RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 MLECQ14165 292 aa34.32■■■■□ 3.08
HERC2-204ENST00000563945 ARHGAP35Q9NRY4 1499 aa34.32■■■■□ 3.08
HERC2-204ENST00000563945 RIMS1Q86UR5 1692 aaKnown RBP34.3■■■■□ 3.08
HERC2-204ENST00000563945 YEATS2Q9ULM3 1422 aa34.3■■■■□ 3.08
HERC2-204ENST00000563945 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
HERC2-204ENST00000563945 CLIP1P30622 1438 aa34.24■■■■□ 3.07
HERC2-204ENST00000563945 FBXO41Q8TF61 875 aa34.23■■■■□ 3.07
HERC2-204ENST00000563945 MYT1LQ9UL68 1186 aa34.23■■■■□ 3.07
HERC2-204ENST00000563945 MYO5CQ9NQX4 1742 aa34.21■■■■□ 3.07
HERC2-204ENST00000563945 LMTK3Q96Q04 1460 aa34.2■■■■□ 3.07
HERC2-204ENST00000563945 TROQ12816 1431 aaPredicted RBP34.2■■■■□ 3.06
HERC2-204ENST00000563945 ATP10AO60312 1499 aa34.18■■■■□ 3.06
HERC2-204ENST00000563945 KIF14Q15058 1648 aa34.18■■■■□ 3.06
HERC2-204ENST00000563945 ARHGAP5Q13017 1502 aa34.14■■■■□ 3.06
HERC2-204ENST00000563945 HSPA2P54652 639 aa34.14■■■■□ 3.06
HERC2-204ENST00000563945 C9orf84Q5VXU9 1444 aa34.12■■■■□ 3.05
HERC2-204ENST00000563945 ZNF518AQ6AHZ1 1483 aa34.1■■■■□ 3.05
HERC2-204ENST00000563945 AFAP1Q8N556 730 aa34.1■■■■□ 3.05
HERC2-204ENST00000563945 SIGLEC1Q9BZZ2 1709 aa34.08■■■■□ 3.05
HERC2-204ENST00000563945 FER1L4A9Z1Z3 1794 aa34.07■■■■□ 3.04
HERC2-204ENST00000563945 CASKIN1Q8WXD9 1431 aa34.01■■■■□ 3.03
HERC2-204ENST00000563945 CCDC18Q5T9S5 1454 aa34.01■■■■□ 3.03
HERC2-204ENST00000563945 ARHGEF12Q9NZN5 1544 aa33.99■■■■□ 3.03
HERC2-204ENST00000563945 CEBPAP49715 358 aaPredicted RBP33.97■■■■□ 3.03
HERC2-204ENST00000563945 LRRIQ1Q96JM4 1722 aa33.96■■■■□ 3.03
HERC2-204ENST00000563945 ESF1Q9H501 851 aaKnown RBP33.96■■■■□ 3.03
HERC2-204ENST00000563945 KDM5CP41229 1560 aa33.94■■■■□ 3.02
HERC2-204ENST00000563945 CDC42BPBQ9Y5S2 1711 aa33.91■■■■□ 3.02
HERC2-204ENST00000563945 MLH3Q9UHC1 1453 aa33.88■■■■□ 3.01
HERC2-204ENST00000563945 ZNF777Q9ULD5 760 aaPredicted RBP33.88■■■■□ 3.01
HERC2-204ENST00000563945 PREX2Q70Z35 1606 aa33.86■■■■□ 3.01
HERC2-204ENST00000563945 TRAPPC8Q9Y2L5 1435 aa33.86■■■■□ 3.01
HERC2-204ENST00000563945 DIP2CQ9Y2E4 1556 aa33.85■■■■□ 3.01
HERC2-204ENST00000563945 FYCO1Q9BQS8 1478 aa33.84■■■■□ 3.01
HERC2-204ENST00000563945 DMRT2Q9Y5R5 561 aa33.83■■■■□ 3.01
HERC2-204ENST00000563945 PREX1Q8TCU6 1659 aa33.83■■■■□ 3.01
HERC2-204ENST00000563945 CERKQ8TCT0 537 aa33.82■■■■□ 3
HERC2-204ENST00000563945 ABCC1P33527 1531 aa33.82■■■■□ 3
HERC2-204ENST00000563945 REREQ9P2R6 1566 aa33.81■■■■□ 3
HERC2-204ENST00000563945 UHRF1BP1Q6BDS2 1440 aa33.8■■■■□ 3
HERC2-204ENST00000563945 ABCA6Q8N139 1617 aa33.78■■■■□ 3
HERC2-204ENST00000563945 SETD1BQ9UPS6 1966 aaKnown RBP33.78■■■■□ 3
HERC2-204ENST00000563945 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
HERC2-204ENST00000563945 AGLP35573 1532 aa33.74■■■□□ 2.99
HERC2-204ENST00000563945 CDC42BPAQ5VT25 1732 aa33.74■■■□□ 2.99
HERC2-204ENST00000563945 SPAG9O60271 1321 aaKnown RBP33.72■■■□□ 2.99
HERC2-204ENST00000563945 HNRNPMP52272 730 aaKnown RBP eCLIP33.71■■■□□ 2.99
HERC2-204ENST00000563945 CFDP1Q9UEE9 299 aaPredicted RBP33.71■■■□□ 2.99
HERC2-204ENST00000563945 GPATCH8Q9UKJ3 1502 aaKnown RBP33.68■■■□□ 2.98
HERC2-204ENST00000563945 CCNB3Q8WWL7 1395 aa33.67■■■□□ 2.98
HERC2-204ENST00000563945 CNTLNQ9NXG0 1405 aa33.67■■■□□ 2.98
HERC2-204ENST00000563945 KIDINS220Q9ULH0 1771 aa33.67■■■□□ 2.98
HERC2-204ENST00000563945 MTUS2Q5JR59 1369 aa33.65■■■□□ 2.98
HERC2-204ENST00000563945 SAMD9LQ8IVG5 1584 aa33.64■■■□□ 2.98
HERC2-204ENST00000563945 C3P01024 1663 aa33.63■■■□□ 2.97
HERC2-204ENST00000563945 SYCP2Q9BX26 1530 aa33.63■■■□□ 2.97
HERC2-204ENST00000563945 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
HERC2-204ENST00000563945 KIAA1107Q9UPP5 1409 aa33.58■■■□□ 2.97
HERC2-204ENST00000563945 STRCQ7RTU9 1775 aa33.57■■■□□ 2.96
HERC2-204ENST00000563945 ZMYM3Q14202 1370 aa33.52■■■□□ 2.96
HERC2-204ENST00000563945 PTPRTO14522 1441 aa33.52■■■□□ 2.96
HERC2-204ENST00000563945 ATP7AQ04656 1500 aa33.51■■■□□ 2.95
HERC2-204ENST00000563945 GGT6Q6P531 493 aa33.5■■■□□ 2.95
HERC2-204ENST00000563945 SUPT6HQ7KZ85 1726 aaKnown RBP33.5■■■□□ 2.95
HERC2-204ENST00000563945 A2MP01023 1474 aa33.49■■■□□ 2.95
HERC2-204ENST00000563945 NPATQ14207 1427 aa33.47■■■□□ 2.95
HERC2-204ENST00000563945 MROH2AA6NES4 1674 aa33.44■■■□□ 2.94
HERC2-204ENST00000563945 ZNF644Q9H582 1327 aaPredicted RBP33.43■■■□□ 2.94
HERC2-204ENST00000563945 PPP6R1Q9UPN7 881 aa33.41■■■□□ 2.94
HERC2-204ENST00000563945 INO80Q9ULG1 1556 aaPredicted RBP33.41■■■□□ 2.94
HERC2-204ENST00000563945 EHBP1L1Q8N3D4 1523 aa33.39■■■□□ 2.94
HERC2-204ENST00000563945 NCOA1Q15788 1441 aa33.39■■■□□ 2.94
HERC2-204ENST00000563945 CEP162Q5TB80 1403 aa33.36■■■□□ 2.93
HERC2-204ENST00000563945 CLTCQ00610 1675 aaKnown RBP33.36■■■□□ 2.93
HERC2-204ENST00000563945 PLXNC1O60486 1568 aa33.35■■■□□ 2.93
HERC2-204ENST00000563945 CAMSAP1Q5T5Y3 1602 aa33.35■■■□□ 2.93
HERC2-204ENST00000563945 TIAM1Q13009 1591 aa33.34■■■□□ 2.93
HERC2-204ENST00000563945 NCKAP5LQ9HCH0 1330 aa33.32■■■□□ 2.93
HERC2-204ENST00000563945 ADGBQ8N7X0 1667 aa33.32■■■□□ 2.92
HERC2-204ENST00000563945 RTEL1-TNFRSF6BF6WH68 1400 aa33.3■■■□□ 2.92
HERC2-204ENST00000563945 MBD5Q9P267 1494 aa33.3■■■□□ 2.92
HERC2-204ENST00000563945 RSPH4AQ5TD94 716 aa33.29■■■□□ 2.92
HERC2-204ENST00000563945 PTPRKQ15262 1439 aa33.28■■■□□ 2.92
HERC2-204ENST00000563945 PKD2Q13563 968 aa33.28■■■□□ 2.92
HERC2-204ENST00000563945 DHX29Q7Z478 1369 aaKnown RBP33.27■■■□□ 2.92
HERC2-204ENST00000563945 KIF3BO15066 747 aa33.25■■■□□ 2.91
HERC2-204ENST00000563945 LTBP4Q8N2S1 1624 aa33.22■■■□□ 2.91
HERC2-204ENST00000563945 NCOA2Q15596 1464 aa33.21■■■□□ 2.91
HERC2-204ENST00000563945 TSPY4P0CV99 314 aa33.21■■■□□ 2.91
HERC2-204ENST00000563945 TSPY10P0CW01 314 aa33.21■■■□□ 2.91
HERC2-204ENST00000563945 CCDC141Q6ZP82 1450 aa33.2■■■□□ 2.91
HERC2-204ENST00000563945 MYO3AQ8NEV4 1616 aa33.2■■■□□ 2.9
HERC2-204ENST00000563945 DISP3Q9P2K9 1392 aa33.2■■■□□ 2.9
HERC2-204ENST00000563945 IQSEC2Q5JU85 1478 aa33.19■■■□□ 2.9
HERC2-204ENST00000563945 PLA2R1Q13018 1463 aa33.18■■■□□ 2.9
HERC2-204ENST00000563945 CEP170BQ9Y4F5 1589 aaPredicted RBP33.18■■■□□ 2.9
HERC2-204ENST00000563945 ZNF335Q9H4Z2 1342 aaPredicted RBP33.16■■■□□ 2.9
HERC2-204ENST00000563945 WASHC2CQ9Y4E1 1318 aa33.16■■■□□ 2.9
HERC2-204ENST00000563945 CAMSAP2Q08AD1 1489 aa33.16■■■□□ 2.9
HERC2-204ENST00000563945 ZNF142P52746 1687 aaPredicted RBP33.16■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms