RNA–Protein interactions for RNA: ENST00000564951.1

NEIL1-207, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 939 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-207ENST00000564951 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
NEIL1-207ENST00000564951 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
NEIL1-207ENST00000564951 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
NEIL1-207ENST00000564951 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
NEIL1-207ENST00000564951 PLCH2O75038 1416 aa23.25■■□□□ 1.31
NEIL1-207ENST00000564951 ATP10AO60312 1499 aa23.24■■□□□ 1.31
NEIL1-207ENST00000564951 SETD1BQ9UPS6 1966 aaKnown RBP23.23■■□□□ 1.31
NEIL1-207ENST00000564951 KDM5CP41229 1560 aa23.23■■□□□ 1.31
NEIL1-207ENST00000564951 MLECQ14165 292 aa23.23■■□□□ 1.31
NEIL1-207ENST00000564951 KIF14Q15058 1648 aa23.22■■□□□ 1.31
NEIL1-207ENST00000564951 SPATA31D1Q6ZQQ2 1576 aa23.22■■□□□ 1.31
NEIL1-207ENST00000564951 C3P01024 1663 aa23.21■■□□□ 1.31
NEIL1-207ENST00000564951 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
NEIL1-207ENST00000564951 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
NEIL1-207ENST00000564951 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
NEIL1-207ENST00000564951 DISP3Q9P2K9 1392 aa23.19■■□□□ 1.3
NEIL1-207ENST00000564951 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
NEIL1-207ENST00000564951 EEA1Q15075 1411 aa23.18■■□□□ 1.3
NEIL1-207ENST00000564951 ABCA6Q8N139 1617 aa23.17■■□□□ 1.3
NEIL1-207ENST00000564951 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
NEIL1-207ENST00000564951 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
NEIL1-207ENST00000564951 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
NEIL1-207ENST00000564951 SOCS7O14512 581 aa23.12■■□□□ 1.29
NEIL1-207ENST00000564951 CEBPAP49715 358 aaPredicted RBP23.12■■□□□ 1.29
NEIL1-207ENST00000564951 CDC42BPBQ9Y5S2 1711 aa23.11■■□□□ 1.29
NEIL1-207ENST00000564951 LTBP4Q8N2S1 1624 aa23.11■■□□□ 1.29
NEIL1-207ENST00000564951 ARHGAP5Q13017 1502 aa23.08■■□□□ 1.29
NEIL1-207ENST00000564951 PTPRTO14522 1441 aa23.08■■□□□ 1.28
NEIL1-207ENST00000564951 ITSN2Q9NZM3 1697 aa23.06■■□□□ 1.28
NEIL1-207ENST00000564951 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
NEIL1-207ENST00000564951 DMRT2Q9Y5R5 561 aa23.05■■□□□ 1.28
NEIL1-207ENST00000564951 AGLP35573 1532 aa23.04■■□□□ 1.28
NEIL1-207ENST00000564951 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
NEIL1-207ENST00000564951 ABCC1P33527 1531 aa23.03■■□□□ 1.28
NEIL1-207ENST00000564951 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
NEIL1-207ENST00000564951 KIDINS220Q9ULH0 1771 aa23.02■■□□□ 1.28
NEIL1-207ENST00000564951 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
NEIL1-207ENST00000564951 MLH3Q9UHC1 1453 aa23.02■■□□□ 1.28
NEIL1-207ENST00000564951 TROQ12816 1431 aaPredicted RBP23.01■■□□□ 1.27
NEIL1-207ENST00000564951 MROH2AA6NES4 1674 aa23■■□□□ 1.27
NEIL1-207ENST00000564951 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
NEIL1-207ENST00000564951 ARHGAP35Q9NRY4 1499 aa22.99■■□□□ 1.27
NEIL1-207ENST00000564951 AFAP1Q8N556 730 aa22.98■■□□□ 1.27
NEIL1-207ENST00000564951 CDC42BPAQ5VT25 1732 aa22.96■■□□□ 1.27
NEIL1-207ENST00000564951 ZNF142P52746 1687 aaPredicted RBP22.95■■□□□ 1.26
NEIL1-207ENST00000564951 CLIP1P30622 1438 aa22.94■■□□□ 1.26
NEIL1-207ENST00000564951 TRAPPC8Q9Y2L5 1435 aa22.94■■□□□ 1.26
NEIL1-207ENST00000564951 CAMSAP1Q5T5Y3 1602 aa22.93■■□□□ 1.26
NEIL1-207ENST00000564951 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
NEIL1-207ENST00000564951 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
NEIL1-207ENST00000564951 MYO3AQ8NEV4 1616 aa22.9■■□□□ 1.26
NEIL1-207ENST00000564951 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
NEIL1-207ENST00000564951 NPATQ14207 1427 aa22.87■■□□□ 1.25
NEIL1-207ENST00000564951 SAMD9LQ8IVG5 1584 aa22.87■■□□□ 1.25
NEIL1-207ENST00000564951 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
NEIL1-207ENST00000564951 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
NEIL1-207ENST00000564951 MYT1LQ9UL68 1186 aa22.84■■□□□ 1.25
NEIL1-207ENST00000564951 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
NEIL1-207ENST00000564951 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
NEIL1-207ENST00000564951 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
NEIL1-207ENST00000564951 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
NEIL1-207ENST00000564951 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
NEIL1-207ENST00000564951 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
NEIL1-207ENST00000564951 ESF1Q9H501 851 aaKnown RBP22.78■■□□□ 1.24
NEIL1-207ENST00000564951 TCOF1Q13428 1488 aaKnown RBP22.78■■□□□ 1.24
NEIL1-207ENST00000564951 ATP7AQ04656 1500 aa22.76■■□□□ 1.23
NEIL1-207ENST00000564951 ZNF335Q9H4Z2 1342 aaPredicted RBP22.76■■□□□ 1.23
NEIL1-207ENST00000564951 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
NEIL1-207ENST00000564951 CASKIN1Q8WXD9 1431 aa22.74■■□□□ 1.23
NEIL1-207ENST00000564951 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
NEIL1-207ENST00000564951 ZMYM3Q14202 1370 aa22.73■■□□□ 1.23
NEIL1-207ENST00000564951 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
NEIL1-207ENST00000564951 NCKAP5LQ9HCH0 1330 aa22.71■■□□□ 1.23
NEIL1-207ENST00000564951 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
NEIL1-207ENST00000564951 MED1Q15648 1581 aaPredicted RBP22.7■■□□□ 1.22
NEIL1-207ENST00000564951 ADGBQ8N7X0 1667 aa22.7■■□□□ 1.22
NEIL1-207ENST00000564951 FYCO1Q9BQS8 1478 aa22.67■■□□□ 1.22
NEIL1-207ENST00000564951 UBAP1LF5GYI3 381 aa22.67■■□□□ 1.22
NEIL1-207ENST00000564951 DNMT1P26358 1616 aaKnown RBP22.67■■□□□ 1.22
NEIL1-207ENST00000564951 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
NEIL1-207ENST00000564951 NEURL4Q96JN8 1562 aa22.66■■□□□ 1.22
NEIL1-207ENST00000564951 A2MP01023 1474 aa22.66■■□□□ 1.22
NEIL1-207ENST00000564951 PKD2Q13563 968 aa22.63■■□□□ 1.21
NEIL1-207ENST00000564951 SPAG9O60271 1321 aaKnown RBP22.62■■□□□ 1.21
NEIL1-207ENST00000564951 A2ML1A8K2U0 1454 aa22.6■■□□□ 1.21
NEIL1-207ENST00000564951 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
NEIL1-207ENST00000564951 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
NEIL1-207ENST00000564951 CPS1P31327 1500 aa22.57■■□□□ 1.2
NEIL1-207ENST00000564951 ALKQ9UM73 1620 aa22.57■■□□□ 1.2
NEIL1-207ENST00000564951 ZNF777Q9ULD5 760 aaPredicted RBP22.56■■□□□ 1.2
NEIL1-207ENST00000564951 PPP6R1Q9UPN7 881 aa22.56■■□□□ 1.2
NEIL1-207ENST00000564951 HNRNPMP52272 730 aaKnown RBP eCLIP22.54■■□□□ 1.2
NEIL1-207ENST00000564951 TIAM1Q13009 1591 aa22.54■■□□□ 1.2
NEIL1-207ENST00000564951 VWDEQ8N2E2 1590 aa22.53■■□□□ 1.2
NEIL1-207ENST00000564951 HSPA1LP34931 641 aa22.51■■□□□ 1.19
NEIL1-207ENST00000564951 SHANK2Q9UPX8 1470 aa22.5■■□□□ 1.19
NEIL1-207ENST00000564951 FAM135AQ9P2D6 1515 aa22.49■■□□□ 1.19
NEIL1-207ENST00000564951 GGT6Q6P531 493 aa22.49■■□□□ 1.19
NEIL1-207ENST00000564951 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
NEIL1-207ENST00000564951 KDM5DQ9BY66 1539 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms