□□ 0.01
CDH13-210ENST00000567445 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
CDH13-210ENST00000567445 ATP1B4Q9UN42 357 aaPredicted RBP15.1■□□□□ 0.01
CDH13-210ENST00000567445 RICTORQ6R327 1708 aa15.1■□□□□ 0.01
CDH13-210ENST00000567445 ADAMTSL3P82987 1691 aa15.09■□□□□ 0.01
CDH13-210ENST00000567445 CDK11AQ9UQ88 783 aaPredicted RBP15.08■□□□□ 0.01
CDH13-210ENST00000567445 ARHGEF40Q8TER5 1519 aa15.08■□□□□ 0.01
CDH13-210ENST00000567445 ARID4BQ4LE39 1312 aaPredicted RBP15.08■□□□□ 0
CDH13-210ENST00000567445 PLCH2O75038 1416 aa15.07■□□□□ 0
CDH13-210ENST00000567445 PTPRMP28827 1452 aa15.07■□□□□ 0
CDH13-210ENST00000567445 BCORL1Q5H9F3 1711 aa15.07■□□□□ 0
CDH13-210ENST00000567445 ZMYM4Q5VZL5 1548 aa15.05■□□□□ 0
CDH13-210ENST00000567445 SCAPERQ9BY12 1400 aa15.04■□□□□ -0
CDH13-210ENST00000567445 MAGI2Q86UL8 1455 aa15.03■□□□□ -0
CDH13-210ENST00000567445 ZFYVE16Q7Z3T8 1539 aa15.03■□□□□ -0
CDH13-210ENST00000567445 MADDQ8WXG6 1647 aa15.02■□□□□ -0
CDH13-210ENST00000567445 MYO5CQ9NQX4 1742 aa15.02■□□□□ -0
CDH13-210ENST00000567445 TROQ12816 1431 aaPredicted RBP15.02□□□□□ -0.01
CDH13-210ENST00000567445 POGZQ7Z3K3 1410 aa15.02□□□□□ -0.01
CDH13-210ENST00000567445 KIF14Q15058 1648 aa15.02□□□□□ -0.01
CDH13-210ENST00000567445 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
CDH13-210ENST00000567445 YEATS2Q9ULM3 1422 aa15.01□□□□□ -0.01
CDH13-210ENST00000567445 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
CDH13-210ENST00000567445 CLIP1P30622 1438 aa15□□□□□ -0.01
CDH13-210ENST00000567445 ILDR1Q86SU0 546 aaPredicted RBP14.99□□□□□ -0.01
CDH13-210ENST00000567445 LRRIQ1Q96JM4 1722 aa14.99□□□□□ -0.01
CDH13-210ENST00000567445 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
CDH13-210ENST00000567445 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
CDH13-210ENST00000567445 PCF11O94913 1555 aaKnown RBP14.97□□□□□ -0.01
CDH13-210ENST00000567445 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
CDH13-210ENST00000567445 CCDC18Q5T9S5 1454 aa14.97□□□□□ -0.01
CDH13-210ENST00000567445 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.01
CDH13-210ENST00000567445 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
CDH13-210ENST00000567445 ATP10AO60312 1499 aa14.94□□□□□ -0.02
CDH13-210ENST00000567445 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
CDH13-210ENST00000567445 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
CDH13-210ENST00000567445 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
CDH13-210ENST00000567445 MLECQ14165 292 aa14.92□□□□□ -0.02
CDH13-210ENST00000567445 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
CDH13-210ENST00000567445 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
CDH13-210ENST00000567445 KDM5CP41229 1560 aa14.91□□□□□ -0.02
CDH13-210ENST00000567445 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
CDH13-210ENST00000567445 FER1L4A9Z1Z3 1794 aa14.89□□□□□ -0.03
CDH13-210ENST00000567445 POTEHQ6S545 545 aa14.89□□□□□ -0.03
CDH13-210ENST00000567445 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
CDH13-210ENST00000567445 ARHGEF12Q9NZN5 1544 aa14.88□□□□□ -0.03
CDH13-210ENST00000567445 MYT1LQ9UL68 1186 aa14.87□□□□□ -0.03
CDH13-210ENST00000567445 ABCC1P33527 1531 aa14.87□□□□□ -0.03
CDH13-210ENST00000567445 MLH3Q9UHC1 1453 aa14.86□□□□□ -0.03
CDH13-210ENST00000567445 DIP2CQ9Y2E4 1556 aa14.86□□□□□ -0.03
CDH13-210ENST00000567445 TRAPPC8Q9Y2L5 1435 aa14.85□□□□□ -0.03
CDH13-210ENST00000567445 CDC42BPAQ5VT25 1732 aa14.85□□□□□ -0.03
CDH13-210ENST00000567445 ITSN2Q9NZM3 1697 aa14.84□□□□□ -0.03
CDH13-210ENST00000567445 REREQ9P2R6 1566 aa14.83□□□□□ -0.03
CDH13-210ENST00000567445 HSPA2P54652 639 aa14.83□□□□□ -0.03
CDH13-210ENST00000567445 ABCA6Q8N139 1617 aa14.83□□□□□ -0.03
CDH13-210ENST00000567445 GPATCH8Q9UKJ3 1502 aaKnown RBP14.81□□□□□ -0.04
CDH13-210ENST00000567445 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
CDH13-210ENST00000567445 CEBPAP49715 358 aaPredicted RBP14.8□□□□□ -0.04
CDH13-210ENST00000567445 AGLP35573 1532 aa14.79□□□□□ -0.04
CDH13-210ENST00000567445 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
CDH13-210ENST00000567445 FBXO41Q8TF61 875 aa14.79□□□□□ -0.04
CDH13-210ENST00000567445 KIDINS220Q9ULH0 1771 aa14.78□□□□□ -0.04
CDH13-210ENST00000567445 MTUS2Q5JR59 1369 aa14.78□□□□□ -0.04
CDH13-210ENST00000567445 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
CDH13-210ENST00000567445 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.04
CDH13-210ENST00000567445 CFDP1Q9UEE9 299 aaPredicted RBP14.77□□□□□ -0.04
CDH13-210ENST00000567445 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.04
CDH13-210ENST00000567445 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.04
CDH13-210ENST00000567445 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
CDH13-210ENST00000567445 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
CDH13-210ENST00000567445 PLEKHH2Q8IVE3 1493 aa14.75□□□□□ -0.05
CDH13-210ENST00000567445 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
CDH13-210ENST00000567445 SETD1BQ9UPS6 1966 aaKnown RBP14.75□□□□□ -0.05
CDH13-210ENST00000567445 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
CDH13-210ENST00000567445 ESF1Q9H501 851 aaKnown RBP14.75□□□□□ -0.05
CDH13-210ENST00000567445 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms