RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DISP1Q96F81 1524 aa22.33■■□□□ 1.17
LINC00554-201ENST00000564841 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
LINC00554-201ENST00000564841 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
LINC00554-201ENST00000564841 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
LINC00554-201ENST00000564841 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
LINC00554-201ENST00000564841 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 PTPRKQ15262 1439 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 MYOM3Q5VTT5 1437 aa22.31■■□□□ 1.16
LINC00554-201ENST00000564841 CEP170Q5SW79 1584 aa22.3■■□□□ 1.16
LINC00554-201ENST00000564841 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
LINC00554-201ENST00000564841 UGGT2Q9NYU1 1516 aa22.29■■□□□ 1.16
LINC00554-201ENST00000564841 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
LINC00554-201ENST00000564841 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
LINC00554-201ENST00000564841 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
LINC00554-201ENST00000564841 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
LINC00554-201ENST00000564841 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 FOXD1Q16676 465 aa22.24■■□□□ 1.15
LINC00554-201ENST00000564841 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
LINC00554-201ENST00000564841 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
LINC00554-201ENST00000564841 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
LINC00554-201ENST00000564841 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
LINC00554-201ENST00000564841 IPO9Q96P70 1041 aaKnown RBP22.2■■□□□ 1.14
LINC00554-201ENST00000564841 ERICH6BQ5W0A0 696 aa22.19■■□□□ 1.14
LINC00554-201ENST00000564841 ZBTB47Q9UFB7 747 aaPredicted RBP22.19■■□□□ 1.14
LINC00554-201ENST00000564841 TIMELESSQ9UNS1 1208 aa22.18■■□□□ 1.14
LINC00554-201ENST00000564841 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
LINC00554-201ENST00000564841 CFDP1Q9UEE9 299 aaPredicted RBP22.17■■□□□ 1.14
LINC00554-201ENST00000564841 ANP32AP39687 249 aaKnown RBP22.17■■□□□ 1.14
LINC00554-201ENST00000564841 NPM2Q86SE8 214 aaKnown RBP22.16■■□□□ 1.14
LINC00554-201ENST00000564841 LAS1LQ9Y4W2 734 aaKnown RBP22.16■■□□□ 1.14
LINC00554-201ENST00000564841 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
LINC00554-201ENST00000564841 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
LINC00554-201ENST00000564841 NUP160Q12769 1436 aa22.14■■□□□ 1.14
LINC00554-201ENST00000564841 RAPGEF6Q8TEU7 1601 aa22.12■■□□□ 1.13
LINC00554-201ENST00000564841 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
LINC00554-201ENST00000564841 HSPA5P11021 654 aaKnown RBP22.12■■□□□ 1.13
LINC00554-201ENST00000564841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC00554-201ENST00000564841 NAIPQ13075 1403 aa22.1■■□□□ 1.13
LINC00554-201ENST00000564841 AKNAQ7Z591 1439 aa22.09■■□□□ 1.13
LINC00554-201ENST00000564841 PTPRGP23470 1445 aa22.08■■□□□ 1.13
LINC00554-201ENST00000564841 C11orf95C9JLR9 678 aaPredicted RBP22.07■■□□□ 1.12
LINC00554-201ENST00000564841 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
LINC00554-201ENST00000564841 NEFMP07197 916 aa22.04■■□□□ 1.12
LINC00554-201ENST00000564841 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
LINC00554-201ENST00000564841 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
LINC00554-201ENST00000564841 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
LINC00554-201ENST00000564841 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.11
LINC00554-201ENST00000564841 ZBED9Q6R2W3 1325 aa22.02■■□□□ 1.11
LINC00554-201ENST00000564841 BRPF3Q9ULD4 1205 aa22.01■■□□□ 1.11
LINC00554-201ENST00000564841 CHD1O14646 1710 aa21.99■■□□□ 1.11
LINC00554-201ENST00000564841 EIF5BO60841 1220 aaKnown RBP21.99■■□□□ 1.11
LINC00554-201ENST00000564841 HNRNPMP52272 730 aaKnown RBP eCLIP21.97■■□□□ 1.11
LINC00554-201ENST00000564841 MIA2Q96PC5 1412 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 ATP10BO94823 1461 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 KIF14Q15058 1648 aa21.97■■□□□ 1.11
LINC00554-201ENST00000564841 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
LINC00554-201ENST00000564841 KDM6BO15054 1643 aa21.95■■□□□ 1.1
LINC00554-201ENST00000564841 SLC4A1APQ9BWU0 796 aaKnown RBP21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ABCC5O15440 1437 aa21.94■■□□□ 1.1
LINC00554-201ENST00000564841 DAPK1P53355 1430 aa21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ZNF326Q5BKZ1 582 aaKnown RBP21.94■■□□□ 1.1
LINC00554-201ENST00000564841 ERCC6L2Q5T890 1561 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 UBE2Q2Q8WVN8 375 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
LINC00554-201ENST00000564841 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
LINC00554-201ENST00000564841 GPATCH8Q9UKJ3 1502 aaKnown RBP21.91■■□□□ 1.1
LINC00554-201ENST00000564841 EIF4G2P78344 907 aaKnown RBP eCLIP21.9■■□□□ 1.1
LINC00554-201ENST00000564841 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
LINC00554-201ENST00000564841 CAMSAP2Q08AD1 1489 aa21.87■■□□□ 1.09
LINC00554-201ENST00000564841 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 SKAP1Q86WV1 359 aa21.86■■□□□ 1.09
LINC00554-201ENST00000564841 ABCA8O94911 1581 aa21.84■■□□□ 1.09
LINC00554-201ENST00000564841 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.08
LINC00554-201ENST00000564841 NUDCQ9Y266 331 aa21.83■■□□□ 1.08
LINC00554-201ENST00000564841 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 CCDC7Q96M83 1385 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
LINC00554-201ENST00000564841 PDE4AP27815 886 aa21.79■■□□□ 1.08
LINC00554-201ENST00000564841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.78■■□□□ 1.08
LINC00554-201ENST00000564841 SMG6Q86US8 1419 aaKnown RBP21.77■■□□□ 1.08
LINC00554-201ENST00000564841 EXOC6Q8TAG9 804 aa21.77■■□□□ 1.08
LINC00554-201ENST00000564841 PKD2Q13563 968 aa21.76■■□□□ 1.07
LINC00554-201ENST00000564841 DENND4BO75064 1496 aaPredicted RBP21.75■■□□□ 1.07
LINC00554-201ENST00000564841 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
LINC00554-201ENST00000564841 NCOA1Q15788 1441 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 RNF123Q5XPI4 1314 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 ANKRD30AQ9BXX3 1397 aa21.74■■□□□ 1.07
LINC00554-201ENST00000564841 KIF7Q2M1P5 1343 aa21.73■■□□□ 1.07
LINC00554-201ENST00000564841 ROCK1Q13464 1354 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 GCC2Q8IWJ2 1684 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 GSE1Q14687 1217 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 FRAT1Q92837 279 aaPredicted RBP21.71■■□□□ 1.07
LINC00554-201ENST00000564841 USP35Q9P2H5 1018 aa21.71■■□□□ 1.07
LINC00554-201ENST00000564841 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
LINC00554-201ENST00000564841 NUP155O75694 1391 aa21.7■■□□□ 1.06
LINC00554-201ENST00000564841 BACH2Q9BYV9 841 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms