RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 ZFYVE16Q7Z3T8 1539 aa28.41■■■□□ 2.14
MAP1LC3B-204ENST00000563720 ZMYM4Q5VZL5 1548 aa28.4■■■□□ 2.14
MAP1LC3B-204ENST00000563720 YEATS2Q9ULM3 1422 aa28.4■■■□□ 2.14
MAP1LC3B-204ENST00000563720 MLECQ14165 292 aa28.39■■■□□ 2.14
MAP1LC3B-204ENST00000563720 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
MAP1LC3B-204ENST00000563720 KIF14Q15058 1648 aa28.35■■■□□ 2.13
MAP1LC3B-204ENST00000563720 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
MAP1LC3B-204ENST00000563720 CASKIN1Q8WXD9 1431 aa28.35■■■□□ 2.13
MAP1LC3B-204ENST00000563720 CLIP1P30622 1438 aa28.33■■■□□ 2.13
MAP1LC3B-204ENST00000563720 SCAPERQ9BY12 1400 aa28.32■■■□□ 2.12
MAP1LC3B-204ENST00000563720 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
MAP1LC3B-204ENST00000563720 CDK11AQ9UQ88 783 aaPredicted RBP28.31■■■□□ 2.12
MAP1LC3B-204ENST00000563720 TROQ12816 1431 aaPredicted RBP28.3■■■□□ 2.12
MAP1LC3B-204ENST00000563720 PLCH2O75038 1416 aa28.29■■■□□ 2.12
MAP1LC3B-204ENST00000563720 CERKQ8TCT0 537 aa28.29■■■□□ 2.12
MAP1LC3B-204ENST00000563720 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
MAP1LC3B-204ENST00000563720 FER1L4A9Z1Z3 1794 aa28.26■■■□□ 2.11
MAP1LC3B-204ENST00000563720 FYCO1Q9BQS8 1478 aa28.26■■■□□ 2.11
MAP1LC3B-204ENST00000563720 ATP10AO60312 1499 aa28.23■■■□□ 2.11
MAP1LC3B-204ENST00000563720 EFCAB2Q5VUJ9 269 aa28.22■■■□□ 2.11
MAP1LC3B-204ENST00000563720 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
MAP1LC3B-204ENST00000563720 CDC42BPBQ9Y5S2 1711 aa28.19■■■□□ 2.1
MAP1LC3B-204ENST00000563720 ARHGEF12Q9NZN5 1544 aa28.18■■■□□ 2.1
MAP1LC3B-204ENST00000563720 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
MAP1LC3B-204ENST00000563720 ARHGAP5Q13017 1502 aa28.13■■■□□ 2.09
MAP1LC3B-204ENST00000563720 MYT1LQ9UL68 1186 aa28.13■■■□□ 2.09
MAP1LC3B-204ENST00000563720 PREX2Q70Z35 1606 aa28.13■■■□□ 2.09
MAP1LC3B-204ENST00000563720 CDC42BPAQ5VT25 1732 aa28.12■■■□□ 2.09
MAP1LC3B-204ENST00000563720 PREX1Q8TCU6 1659 aa28.11■■■□□ 2.09
MAP1LC3B-204ENST00000563720 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
MAP1LC3B-204ENST00000563720 ZNF518AQ6AHZ1 1483 aa28.1■■■□□ 2.09
MAP1LC3B-204ENST00000563720 DMRT2Q9Y5R5 561 aa28.09■■■□□ 2.09
MAP1LC3B-204ENST00000563720 AFAP1Q8N556 730 aa28.08■■■□□ 2.09
MAP1LC3B-204ENST00000563720 UHRF1BP1Q6BDS2 1440 aa28.06■■■□□ 2.08
MAP1LC3B-204ENST00000563720 KDM5CP41229 1560 aa28.02■■■□□ 2.08
MAP1LC3B-204ENST00000563720 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
MAP1LC3B-204ENST00000563720 ABCC1P33527 1531 aa27.99■■■□□ 2.07
MAP1LC3B-204ENST00000563720 ESF1Q9H501 851 aaKnown RBP27.98■■■□□ 2.07
MAP1LC3B-204ENST00000563720 STRCQ7RTU9 1775 aa27.97■■■□□ 2.07
MAP1LC3B-204ENST00000563720 DIP2CQ9Y2E4 1556 aa27.97■■■□□ 2.07
MAP1LC3B-204ENST00000563720 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
MAP1LC3B-204ENST00000563720 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
MAP1LC3B-204ENST00000563720 SETD1BQ9UPS6 1966 aaKnown RBP27.95■■■□□ 2.06
MAP1LC3B-204ENST00000563720 GPATCH8Q9UKJ3 1502 aaKnown RBP27.93■■■□□ 2.06
MAP1LC3B-204ENST00000563720 REREQ9P2R6 1566 aa27.93■■■□□ 2.06
MAP1LC3B-204ENST00000563720 SAMD9LQ8IVG5 1584 aa27.92■■■□□ 2.06
MAP1LC3B-204ENST00000563720 MLH3Q9UHC1 1453 aa27.92■■■□□ 2.06
MAP1LC3B-204ENST00000563720 ABCA6Q8N139 1617 aa27.9■■■□□ 2.06
MAP1LC3B-204ENST00000563720 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
MAP1LC3B-204ENST00000563720 EHBP1L1Q8N3D4 1523 aa27.89■■■□□ 2.06
MAP1LC3B-204ENST00000563720 PTPRTO14522 1441 aa27.89■■■□□ 2.06
MAP1LC3B-204ENST00000563720 TRAPPC8Q9Y2L5 1435 aa27.89■■■□□ 2.06
MAP1LC3B-204ENST00000563720 C3P01024 1663 aa27.87■■■□□ 2.05
MAP1LC3B-204ENST00000563720 AGLP35573 1532 aa27.87■■■□□ 2.05
MAP1LC3B-204ENST00000563720 ILDR2Q71H61 639 aa27.86■■■□□ 2.05
MAP1LC3B-204ENST00000563720 KIDINS220Q9ULH0 1771 aa27.84■■■□□ 2.05
MAP1LC3B-204ENST00000563720 TIAM1Q13009 1591 aa27.84■■■□□ 2.05
MAP1LC3B-204ENST00000563720 SYCP2Q9BX26 1530 aa27.83■■■□□ 2.05
MAP1LC3B-204ENST00000563720 CCNB3Q8WWL7 1395 aa27.83■■■□□ 2.05
MAP1LC3B-204ENST00000563720 ZNF777Q9ULD5 760 aaPredicted RBP27.81■■■□□ 2.04
MAP1LC3B-204ENST00000563720 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
MAP1LC3B-204ENST00000563720 VPS8Q8N3P4 1428 aa27.8■■■□□ 2.04
MAP1LC3B-204ENST00000563720 SOCS7O14512 581 aa27.79■■■□□ 2.04
MAP1LC3B-204ENST00000563720 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
MAP1LC3B-204ENST00000563720 CFDP1Q9UEE9 299 aaPredicted RBP27.77■■■□□ 2.04
MAP1LC3B-204ENST00000563720 PLEKHH2Q8IVE3 1493 aa27.76■■■□□ 2.03
MAP1LC3B-204ENST00000563720 NCOA1Q15788 1441 aa27.75■■■□□ 2.03
MAP1LC3B-204ENST00000563720 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
MAP1LC3B-204ENST00000563720 LTBP4Q8N2S1 1624 aa27.74■■■□□ 2.03
MAP1LC3B-204ENST00000563720 HNRNPMP52272 730 aaKnown RBP eCLIP27.72■■■□□ 2.03
MAP1LC3B-204ENST00000563720 NCOA2Q15596 1464 aa27.7■■■□□ 2.03
MAP1LC3B-204ENST00000563720 SPATA31D1Q6ZQQ2 1576 aa27.7■■■□□ 2.03
MAP1LC3B-204ENST00000563720 INO80Q9ULG1 1556 aaPredicted RBP27.7■■■□□ 2.03
MAP1LC3B-204ENST00000563720 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.02
MAP1LC3B-204ENST00000563720 NPATQ14207 1427 aa27.69■■■□□ 2.02
MAP1LC3B-204ENST00000563720 SPAG9O60271 1321 aaKnown RBP27.68■■■□□ 2.02
MAP1LC3B-204ENST00000563720 ATP7AQ04656 1500 aa27.68■■■□□ 2.02
MAP1LC3B-204ENST00000563720 ZMYM3Q14202 1370 aa27.68■■■□□ 2.02
MAP1LC3B-204ENST00000563720 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
MAP1LC3B-204ENST00000563720 ZNF644Q9H582 1327 aaPredicted RBP27.66■■■□□ 2.02
MAP1LC3B-204ENST00000563720 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
MAP1LC3B-204ENST00000563720 MAP3K1Q13233 1512 aa27.65■■■□□ 2.02
MAP1LC3B-204ENST00000563720 MROH2AA6NES4 1674 aa27.65■■■□□ 2.02
MAP1LC3B-204ENST00000563720 NCKAP5LQ9HCH0 1330 aa27.64■■■□□ 2.01
MAP1LC3B-204ENST00000563720 MBD5Q9P267 1494 aa27.64■■■□□ 2.01
MAP1LC3B-204ENST00000563720 ADGBQ8N7X0 1667 aa27.59■■■□□ 2.01
MAP1LC3B-204ENST00000563720 PLXNC1O60486 1568 aa27.59■■■□□ 2.01
MAP1LC3B-204ENST00000563720 ZNF335Q9H4Z2 1342 aaPredicted RBP27.59■■■□□ 2.01
MAP1LC3B-204ENST00000563720 CAMSAP2Q08AD1 1489 aa27.58■■■□□ 2.01
MAP1LC3B-204ENST00000563720 GGT6Q6P531 493 aa27.57■■■□□ 2
MAP1LC3B-204ENST00000563720 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
MAP1LC3B-204ENST00000563720 PKD2Q13563 968 aa27.56■■■□□ 2
MAP1LC3B-204ENST00000563720 A2MP01023 1474 aa27.55■■■□□ 2
MAP1LC3B-204ENST00000563720 CLTCQ00610 1675 aaKnown RBP27.55■■■□□ 2
MAP1LC3B-204ENST00000563720 KANK4Q5T7N3 995 aaPredicted RBP27.54■■■□□ 2
MAP1LC3B-204ENST00000563720 PLA2R1Q13018 1463 aa27.52■■■□□ 2
MAP1LC3B-204ENST00000563720 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
MAP1LC3B-204ENST00000563720 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
MAP1LC3B-204ENST00000563720 CCDC141Q6ZP82 1450 aa27.51■■□□□ 1.99
MAP1LC3B-204ENST00000563720 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms