RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
LSM3P5-201ENST00000566307 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
LSM3P5-201ENST00000566307 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
LSM3P5-201ENST00000566307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
LSM3P5-201ENST00000566307 CCER1Q8TC90 406 aaPredicted RBP13.25□□□□□ -0.29
LSM3P5-201ENST00000566307 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
LSM3P5-201ENST00000566307 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
LSM3P5-201ENST00000566307 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
LSM3P5-201ENST00000566307 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
LSM3P5-201ENST00000566307 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
LSM3P5-201ENST00000566307 GPATCH8Q9UKJ3 1502 aaKnown RBP13.22□□□□□ -0.29
LSM3P5-201ENST00000566307 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
LSM3P5-201ENST00000566307 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
LSM3P5-201ENST00000566307 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
LSM3P5-201ENST00000566307 ROCK1Q13464 1354 aa13.19□□□□□ -0.3
LSM3P5-201ENST00000566307 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
LSM3P5-201ENST00000566307 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
LSM3P5-201ENST00000566307 CDC42BPAQ5VT25 1732 aa13.18□□□□□ -0.3
LSM3P5-201ENST00000566307 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
LSM3P5-201ENST00000566307 ARID3CA6NKF2 412 aa13.17□□□□□ -0.3
LSM3P5-201ENST00000566307 GCC2Q8IWJ2 1684 aa13.16□□□□□ -0.3
LSM3P5-201ENST00000566307 ZBTB22O15209 634 aa13.16□□□□□ -0.3
LSM3P5-201ENST00000566307 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
LSM3P5-201ENST00000566307 DAPK1P53355 1430 aa13.15□□□□□ -0.3
LSM3P5-201ENST00000566307 NAIPQ13075 1403 aa13.15□□□□□ -0.3
LSM3P5-201ENST00000566307 PREX2Q70Z35 1606 aa13.15□□□□□ -0.3
LSM3P5-201ENST00000566307 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
LSM3P5-201ENST00000566307 ABCC5O15440 1437 aa13.13□□□□□ -0.31
LSM3P5-201ENST00000566307 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
LSM3P5-201ENST00000566307 ADGRL2O95490 1459 aa13.13□□□□□ -0.31
LSM3P5-201ENST00000566307 ITGAEP38570 1179 aa13.13□□□□□ -0.31
LSM3P5-201ENST00000566307 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
LSM3P5-201ENST00000566307 ARHGEF5Q12774 1597 aa13.12□□□□□ -0.31
LSM3P5-201ENST00000566307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
LSM3P5-201ENST00000566307 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
LSM3P5-201ENST00000566307 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
LSM3P5-201ENST00000566307 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
LSM3P5-201ENST00000566307 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
LSM3P5-201ENST00000566307 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
LSM3P5-201ENST00000566307 TTC37Q6PGP7 1564 aa13.09□□□□□ -0.31
LSM3P5-201ENST00000566307 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
LSM3P5-201ENST00000566307 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
LSM3P5-201ENST00000566307 WDR7Q9Y4E6 1490 aa13.08□□□□□ -0.32
LSM3P5-201ENST00000566307 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
LSM3P5-201ENST00000566307 PLCH2O75038 1416 aa13.07□□□□□ -0.32
LSM3P5-201ENST00000566307 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
LSM3P5-201ENST00000566307 SAMD9LQ8IVG5 1584 aa13.06□□□□□ -0.32
LSM3P5-201ENST00000566307 MAST1Q9Y2H9 1570 aa13.06□□□□□ -0.32
LSM3P5-201ENST00000566307 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
LSM3P5-201ENST00000566307 ZNF644Q9H582 1327 aaPredicted RBP13.05□□□□□ -0.32
LSM3P5-201ENST00000566307 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
LSM3P5-201ENST00000566307 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
LSM3P5-201ENST00000566307 TIMELESSQ9UNS1 1208 aa13.03□□□□□ -0.32
LSM3P5-201ENST00000566307 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
LSM3P5-201ENST00000566307 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
LSM3P5-201ENST00000566307 ARHGAP5Q13017 1502 aa13.02□□□□□ -0.33
LSM3P5-201ENST00000566307 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
LSM3P5-201ENST00000566307 ASXL2Q76L83 1435 aa13.01□□□□□ -0.33
LSM3P5-201ENST00000566307 ABCC1P33527 1531 aa12.99□□□□□ -0.33
LSM3P5-201ENST00000566307 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
LSM3P5-201ENST00000566307 NPM1P06748 294 aaKnown RBP eCLIP12.98□□□□□ -0.33
LSM3P5-201ENST00000566307 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
LSM3P5-201ENST00000566307 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
LSM3P5-201ENST00000566307 SYCP2Q9BX26 1530 aa12.98□□□□□ -0.33
LSM3P5-201ENST00000566307 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
LSM3P5-201ENST00000566307 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
LSM3P5-201ENST00000566307 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
LSM3P5-201ENST00000566307 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
LSM3P5-201ENST00000566307 KDM6BO15054 1643 aa12.97□□□□□ -0.33
LSM3P5-201ENST00000566307 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.33
LSM3P5-201ENST00000566307 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
LSM3P5-201ENST00000566307 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
LSM3P5-201ENST00000566307 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
LSM3P5-201ENST00000566307 RTEL1-TNFRSF6BF6WH68 1400 aa12.95□□□□□ -0.34
LSM3P5-201ENST00000566307 ANKRD50Q9ULJ7 1429 aa12.95□□□□□ -0.34
LSM3P5-201ENST00000566307 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
LSM3P5-201ENST00000566307 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
LSM3P5-201ENST00000566307 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
LSM3P5-201ENST00000566307 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
LSM3P5-201ENST00000566307 DENND4BO75064 1496 aaPredicted RBP12.93□□□□□ -0.34
LSM3P5-201ENST00000566307 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
LSM3P5-201ENST00000566307 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
LSM3P5-201ENST00000566307 FANCAO15360 1455 aa12.91□□□□□ -0.34
LSM3P5-201ENST00000566307 GLI2P10070 1586 aa12.91□□□□□ -0.34
LSM3P5-201ENST00000566307 DUOX2Q9NRD8 1548 aa12.9□□□□□ -0.34
LSM3P5-201ENST00000566307 PZPP20742 1482 aa12.9□□□□□ -0.34
LSM3P5-201ENST00000566307 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
LSM3P5-201ENST00000566307 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
LSM3P5-201ENST00000566307 UNC13BO14795 1591 aa12.88□□□□□ -0.35
LSM3P5-201ENST00000566307 INO80Q9ULG1 1556 aaPredicted RBP12.87□□□□□ -0.35
LSM3P5-201ENST00000566307 MAGI2Q86UL8 1455 aa12.87□□□□□ -0.35
LSM3P5-201ENST00000566307 NEO1Q92859 1461 aa12.87□□□□□ -0.35
LSM3P5-201ENST00000566307 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
LSM3P5-201ENST00000566307 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
LSM3P5-201ENST00000566307 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
LSM3P5-201ENST00000566307 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
LSM3P5-201ENST00000566307 CD109Q6YHK3 1445 aa12.86□□□□□ -0.35
LSM3P5-201ENST00000566307 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
LSM3P5-201ENST00000566307 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
LSM3P5-201ENST00000566307 KDM5CP41229 1560 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms