RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 SIGLEC1Q9BZZ2 1709 aa31.27■■■□□ 2.6
SLX1A-204ENST00000563995 HSPA2P54652 639 aa31.24■■■□□ 2.59
SLX1A-204ENST00000563995 ARID4BQ4LE39 1312 aaPredicted RBP31.24■■■□□ 2.59
SLX1A-204ENST00000563995 CDK13Q14004 1512 aaKnown RBP31.23■■■□□ 2.59
SLX1A-204ENST00000563995 HECW1Q76N89 1606 aa31.2■■■□□ 2.58
SLX1A-204ENST00000563995 ZFYVE16Q7Z3T8 1539 aa31.18■■■□□ 2.58
SLX1A-204ENST00000563995 CASKIN1Q8WXD9 1431 aa31.15■■■□□ 2.58
SLX1A-204ENST00000563995 YEATS2Q9ULM3 1422 aa31.13■■■□□ 2.57
SLX1A-204ENST00000563995 MAGI2Q86UL8 1455 aa31.12■■■□□ 2.57
SLX1A-204ENST00000563995 MYO5CQ9NQX4 1742 aa31.12■■■□□ 2.57
SLX1A-204ENST00000563995 FER1L4A9Z1Z3 1794 aa31.1■■■□□ 2.57
SLX1A-204ENST00000563995 FYCO1Q9BQS8 1478 aa31.1■■■□□ 2.57
SLX1A-204ENST00000563995 ATP1B4Q9UN42 357 aaPredicted RBP31.1■■■□□ 2.57
SLX1A-204ENST00000563995 PLCH2O75038 1416 aa31.08■■■□□ 2.57
SLX1A-204ENST00000563995 POGZQ7Z3K3 1410 aa31.08■■■□□ 2.57
SLX1A-204ENST00000563995 SPATA31D1Q6ZQQ2 1576 aa31.05■■■□□ 2.56
SLX1A-204ENST00000563995 PLPPR3Q6T4P5 718 aa31.05■■■□□ 2.56
SLX1A-204ENST00000563995 LRRIQ1Q96JM4 1722 aa31.04■■■□□ 2.56
SLX1A-204ENST00000563995 SCAPERQ9BY12 1400 aa31.03■■■□□ 2.56
SLX1A-204ENST00000563995 KIF14Q15058 1648 aa31.02■■■□□ 2.56
SLX1A-204ENST00000563995 CCDC18Q5T9S5 1454 aa31.01■■■□□ 2.55
SLX1A-204ENST00000563995 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
SLX1A-204ENST00000563995 ARHGEF12Q9NZN5 1544 aa30.95■■■□□ 2.55
SLX1A-204ENST00000563995 ATP10AO60312 1499 aa30.93■■■□□ 2.54
SLX1A-204ENST00000563995 C9orf84Q5VXU9 1444 aa30.92■■■□□ 2.54
SLX1A-204ENST00000563995 KDM5CP41229 1560 aa30.92■■■□□ 2.54
SLX1A-204ENST00000563995 CDK11AQ9UQ88 783 aaPredicted RBP30.91■■■□□ 2.54
SLX1A-204ENST00000563995 TROQ12816 1431 aaPredicted RBP30.9■■■□□ 2.54
SLX1A-204ENST00000563995 CDC42BPBQ9Y5S2 1711 aa30.89■■■□□ 2.54
SLX1A-204ENST00000563995 PREX1Q8TCU6 1659 aa30.88■■■□□ 2.53
SLX1A-204ENST00000563995 MLECQ14165 292 aa30.88■■■□□ 2.53
SLX1A-204ENST00000563995 EFCAB2Q5VUJ9 269 aa30.88■■■□□ 2.53
SLX1A-204ENST00000563995 ZNF518AQ6AHZ1 1483 aa30.87■■■□□ 2.53
SLX1A-204ENST00000563995 ARHGAP5Q13017 1502 aa30.86■■■□□ 2.53
SLX1A-204ENST00000563995 DIP2CQ9Y2E4 1556 aa30.82■■■□□ 2.52
SLX1A-204ENST00000563995 PREX2Q70Z35 1606 aa30.8■■■□□ 2.52
SLX1A-204ENST00000563995 DMRT2Q9Y5R5 561 aa30.8■■■□□ 2.52
SLX1A-204ENST00000563995 REREQ9P2R6 1566 aa30.79■■■□□ 2.52
SLX1A-204ENST00000563995 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
SLX1A-204ENST00000563995 ITSN2Q9NZM3 1697 aa30.75■■■□□ 2.51
SLX1A-204ENST00000563995 SETD1BQ9UPS6 1966 aaKnown RBP30.74■■■□□ 2.51
SLX1A-204ENST00000563995 TIAM1Q13009 1591 aa30.74■■■□□ 2.51
SLX1A-204ENST00000563995 ABCC1P33527 1531 aa30.73■■■□□ 2.51
SLX1A-204ENST00000563995 AFAP1Q8N556 730 aa30.73■■■□□ 2.51
SLX1A-204ENST00000563995 STRCQ7RTU9 1775 aa30.73■■■□□ 2.51
SLX1A-204ENST00000563995 CDC42BPAQ5VT25 1732 aa30.72■■■□□ 2.51
SLX1A-204ENST00000563995 MLH3Q9UHC1 1453 aa30.71■■■□□ 2.51
SLX1A-204ENST00000563995 MAP3K1Q13233 1512 aa30.7■■■□□ 2.51
SLX1A-204ENST00000563995 MTUS2Q5JR59 1369 aa30.69■■■□□ 2.5
SLX1A-204ENST00000563995 C3P01024 1663 aa30.69■■■□□ 2.5
SLX1A-204ENST00000563995 EHBP1L1Q8N3D4 1523 aa30.68■■■□□ 2.5
SLX1A-204ENST00000563995 CEBPAP49715 358 aaPredicted RBP30.67■■■□□ 2.5
SLX1A-204ENST00000563995 AGLP35573 1532 aa30.66■■■□□ 2.5
SLX1A-204ENST00000563995 KIDINS220Q9ULH0 1771 aa30.66■■■□□ 2.5
SLX1A-204ENST00000563995 TRAPPC8Q9Y2L5 1435 aa30.64■■■□□ 2.5
SLX1A-204ENST00000563995 UHRF1BP1Q6BDS2 1440 aa30.6■■■□□ 2.49
SLX1A-204ENST00000563995 LRRC9Q6ZRR7 1453 aa30.6■■■□□ 2.49
SLX1A-204ENST00000563995 APLP2Q06481 763 aa30.59■■■□□ 2.49
SLX1A-204ENST00000563995 MYT1LQ9UL68 1186 aa30.57■■■□□ 2.48
SLX1A-204ENST00000563995 PTPRTO14522 1441 aa30.56■■■□□ 2.48
SLX1A-204ENST00000563995 SAMD9LQ8IVG5 1584 aa30.54■■■□□ 2.48
SLX1A-204ENST00000563995 IQSEC2Q5JU85 1478 aa30.54■■■□□ 2.48
SLX1A-204ENST00000563995 LTBP4Q8N2S1 1624 aa30.52■■■□□ 2.48
SLX1A-204ENST00000563995 KANK4Q5T7N3 995 aaPredicted RBP30.52■■■□□ 2.48
SLX1A-204ENST00000563995 SUPT6HQ7KZ85 1726 aaKnown RBP30.52■■■□□ 2.48
SLX1A-204ENST00000563995 MROH2AA6NES4 1674 aa30.5■■■□□ 2.47
SLX1A-204ENST00000563995 SYCP2Q9BX26 1530 aa30.48■■■□□ 2.47
SLX1A-204ENST00000563995 NCOA2Q15596 1464 aa30.48■■■□□ 2.47
SLX1A-204ENST00000563995 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
SLX1A-204ENST00000563995 CCNB3Q8WWL7 1395 aa30.46■■■□□ 2.47
SLX1A-204ENST00000563995 CNTLNQ9NXG0 1405 aa30.45■■■□□ 2.46
SLX1A-204ENST00000563995 INO80Q9ULG1 1556 aaPredicted RBP30.41■■■□□ 2.46
SLX1A-204ENST00000563995 PLXNC1O60486 1568 aa30.4■■■□□ 2.46
SLX1A-204ENST00000563995 ATP7AQ04656 1500 aa30.38■■■□□ 2.45
SLX1A-204ENST00000563995 ESF1Q9H501 851 aaKnown RBP30.38■■■□□ 2.45
SLX1A-204ENST00000563995 NCOA1Q15788 1441 aa30.37■■■□□ 2.45
SLX1A-204ENST00000563995 CLTCQ00610 1675 aaKnown RBP30.36■■■□□ 2.45
SLX1A-204ENST00000563995 NPATQ14207 1427 aa30.35■■■□□ 2.45
SLX1A-204ENST00000563995 KIAA1107Q9UPP5 1409 aa30.34■■■□□ 2.45
SLX1A-204ENST00000563995 CFDP1Q9UEE9 299 aaPredicted RBP30.34■■■□□ 2.45
SLX1A-204ENST00000563995 ZNF777Q9ULD5 760 aaPredicted RBP30.34■■■□□ 2.45
SLX1A-204ENST00000563995 PLEKHH2Q8IVE3 1493 aa30.32■■■□□ 2.44
SLX1A-204ENST00000563995 ZNF142P52746 1687 aaPredicted RBP30.32■■■□□ 2.44
SLX1A-204ENST00000563995 SPAG9O60271 1321 aaKnown RBP30.31■■■□□ 2.44
SLX1A-204ENST00000563995 UBAP1LF5GYI3 381 aa30.31■■■□□ 2.44
SLX1A-204ENST00000563995 CAMSAP1Q5T5Y3 1602 aa30.31■■■□□ 2.44
SLX1A-204ENST00000563995 HNRNPMP52272 730 aaKnown RBP eCLIP30.3■■■□□ 2.44
SLX1A-204ENST00000563995 MYO3AQ8NEV4 1616 aa30.29■■■□□ 2.44
SLX1A-204ENST00000563995 ADGBQ8N7X0 1667 aa30.29■■■□□ 2.44
SLX1A-204ENST00000563995 ZMYM3Q14202 1370 aa30.28■■■□□ 2.44
SLX1A-204ENST00000563995 A2MP01023 1474 aa30.27■■■□□ 2.44
SLX1A-204ENST00000563995 MYOM3Q5VTT5 1437 aa30.26■■■□□ 2.43
SLX1A-204ENST00000563995 MIA2Q96PC5 1412 aa30.21■■■□□ 2.43
SLX1A-204ENST00000563995 CEP170BQ9Y4F5 1589 aaPredicted RBP30.2■■■□□ 2.42
SLX1A-204ENST00000563995 PTPRKQ15262 1439 aa30.19■■■□□ 2.42
SLX1A-204ENST00000563995 ZNF644Q9H582 1327 aaPredicted RBP30.19■■■□□ 2.42
SLX1A-204ENST00000563995 MED1Q15648 1581 aaPredicted RBP30.18■■■□□ 2.42
SLX1A-204ENST00000563995 CAMSAP2Q08AD1 1489 aa30.18■■■□□ 2.42
SLX1A-204ENST00000563995 ZNF335Q9H4Z2 1342 aaPredicted RBP30.17■■■□□ 2.42
SLX1A-204ENST00000563995 PLA2R1Q13018 1463 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms