RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
LINC00564-201ENST00000567258 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
LINC00564-201ENST00000567258 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
LINC00564-201ENST00000567258 KCNH8Q96L42 1107 aa17.17■□□□□ 0.34
LINC00564-201ENST00000567258 KIF21BO75037 1637 aa17.16■□□□□ 0.34
LINC00564-201ENST00000567258 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
LINC00564-201ENST00000567258 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
LINC00564-201ENST00000567258 ARID3CA6NKF2 412 aa17.12■□□□□ 0.33
LINC00564-201ENST00000567258 EVX2Q03828 476 aa17.1■□□□□ 0.33
LINC00564-201ENST00000567258 CD109Q6YHK3 1445 aa17.1■□□□□ 0.33
LINC00564-201ENST00000567258 UBTFP17480 764 aaKnown RBP17.09■□□□□ 0.33
LINC00564-201ENST00000567258 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
LINC00564-201ENST00000567258 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
LINC00564-201ENST00000567258 ATP10BO94823 1461 aa17.07■□□□□ 0.32
LINC00564-201ENST00000567258 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
LINC00564-201ENST00000567258 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
LINC00564-201ENST00000567258 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
LINC00564-201ENST00000567258 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
LINC00564-201ENST00000567258 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
LINC00564-201ENST00000567258 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
LINC00564-201ENST00000567258 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
LINC00564-201ENST00000567258 ABCA9Q8IUA7 1624 aa16.99■□□□□ 0.31
LINC00564-201ENST00000567258 PLEKHD1A6NEE1 506 aa16.99■□□□□ 0.31
LINC00564-201ENST00000567258 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
LINC00564-201ENST00000567258 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
LINC00564-201ENST00000567258 SSUH2Q9Y2M2 353 aa16.98■□□□□ 0.31
LINC00564-201ENST00000567258 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
LINC00564-201ENST00000567258 KDM4FA0A1W2PPD8 638 aa16.95■□□□□ 0.3
LINC00564-201ENST00000567258 PHLDB1Q86UU1 1377 aa16.94■□□□□ 0.3
LINC00564-201ENST00000567258 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
LINC00564-201ENST00000567258 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
LINC00564-201ENST00000567258 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
LINC00564-201ENST00000567258 HECW1Q76N89 1606 aa16.91■□□□□ 0.3
LINC00564-201ENST00000567258 NEO1Q92859 1461 aa16.89■□□□□ 0.29
LINC00564-201ENST00000567258 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
LINC00564-201ENST00000567258 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
LINC00564-201ENST00000567258 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
LINC00564-201ENST00000567258 CDK13Q14004 1512 aaKnown RBP16.86■□□□□ 0.29
LINC00564-201ENST00000567258 C19orf67A6NJJ6 358 aa16.83■□□□□ 0.28
LINC00564-201ENST00000567258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.83■□□□□ 0.28
LINC00564-201ENST00000567258 RAPGEF3O95398 923 aa16.82■□□□□ 0.28
LINC00564-201ENST00000567258 FANCAO15360 1455 aa16.81■□□□□ 0.28
LINC00564-201ENST00000567258 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
LINC00564-201ENST00000567258 MYO5CQ9NQX4 1742 aa16.8■□□□□ 0.28
LINC00564-201ENST00000567258 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
LINC00564-201ENST00000567258 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
LINC00564-201ENST00000567258 DENND4BO75064 1496 aaPredicted RBP16.79■□□□□ 0.28
LINC00564-201ENST00000567258 CLIP1P30622 1438 aa16.79■□□□□ 0.28
LINC00564-201ENST00000567258 KIF14Q15058 1648 aa16.78■□□□□ 0.28
LINC00564-201ENST00000567258 RICTORQ6R327 1708 aa16.77■□□□□ 0.28
LINC00564-201ENST00000567258 ARID4BQ4LE39 1312 aaPredicted RBP16.76■□□□□ 0.27
LINC00564-201ENST00000567258 LRRIQ1Q96JM4 1722 aa16.76■□□□□ 0.27
LINC00564-201ENST00000567258 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
LINC00564-201ENST00000567258 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
LINC00564-201ENST00000567258 PLCH2O75038 1416 aa16.73■□□□□ 0.27
LINC00564-201ENST00000567258 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
LINC00564-201ENST00000567258 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
LINC00564-201ENST00000567258 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
LINC00564-201ENST00000567258 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
LINC00564-201ENST00000567258 CASKIN1Q8WXD9 1431 aa16.71■□□□□ 0.27
LINC00564-201ENST00000567258 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
LINC00564-201ENST00000567258 GABBR2O75899 941 aa16.69■□□□□ 0.26
LINC00564-201ENST00000567258 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
LINC00564-201ENST00000567258 SCAPERQ9BY12 1400 aa16.69■□□□□ 0.26
LINC00564-201ENST00000567258 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
LINC00564-201ENST00000567258 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
LINC00564-201ENST00000567258 ZMYM4Q5VZL5 1548 aa16.67■□□□□ 0.26
LINC00564-201ENST00000567258 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
LINC00564-201ENST00000567258 ADAMTSL3P82987 1691 aa16.67■□□□□ 0.26
LINC00564-201ENST00000567258 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
LINC00564-201ENST00000567258 POGZQ7Z3K3 1410 aa16.66■□□□□ 0.26
LINC00564-201ENST00000567258 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
LINC00564-201ENST00000567258 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
LINC00564-201ENST00000567258 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
LINC00564-201ENST00000567258 PREX2Q70Z35 1606 aa16.62■□□□□ 0.25
LINC00564-201ENST00000567258 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
LINC00564-201ENST00000567258 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
LINC00564-201ENST00000567258 PTPRMP28827 1452 aa16.61■□□□□ 0.25
LINC00564-201ENST00000567258 RIMS1Q86UR5 1692 aaKnown RBP16.6■□□□□ 0.25
LINC00564-201ENST00000567258 CDC42BPAQ5VT25 1732 aa16.6■□□□□ 0.25
LINC00564-201ENST00000567258 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
LINC00564-201ENST00000567258 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
LINC00564-201ENST00000567258 ATP10AO60312 1499 aa16.57■□□□□ 0.24
LINC00564-201ENST00000567258 MLECQ14165 292 aa16.56■□□□□ 0.24
LINC00564-201ENST00000567258 C9orf84Q5VXU9 1444 aa16.55■□□□□ 0.24
LINC00564-201ENST00000567258 MTUS2Q5JR59 1369 aa16.55■□□□□ 0.24
LINC00564-201ENST00000567258 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
LINC00564-201ENST00000567258 ITSN2Q9NZM3 1697 aa16.55■□□□□ 0.24
LINC00564-201ENST00000567258 CEP162Q5TB80 1403 aa16.54■□□□□ 0.24
LINC00564-201ENST00000567258 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
LINC00564-201ENST00000567258 KDM5CP41229 1560 aa16.54■□□□□ 0.24
LINC00564-201ENST00000567258 ABCC1P33527 1531 aa16.52■□□□□ 0.24
LINC00564-201ENST00000567258 SIGLEC1Q9BZZ2 1709 aa16.52■□□□□ 0.24
LINC00564-201ENST00000567258 CCNB3Q8WWL7 1395 aa16.51■□□□□ 0.23
LINC00564-201ENST00000567258 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
LINC00564-201ENST00000567258 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
LINC00564-201ENST00000567258 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
LINC00564-201ENST00000567258 FARP1Q9Y4F1 1045 aaPredicted RBP16.48■□□□□ 0.23
LINC00564-201ENST00000567258 DIP2CQ9Y2E4 1556 aa16.47■□□□□ 0.23
LINC00564-201ENST00000567258 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms