RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
CAPN3-215ENST00000565559 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
CAPN3-215ENST00000565559 YEATS2Q9ULM3 1422 aa19.28■□□□□ 0.68
CAPN3-215ENST00000565559 MLECQ14165 292 aa19.26■□□□□ 0.67
CAPN3-215ENST00000565559 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CAPN3-215ENST00000565559 EFCAB5A4FU69 1503 aa19.22■□□□□ 0.67
CAPN3-215ENST00000565559 ZFYVE16Q7Z3T8 1539 aa19.22■□□□□ 0.67
CAPN3-215ENST00000565559 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
CAPN3-215ENST00000565559 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
CAPN3-215ENST00000565559 RICTORQ6R327 1708 aa19.2■□□□□ 0.66
CAPN3-215ENST00000565559 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
CAPN3-215ENST00000565559 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
CAPN3-215ENST00000565559 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
CAPN3-215ENST00000565559 ZMYM4Q5VZL5 1548 aa19.19■□□□□ 0.66
CAPN3-215ENST00000565559 CFAP74Q9C0B2 1584 aa19.18■□□□□ 0.66
CAPN3-215ENST00000565559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.15■□□□□ 0.66
CAPN3-215ENST00000565559 UHRF1BP1Q6BDS2 1440 aa19.15■□□□□ 0.66
CAPN3-215ENST00000565559 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.65
CAPN3-215ENST00000565559 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.65
CAPN3-215ENST00000565559 PTPRTO14522 1441 aa19.13■□□□□ 0.65
CAPN3-215ENST00000565559 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
CAPN3-215ENST00000565559 IQSEC2Q5JU85 1478 aa19.12■□□□□ 0.65
CAPN3-215ENST00000565559 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
CAPN3-215ENST00000565559 SIGLEC1Q9BZZ2 1709 aa19.11■□□□□ 0.65
CAPN3-215ENST00000565559 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
CAPN3-215ENST00000565559 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
CAPN3-215ENST00000565559 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
CAPN3-215ENST00000565559 HECW1Q76N89 1606 aa19.08■□□□□ 0.65
CAPN3-215ENST00000565559 ATP10AO60312 1499 aa19.08■□□□□ 0.64
CAPN3-215ENST00000565559 NUP153P49790 1475 aaKnown RBP19.08■□□□□ 0.64
CAPN3-215ENST00000565559 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.64
CAPN3-215ENST00000565559 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
CAPN3-215ENST00000565559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
CAPN3-215ENST00000565559 LTBP4Q8N2S1 1624 aa19.03■□□□□ 0.64
CAPN3-215ENST00000565559 SAMD9Q5K651 1589 aa19.03■□□□□ 0.64
CAPN3-215ENST00000565559 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
CAPN3-215ENST00000565559 ESF1Q9H501 851 aaKnown RBP18.98■□□□□ 0.63
CAPN3-215ENST00000565559 SETD1BQ9UPS6 1966 aaKnown RBP18.98■□□□□ 0.63
CAPN3-215ENST00000565559 PLCH2O75038 1416 aa18.96■□□□□ 0.63
CAPN3-215ENST00000565559 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
CAPN3-215ENST00000565559 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
CAPN3-215ENST00000565559 TRAPPC8Q9Y2L5 1435 aa18.92■□□□□ 0.62
CAPN3-215ENST00000565559 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
CAPN3-215ENST00000565559 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
CAPN3-215ENST00000565559 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
CAPN3-215ENST00000565559 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
CAPN3-215ENST00000565559 ZNF335Q9H4Z2 1342 aaPredicted RBP18.87■□□□□ 0.61
CAPN3-215ENST00000565559 C3P01024 1663 aa18.86■□□□□ 0.61
CAPN3-215ENST00000565559 AFAP1Q8N556 730 aa18.84■□□□□ 0.61
CAPN3-215ENST00000565559 CAMSAP1Q5T5Y3 1602 aa18.84■□□□□ 0.61
CAPN3-215ENST00000565559 MED1Q15648 1581 aaPredicted RBP18.84■□□□□ 0.61
CAPN3-215ENST00000565559 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
CAPN3-215ENST00000565559 REREQ9P2R6 1566 aa18.83■□□□□ 0.6
CAPN3-215ENST00000565559 ZBTB22O15209 634 aa18.82■□□□□ 0.6
CAPN3-215ENST00000565559 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
CAPN3-215ENST00000565559 KDM5CP41229 1560 aa18.81■□□□□ 0.6
CAPN3-215ENST00000565559 DIP2CQ9Y2E4 1556 aa18.81■□□□□ 0.6
CAPN3-215ENST00000565559 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
CAPN3-215ENST00000565559 AGLP35573 1532 aa18.8■□□□□ 0.6
CAPN3-215ENST00000565559 CDK13Q14004 1512 aaKnown RBP18.8■□□□□ 0.6
CAPN3-215ENST00000565559 HSPA1LP34931 641 aa18.8■□□□□ 0.6
CAPN3-215ENST00000565559 PKD2Q13563 968 aa18.79■□□□□ 0.6
CAPN3-215ENST00000565559 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
CAPN3-215ENST00000565559 NPATQ14207 1427 aa18.79■□□□□ 0.6
CAPN3-215ENST00000565559 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
CAPN3-215ENST00000565559 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
CAPN3-215ENST00000565559 FOXD4L1Q9NU39 408 aa18.78■□□□□ 0.6
CAPN3-215ENST00000565559 CDK11AQ9UQ88 783 aaPredicted RBP18.78■□□□□ 0.6
CAPN3-215ENST00000565559 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
CAPN3-215ENST00000565559 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.6
CAPN3-215ENST00000565559 TOM1O60784 492 aa18.76■□□□□ 0.59
CAPN3-215ENST00000565559 MLH3Q9UHC1 1453 aa18.76■□□□□ 0.59
CAPN3-215ENST00000565559 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
CAPN3-215ENST00000565559 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
CAPN3-215ENST00000565559 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
CAPN3-215ENST00000565559 KIF14Q15058 1648 aa18.71■□□□□ 0.58
CAPN3-215ENST00000565559 ZMYM3Q14202 1370 aa18.69■□□□□ 0.58
CAPN3-215ENST00000565559 TCOF1Q13428 1488 aaKnown RBP18.69■□□□□ 0.58
CAPN3-215ENST00000565559 CLIP1P30622 1438 aa18.68■□□□□ 0.58
CAPN3-215ENST00000565559 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
CAPN3-215ENST00000565559 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
CAPN3-215ENST00000565559 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
CAPN3-215ENST00000565559 CPS1P31327 1500 aa18.64■□□□□ 0.57
CAPN3-215ENST00000565559 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
CAPN3-215ENST00000565559 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
CAPN3-215ENST00000565559 MYO3AQ8NEV4 1616 aa18.63■□□□□ 0.57
CAPN3-215ENST00000565559 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
CAPN3-215ENST00000565559 ABCC1P33527 1531 aa18.61■□□□□ 0.57
CAPN3-215ENST00000565559 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
CAPN3-215ENST00000565559 SUPT6HQ7KZ85 1726 aaKnown RBP18.6■□□□□ 0.57
CAPN3-215ENST00000565559 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
CAPN3-215ENST00000565559 EEA1Q15075 1411 aa18.58■□□□□ 0.57
CAPN3-215ENST00000565559 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
CAPN3-215ENST00000565559 KIDINS220Q9ULH0 1771 aa18.57■□□□□ 0.56
CAPN3-215ENST00000565559 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
CAPN3-215ENST00000565559 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
CAPN3-215ENST00000565559 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
CAPN3-215ENST00000565559 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
CAPN3-215ENST00000565559 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
CAPN3-215ENST00000565559 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms