RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
SCAMP2-207ENST00000566480 CDK11AQ9UQ88 783 aaPredicted RBP17.58■□□□□ 0.4
SCAMP2-207ENST00000566480 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
SCAMP2-207ENST00000566480 KDM6BO15054 1643 aa17.57■□□□□ 0.4
SCAMP2-207ENST00000566480 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
SCAMP2-207ENST00000566480 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
SCAMP2-207ENST00000566480 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
SCAMP2-207ENST00000566480 ZNF777Q9ULD5 760 aaPredicted RBP17.55■□□□□ 0.4
SCAMP2-207ENST00000566480 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
SCAMP2-207ENST00000566480 FOXD1Q16676 465 aa17.54■□□□□ 0.4
SCAMP2-207ENST00000566480 MYT1Q01538 1121 aa17.52■□□□□ 0.4
SCAMP2-207ENST00000566480 PTPRGP23470 1445 aa17.51■□□□□ 0.39
SCAMP2-207ENST00000566480 CFDP1Q9UEE9 299 aaPredicted RBP17.5■□□□□ 0.39
SCAMP2-207ENST00000566480 TIMELESSQ9UNS1 1208 aa17.5■□□□□ 0.39
SCAMP2-207ENST00000566480 DAPK1P53355 1430 aa17.5■□□□□ 0.39
SCAMP2-207ENST00000566480 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
SCAMP2-207ENST00000566480 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
SCAMP2-207ENST00000566480 KIF14Q15058 1648 aa17.49■□□□□ 0.39
SCAMP2-207ENST00000566480 GCC2Q8IWJ2 1684 aa17.49■□□□□ 0.39
SCAMP2-207ENST00000566480 ABCC5O15440 1437 aa17.49■□□□□ 0.39
SCAMP2-207ENST00000566480 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
SCAMP2-207ENST00000566480 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
SCAMP2-207ENST00000566480 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
SCAMP2-207ENST00000566480 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
SCAMP2-207ENST00000566480 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-207ENST00000566480 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-207ENST00000566480 AKNAQ7Z591 1439 aa17.43■□□□□ 0.38
SCAMP2-207ENST00000566480 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
SCAMP2-207ENST00000566480 CAMSAP2Q08AD1 1489 aa17.43■□□□□ 0.38
SCAMP2-207ENST00000566480 ABCA8O94911 1581 aa17.42■□□□□ 0.38
SCAMP2-207ENST00000566480 ATP10BO94823 1461 aa17.42■□□□□ 0.38
SCAMP2-207ENST00000566480 ZCCHC11Q5TAX3 1644 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-207ENST00000566480 PLPPR3Q6T4P5 718 aa17.4■□□□□ 0.38
SCAMP2-207ENST00000566480 ROCK1Q13464 1354 aa17.38■□□□□ 0.37
SCAMP2-207ENST00000566480 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-207ENST00000566480 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
SCAMP2-207ENST00000566480 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
SCAMP2-207ENST00000566480 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
SCAMP2-207ENST00000566480 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
SCAMP2-207ENST00000566480 NCOA1Q15788 1441 aa17.34■□□□□ 0.37
SCAMP2-207ENST00000566480 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.36
SCAMP2-207ENST00000566480 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
SCAMP2-207ENST00000566480 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCAMP2-207ENST00000566480 TSPOAP1O95153 1857 aa17.32■□□□□ 0.36
SCAMP2-207ENST00000566480 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
SCAMP2-207ENST00000566480 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
SCAMP2-207ENST00000566480 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
SCAMP2-207ENST00000566480 ASXL2Q76L83 1435 aa17.28■□□□□ 0.36
SCAMP2-207ENST00000566480 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.35
SCAMP2-207ENST00000566480 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
SCAMP2-207ENST00000566480 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
SCAMP2-207ENST00000566480 PZPP20742 1482 aa17.26■□□□□ 0.35
SCAMP2-207ENST00000566480 CROCC2H7BZ55 1655 aa17.25■□□□□ 0.35
SCAMP2-207ENST00000566480 ADGBQ8N7X0 1667 aa17.25■□□□□ 0.35
SCAMP2-207ENST00000566480 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
SCAMP2-207ENST00000566480 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
SCAMP2-207ENST00000566480 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
SCAMP2-207ENST00000566480 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
SCAMP2-207ENST00000566480 PKD2Q13563 968 aa17.24■□□□□ 0.35
SCAMP2-207ENST00000566480 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
SCAMP2-207ENST00000566480 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-207ENST00000566480 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
SCAMP2-207ENST00000566480 ANP32CO43423 234 aa17.22■□□□□ 0.35
SCAMP2-207ENST00000566480 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCAMP2-207ENST00000566480 EIF4G2P78344 907 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAMP2-207ENST00000566480 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
SCAMP2-207ENST00000566480 ZNF326Q5BKZ1 582 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-207ENST00000566480 NUP155O75694 1391 aa17.19■□□□□ 0.34
SCAMP2-207ENST00000566480 FAM69CQ0P6D2 419 aa17.19■□□□□ 0.34
SCAMP2-207ENST00000566480 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
SCAMP2-207ENST00000566480 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
SCAMP2-207ENST00000566480 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
SCAMP2-207ENST00000566480 PPRC1Q5VV67 1664 aaKnown RBP17.18■□□□□ 0.34
SCAMP2-207ENST00000566480 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
SCAMP2-207ENST00000566480 SAMD9LQ8IVG5 1584 aa17.17■□□□□ 0.34
SCAMP2-207ENST00000566480 KIF15Q9NS87 1388 aa17.17■□□□□ 0.34
SCAMP2-207ENST00000566480 MBD5Q9P267 1494 aa17.17■□□□□ 0.34
SCAMP2-207ENST00000566480 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
SCAMP2-207ENST00000566480 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
SCAMP2-207ENST00000566480 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
SCAMP2-207ENST00000566480 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
SCAMP2-207ENST00000566480 ARHGAP5Q13017 1502 aa17.14■□□□□ 0.33
SCAMP2-207ENST00000566480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCAMP2-207ENST00000566480 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
SCAMP2-207ENST00000566480 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SCAMP2-207ENST00000566480 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
SCAMP2-207ENST00000566480 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
SCAMP2-207ENST00000566480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
SCAMP2-207ENST00000566480 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
SCAMP2-207ENST00000566480 CCER2I3L3R5 266 aa17.08■□□□□ 0.33
SCAMP2-207ENST00000566480 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
SCAMP2-207ENST00000566480 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
SCAMP2-207ENST00000566480 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 ABCA9Q8IUA7 1624 aa17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 GLI2P10070 1586 aa17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
SCAMP2-207ENST00000566480 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
SCAMP2-207ENST00000566480 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms